RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 NISCHQ9Y2I1 1504 aa50.12■■■■■ 5.61
CACNB1-201ENST00000344140 CCDC180Q9P1Z9 1646 aa43.77■■■■■ 4.6
CACNB1-201ENST00000344140 ZCCHC6Q5VYS8 1495 aaKnown RBP42.09■■■■■ 4.33
CACNB1-201ENST00000344140 ABCC9O60706 1549 aa42.07■■■■■ 4.32
CACNB1-201ENST00000344140 DCAF1Q9Y4B6 1507 aa41.51■■■■■ 4.24
CACNB1-201ENST00000344140 DCAF8L2P0C7V8 631 aa41.38■■■■■ 4.22
CACNB1-201ENST00000344140 MYO15BQ96JP2 1530 aa41.08■■■■■ 4.17
CACNB1-201ENST00000344140 NACADO15069 1562 aa40.9■■■■■ 4.14
CACNB1-201ENST00000344140 RB1CC1Q8TDY2 1594 aa40.78■■■■■ 4.12
CACNB1-201ENST00000344140 SHROOM4Q9ULL8 1493 aa40.71■■■■■ 4.11
CACNB1-201ENST00000344140 SCRIBQ14160 1630 aa40.16■■■■■ 4.02
CACNB1-201ENST00000344140 UNC13AQ9UPW8 1703 aa39.87■■■■□ 3.97
CACNB1-201ENST00000344140 BICRAQ9NZM4 1560 aa39.47■■■■□ 3.91
CACNB1-201ENST00000344140 PABPN1Q86U42 306 aaKnown RBP eCLIP39.44■■■■□ 3.9
CACNB1-201ENST00000344140 SUPT5HO00267 1087 aaKnown RBP39.16■■■■□ 3.86
CACNB1-201ENST00000344140 CECR2Q9BXF3 1484 aa38.9■■■■□ 3.82
CACNB1-201ENST00000344140 RSF1Q96T23 1441 aaPredicted RBP38.84■■■■□ 3.81
CACNB1-201ENST00000344140 BAZ1AQ9NRL2 1556 aaPredicted RBP38.73■■■■□ 3.79
CACNB1-201ENST00000344140 MROH2BQ7Z745 1585 aa38.68■■■■□ 3.78
CACNB1-201ENST00000344140 SMARCA4P51532 1647 aa38.53■■■■□ 3.76
CACNB1-201ENST00000344140 EIF4G1Q04637 1599 aaKnown RBP38.41■■■■□ 3.74
CACNB1-201ENST00000344140 WIZO95785 1651 aa38.32■■■■□ 3.73
CACNB1-201ENST00000344140 PEG3Q9GZU2 1588 aa38.12■■■■□ 3.69
CACNB1-201ENST00000344140 CC2D2AQ9P2K1 1620 aa38.07■■■■□ 3.68
CACNB1-201ENST00000344140 TOP2AP11388 1531 aaKnown RBP38■■■■□ 3.67
CACNB1-201ENST00000344140 SMARCA2P51531 1590 aa37.97■■■■□ 3.67
CACNB1-201ENST00000344140 ATAD2BQ9ULI0 1458 aa37.95■■■■□ 3.67
CACNB1-201ENST00000344140 DNAJC5BQ9UF47 199 aa37.83■■■■□ 3.65
CACNB1-201ENST00000344140 BAZ1BQ9UIG0 1483 aaKnown RBP37.74■■■■□ 3.63
CACNB1-201ENST00000344140 NCAPD3P42695 1498 aa37.7■■■■□ 3.63
CACNB1-201ENST00000344140 HMGXB3Q12766 1538 aa37.61■■■■□ 3.61
CACNB1-201ENST00000344140 CCDC88BA6NC98 1476 aa37.6■■■■□ 3.61
CACNB1-201ENST00000344140 CHIC1Q5VXU3 224 aa37.46■■■■□ 3.59
CACNB1-201ENST00000344140 TRIM41Q8WV44 630 aa36.89■■■■□ 3.5
CACNB1-201ENST00000344140 CFTRP13569 1480 aa36.8■■■■□ 3.48
CACNB1-201ENST00000344140 ABCC8Q09428 1581 aa36.71■■■■□ 3.47
CACNB1-201ENST00000344140 CADPSQ9ULU8 1353 aa36.7■■■■□ 3.47
CACNB1-201ENST00000344140 LAMC3Q9Y6N6 1575 aa36.63■■■■□ 3.45
CACNB1-201ENST00000344140 NESP48681 1621 aa36.61■■■■□ 3.45
CACNB1-201ENST00000344140 WRNQ14191 1432 aaPredicted RBP eCLIP36.58■■■■□ 3.45
CACNB1-201ENST00000344140 PRDM2Q13029 1718 aa36.54■■■■□ 3.44
CACNB1-201ENST00000344140 PDS5BQ9NTI5 1447 aa36.37■■■■□ 3.41
CACNB1-201ENST00000344140 SYNJ1O43426 1573 aa36.36■■■■□ 3.41
CACNB1-201ENST00000344140 FANCD2Q9BXW9 1451 aa36.28■■■■□ 3.4
CACNB1-201ENST00000344140 TOP2BQ02880 1626 aa36.28■■■■□ 3.4
CACNB1-201ENST00000344140 KIF21AQ7Z4S6 1674 aa36.23■■■■□ 3.39
CACNB1-201ENST00000344140 ERCC6Q03468 1493 aa36.23■■■■□ 3.39
CACNB1-201ENST00000344140 BIVM-ERCC5R4GMW8 1640 aa36.22■■■■□ 3.39
CACNB1-201ENST00000344140 CUX1P39880 1505 aa36.18■■■■□ 3.38
CACNB1-201ENST00000344140 CEP164Q9UPV0 1460 aa36.17■■■■□ 3.38
CACNB1-201ENST00000344140 FAM9AQ8IZU1 332 aaPredicted RBP36.13■■■■□ 3.37
CACNB1-201ENST00000344140 EEA1Q15075 1411 aa36.06■■■■□ 3.36
CACNB1-201ENST00000344140 SOGA1O94964 1423 aa36.03■■■■□ 3.36
CACNB1-201ENST00000344140 LOC105371045A0A1W2PR82 267 aa35.97■■■■□ 3.35
CACNB1-201ENST00000344140 MRC2Q9UBG0 1479 aa35.94■■■■□ 3.34
CACNB1-201ENST00000344140 DNMBPQ6XZF7 1577 aa35.93■■■■□ 3.34
CACNB1-201ENST00000344140 THOC2Q8NI27 1593 aaKnown RBP35.87■■■■□ 3.33
CACNB1-201ENST00000344140 RUSC2Q8N2Y8 1516 aa35.86■■■■□ 3.33
CACNB1-201ENST00000344140 TOPBP1Q92547 1522 aa35.86■■■■□ 3.33
CACNB1-201ENST00000344140 URB2Q14146 1524 aaKnown RBP35.85■■■■□ 3.33
CACNB1-201ENST00000344140 CSRNP3Q8WYN3 585 aa35.82■■■■□ 3.33
CACNB1-201ENST00000344140 FGD5Q6ZNL6 1462 aa35.81■■■■□ 3.32
CACNB1-201ENST00000344140 WDR62O43379 1518 aa35.78■■■■□ 3.32
CACNB1-201ENST00000344140 KIF27Q86VH2 1401 aa35.69■■■■□ 3.3
CACNB1-201ENST00000344140 POLA1P09884 1462 aaPredicted RBP35.67■■■■□ 3.3
CACNB1-201ENST00000344140 CUX2O14529 1486 aa35.58■■■■□ 3.29
CACNB1-201ENST00000344140 EHMT2Q96KQ7 1210 aa35.56■■■■□ 3.28
CACNB1-201ENST00000344140 ABCA10Q8WWZ4 1543 aa35.54■■■■□ 3.28
CACNB1-201ENST00000344140 KIF21BO75037 1637 aa35.52■■■■□ 3.28
CACNB1-201ENST00000344140 RAD54L2Q9Y4B4 1467 aa35.52■■■■□ 3.28
CACNB1-201ENST00000344140 GOLGA3Q08378 1498 aa35.5■■■■□ 3.27
CACNB1-201ENST00000344140 PRXQ9BXM0 1461 aa35.4■■■■□ 3.26
CACNB1-201ENST00000344140 TNIKQ9UKE5 1360 aa35.38■■■■□ 3.25
CACNB1-201ENST00000344140 IFT140Q96RY7 1462 aa35.36■■■■□ 3.25
CACNB1-201ENST00000344140 IGF1RP08069 1367 aa35.36■■■■□ 3.25
CACNB1-201ENST00000344140 WDR97A6NE52 1622 aa35.36■■■■□ 3.25
CACNB1-201ENST00000344140 UBTFP17480 764 aaKnown RBP35.34■■■■□ 3.25
CACNB1-201ENST00000344140 ERICH3Q5RHP9 1530 aa35.33■■■■□ 3.25
CACNB1-201ENST00000344140 RAPGEF2Q9Y4G8 1499 aa35.31■■■■□ 3.24
CACNB1-201ENST00000344140 TARBP1Q13395 1621 aaKnown RBP35.31■■■■□ 3.24
CACNB1-201ENST00000344140 ABCA5Q8WWZ7 1642 aa35.22■■■■□ 3.23
CACNB1-201ENST00000344140 TDRD9Q8NDG6 1382 aaKnown RBP35.21■■■■□ 3.23
CACNB1-201ENST00000344140 CARMIL1Q5VZK9 1371 aa35.19■■■■□ 3.22
CACNB1-201ENST00000344140 GAPVD1Q14C86 1478 aa35.19■■■■□ 3.22
CACNB1-201ENST00000344140 CEP162Q5TB80 1403 aa35.15■■■■□ 3.22
CACNB1-201ENST00000344140 ZNF608Q9ULD9 1512 aaPredicted RBP35.13■■■■□ 3.22
CACNB1-201ENST00000344140 CUL7Q14999 1698 aa35.09■■■■□ 3.21
CACNB1-201ENST00000344140 EIF4G3O43432 1585 aaKnown RBP35.05■■■■□ 3.2
CACNB1-201ENST00000344140 AQRO60306 1485 aaKnown RBP eCLIP35.04■■■■□ 3.2
CACNB1-201ENST00000344140 GRIN2BQ13224 1484 aa34.94■■■■□ 3.18
CACNB1-201ENST00000344140 CLIP1P30622 1438 aa34.92■■■■□ 3.18
CACNB1-201ENST00000344140 PBRM1Q86U86 1689 aa34.92■■■■□ 3.18
CACNB1-201ENST00000344140 FHAD1B1AJZ9 1412 aa34.83■■■■□ 3.17
CACNB1-201ENST00000344140 ADAMTS12P58397 1594 aa34.77■■■■□ 3.16
CACNB1-201ENST00000344140 SNAPC4Q5SXM2 1469 aa34.76■■■■□ 3.15
CACNB1-201ENST00000344140 MAGI1Q96QZ7 1491 aaPredicted RBP34.72■■■■□ 3.15
CACNB1-201ENST00000344140 RANGAP1P46060 587 aaPredicted RBP34.71■■■■□ 3.15
CACNB1-201ENST00000344140 CTTNBP2Q8WZ74 1663 aa34.63■■■■□ 3.13
CACNB1-201ENST00000344140 VPS8Q8N3P4 1428 aa34.6■■■■□ 3.13
CACNB1-201ENST00000344140 ARHGAP35Q9NRY4 1499 aa34.58■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms