Protein–RNA interactions for Protein: O15371

EIF3D, Eukaryotic translation initiation factor 3 subunit D, humanhuman

Known RBP eCLIP

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3DO15371 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC8.06□□□□□ -1.125e-6■□□□□ 8.5
EIF3DO15371 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.382e-6■□□□□ 8.4
EIF3DO15371 ANKRD11-204ENST00000378332 1982 ntTSL 223.32■■□□□ 1.322e-6■□□□□ 8.4
EIF3DO15371 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0.012e-6■□□□□ 8.4
EIF3DO15371 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.012e-6■□□□□ 8.4
EIF3DO15371 ANKRD11-207ENST00000562816 573 ntTSL 412.03□□□□□ -0.482e-6■□□□□ 8.4
EIF3DO15371 SUB1-207ENST00000510442 580 ntTSL 321.21■□□□□ 0.993e-10■□□□□ 8.4
EIF3DO15371 SUB1-213ENST00000515355 771 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.413e-10■□□□□ 8.4
EIF3DO15371 SUB1-209ENST00000511615 1658 ntTSL 1 (best)10.36□□□□□ -0.753e-10■□□□□ 8.4
EIF3DO15371 SUB1-201ENST00000265073 3507 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.883e-10■□□□□ 8.4
EIF3DO15371 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.91□□□□□ -1.783e-10■□□□□ 8.4
EIF3DO15371 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.783e-10■□□□□ 8.4
EIF3DO15371 SUB1-212ENST00000513013 493 ntTSL 53.42□□□□□ -1.863e-10■□□□□ 8.4
EIF3DO15371 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.883e-10■□□□□ 8.4
EIF3DO15371 HUWE1-210ENST00000474971 598 ntTSL 23.16□□□□□ -1.93e-10■□□□□ 8.4
EIF3DO15371 BSG-209ENST00000574970 570 ntTSL 423.11■■□□□ 1.299e-8■□□□□ 8.4
EIF3DO15371 BSG-211ENST00000576984 544 ntTSL 420.94■□□□□ 0.949e-8■□□□□ 8.4
EIF3DO15371 BSG-208ENST00000573784 559 ntTSL 420.68■□□□□ 0.99e-8■□□□□ 8.4
EIF3DO15371 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.869e-8■□□□□ 8.4
EIF3DO15371 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.74■□□□□ 0.599e-8■□□□□ 8.4
EIF3DO15371 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.67■□□□□ 0.589e-8■□□□□ 8.4
EIF3DO15371 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.58■□□□□ 0.569e-8■□□□□ 8.4
EIF3DO15371 BSG-210ENST00000576925 611 ntTSL 218.16■□□□□ 0.59e-8■□□□□ 8.4
EIF3DO15371 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.08■□□□□ 0.499e-8■□□□□ 8.4
EIF3DO15371 BSG-207ENST00000573216 545 ntTSL 417.96■□□□□ 0.479e-8■□□□□ 8.4
EIF3DO15371 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.38■□□□□ 0.379e-8■□□□□ 8.4
EIF3DO15371 BSG-213ENST00000613627 689 ntTSL 317.23■□□□□ 0.359e-8■□□□□ 8.4
EIF3DO15371 BSG-206ENST00000572899 582 ntTSL 217.19■□□□□ 0.349e-8■□□□□ 8.4
EIF3DO15371 ASPSCR1-221ENST00000585274 984 ntTSL 519.57■□□□□ 0.726e-9■□□□□ 8.4
EIF3DO15371 DSTN-202ENST00000449141 795 ntTSL 315.67■□□□□ 0.16e-9■□□□□ 8.4
EIF3DO15371 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC15.57■□□□□ 0.086e-9■□□□□ 8.4
EIF3DO15371 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.176e-9■□□□□ 8.4
EIF3DO15371 RALGAPA2-204ENST00000430436 8769 ntTSL 59.28□□□□□ -0.922e-10■□□□□ 8.4
EIF3DO15371 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.342e-10■□□□□ 8.4
EIF3DO15371 MACF1-215ENST00000473843 598 ntTSL 211.4□□□□□ -0.586e-6■□□□□ 8.4
EIF3DO15371 NOP56-208ENST00000467857 735 ntTSL 210.13□□□□□ -0.792e-15■□□□□ 8.4
EIF3DO15371 NOP56-205ENST00000462630 859 ntTSL 29.56□□□□□ -0.882e-15■□□□□ 8.4
EIF3DO15371 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.11□□□□□ -1.751e-323■□□□□ 8.4
EIF3DO15371 MYL12A-212ENST00000608786 738 nt23.71■■□□□ 1.391e-7■□□□□ 8.4
EIF3DO15371 ERLIN1-201ENST00000370408 962 ntTSL 523.38■■□□□ 1.331e-7■□□□□ 8.4
EIF3DO15371 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.631e-7■□□□□ 8.4
EIF3DO15371 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.091e-7■□□□□ 8.4
EIF3DO15371 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC14.92□□□□□ -0.021e-7■□□□□ 8.4
EIF3DO15371 COA6-204ENST00000619305 697 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.571e-7■□□□□ 8.4
EIF3DO15371 SNRPD3-205ENST00000468770 544 ntTSL 1 (best)7.74□□□□□ -1.171e-7■□□□□ 8.4
EIF3DO15371 MT-TG-201ENST00000387429 68 ntBASIC1.54□□□□□ -2.162e-76■□□□□ 8.4
EIF3DO15371 BRD2-206ENST00000456339 887 ntTSL 416.04■□□□□ 0.162e-7■□□□□ 8.4
EIF3DO15371 BRD2-213ENST00000495733 3404 ntTSL 215.05■□□□□ 02e-7■□□□□ 8.4
EIF3DO15371 BRD2-219ENST00000607833 2338 ntAPPRIS ALT2 TSL 1 (best)13.96□□□□□ -0.172e-7■□□□□ 8.4
EIF3DO15371 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.951e-12■□□□□ 8.4
EIF3DO15371 TXNL1-206ENST00000587807 2035 ntTSL 217.3■□□□□ 0.361e-12■□□□□ 8.4
EIF3DO15371 TXNL1-208ENST00000589329 896 ntTSL 316.6■□□□□ 0.251e-12■□□□□ 8.4
EIF3DO15371 TXNL1-205ENST00000587613 934 ntTSL 314.53□□□□□ -0.081e-12■□□□□ 8.4
EIF3DO15371 TXNL1-201ENST00000217515 6894 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.551e-12■□□□□ 8.4
EIF3DO15371 TXNL1-204ENST00000586262 3541 ntTSL 1 (best)7.53□□□□□ -1.21e-12■□□□□ 8.4
EIF3DO15371 RBM6-202ENST00000419610 2128 ntTSL 222.26■■□□□ 1.151e-7■□□□□ 8.4
EIF3DO15371 PLXNB1-206ENST00000462738 663 ntTSL 221.88■■□□□ 1.095e-9■□□□□ 8.4
EIF3DO15371 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.65■■□□□ 1.061e-7■□□□□ 8.4
EIF3DO15371 PLXNB1-217ENST00000484485 560 ntTSL 419.64■□□□□ 0.735e-9■□□□□ 8.4
EIF3DO15371 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.25■□□□□ 0.511e-7■□□□□ 8.4
EIF3DO15371 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.011e-7■□□□□ 8.4
EIF3DO15371 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC15.09■□□□□ 0.011e-7■□□□□ 8.4
EIF3DO15371 RBM6-213ENST00000454079 4324 ntTSL 212.95□□□□□ -0.341e-7■□□□□ 8.4
EIF3DO15371 USP34-206ENST00000460004 572 ntTSL 48.26□□□□□ -1.093e-7■□□□□ 8.4
EIF3DO15371 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.223e-7■□□□□ 8.4
EIF3DO15371 RBM6-207ENST00000434592 2342 ntTSL 26.96□□□□□ -1.291e-7■□□□□ 8.4
EIF3DO15371 SF3B1-209ENST00000479532 587 ntTSL 26.73□□□□□ -1.333e-7■□□□□ 8.4
EIF3DO15371 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.94□□□□□ -1.941e-7■□□□□ 8.4
EIF3DO15371 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.28■■■□□ 2.124e-7■□□□□ 8.3
EIF3DO15371 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.98■■■□□ 2.074e-7■□□□□ 8.3
EIF3DO15371 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.964e-7■□□□□ 8.3
EIF3DO15371 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC25.97■■□□□ 1.754e-7■□□□□ 8.3
EIF3DO15371 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.44e-7■□□□□ 8.3
EIF3DO15371 AP1G1-220ENST00000570017 814 ntTSL 422.13■■□□□ 1.134e-7■□□□□ 8.3
EIF3DO15371 LAMA5-212ENST00000495695 780 ntTSL 221.1■□□□□ 0.972e-11■□□□□ 8.3
EIF3DO15371 AP1G1-215ENST00000568327 1724 ntTSL 520.65■□□□□ 0.94e-7■□□□□ 8.3
EIF3DO15371 AP1G1-214ENST00000567583 606 ntTSL 220.26■□□□□ 0.834e-7■□□□□ 8.3
EIF3DO15371 AP1G1-209ENST00000565161 574 ntTSL 420.13■□□□□ 0.814e-7■□□□□ 8.3
EIF3DO15371 AL136531.2-201ENST00000618770 1164 ntTSL 220.12■□□□□ 0.814e-7■□□□□ 8.3
EIF3DO15371 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.31■□□□□ 0.684e-7■□□□□ 8.3
EIF3DO15371 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.544e-7■□□□□ 8.3
EIF3DO15371 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.374e-7■□□□□ 8.3
EIF3DO15371 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.364e-7■□□□□ 8.3
EIF3DO15371 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.274e-7■□□□□ 8.3
EIF3DO15371 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC15.15■□□□□ 0.024e-7■□□□□ 8.3
EIF3DO15371 MCMBP-205ENST00000569515 499 ntTSL 515.04■□□□□ -04e-7■□□□□ 8.3
EIF3DO15371 AP1G1-208ENST00000565009 2494 ntTSL 514.97□□□□□ -0.014e-7■□□□□ 8.3
EIF3DO15371 TMCO1-205ENST00000476143 581 ntTSL 314.92□□□□□ -0.024e-7■□□□□ 8.3
EIF3DO15371 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC13.72□□□□□ -0.214e-7■□□□□ 8.3
EIF3DO15371 FKBP1A-209ENST00000612074 409 ntTSL 213.57□□□□□ -0.244e-7■□□□□ 8.3
EIF3DO15371 TMCO1-202ENST00000392129 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.244e-7■□□□□ 8.3
EIF3DO15371 FKBP1A-201ENST00000381715 705 ntTSL 2 BASIC13.2□□□□□ -0.34e-7■□□□□ 8.3
EIF3DO15371 AP1G1-218ENST00000569748 4554 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.344e-7■□□□□ 8.3
EIF3DO15371 AP1G1-212ENST00000566161 989 ntTSL 412.93□□□□□ -0.344e-7■□□□□ 8.3
EIF3DO15371 RBM25-202ENST00000525161 541 ntTSL 412.74□□□□□ -0.374e-7■□□□□ 8.3
EIF3DO15371 TMCO1-204ENST00000465705 760 ntTSL 512.35□□□□□ -0.434e-7■□□□□ 8.3
EIF3DO15371 RBM25-209ENST00000531500 1039 ntTSL 312.11□□□□□ -0.474e-7■□□□□ 8.3
EIF3DO15371 RBM25-203ENST00000525321 2470 ntTSL 1 (best) BASIC11.74□□□□□ -0.534e-7■□□□□ 8.3
EIF3DO15371 TMCO1-201ENST00000367881 2224 ntTSL 1 (best) BASIC11.56□□□□□ -0.564e-7■□□□□ 8.3
EIF3DO15371 TMCO1-209ENST00000628579 477 ntTSL 5 BASIC11.33□□□□□ -0.64e-7■□□□□ 8.3
Retrieved 100 of 4,069 protein–RNA pairs in 17.6 ms