RNA–Protein interactions for RNA: ENST00000587613.1

TXNL1-205, Transcript of thioredoxin like 1, humanhuman

TSL 3

Gene TXNL1, Length 934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TXNL1-205ENST00000587613 NISCHQ9Y2I1 1504 aa34.09■■■■□ 3.05
TXNL1-205ENST00000587613 ABCC9O60706 1549 aa30.76■■■□□ 2.51
TXNL1-205ENST00000587613 CCDC180Q9P1Z9 1646 aa30.65■■■□□ 2.5
TXNL1-205ENST00000587613 RB1CC1Q8TDY2 1594 aa29.24■■■□□ 2.27
TXNL1-205ENST00000587613 NACADO15069 1562 aa28.99■■■□□ 2.23
TXNL1-205ENST00000587613 DCAF8L2P0C7V8 631 aa28.98■■■□□ 2.23
TXNL1-205ENST00000587613 DNAJC5BQ9UF47 199 aa28.82■■■□□ 2.2
TXNL1-205ENST00000587613 PABPN1Q86U42 306 aaKnown RBP eCLIP28.63■■■□□ 2.17
TXNL1-205ENST00000587613 UNC13AQ9UPW8 1703 aa28.54■■■□□ 2.16
TXNL1-205ENST00000587613 MYO15BQ96JP2 1530 aa28.5■■■□□ 2.15
TXNL1-205ENST00000587613 BICRAQ9NZM4 1560 aa28.3■■■□□ 2.12
TXNL1-205ENST00000587613 ZCCHC6Q5VYS8 1495 aaKnown RBP28.22■■■□□ 2.11
TXNL1-205ENST00000587613 DCAF1Q9Y4B6 1507 aa28.13■■■□□ 2.09
TXNL1-205ENST00000587613 SCRIBQ14160 1630 aa27.97■■■□□ 2.07
TXNL1-205ENST00000587613 SHROOM4Q9ULL8 1493 aa27.95■■■□□ 2.06
TXNL1-205ENST00000587613 CC2D2AQ9P2K1 1620 aa27.76■■■□□ 2.03
TXNL1-205ENST00000587613 CECR2Q9BXF3 1484 aa27.7■■■□□ 2.03
TXNL1-205ENST00000587613 EIF4G1Q04637 1599 aaKnown RBP27.67■■■□□ 2.02
TXNL1-205ENST00000587613 NCAPD3P42695 1498 aa26.73■■□□□ 1.87
TXNL1-205ENST00000587613 ATAD2BQ9ULI0 1458 aa26.65■■□□□ 1.86
TXNL1-205ENST00000587613 SMARCA4P51532 1647 aa26.63■■□□□ 1.85
TXNL1-205ENST00000587613 ERCC6Q03468 1493 aa26.62■■□□□ 1.85
TXNL1-205ENST00000587613 SMARCA2P51531 1590 aa26.62■■□□□ 1.85
TXNL1-205ENST00000587613 DNAJC5Q9H3Z4 198 aa26.56■■□□□ 1.84
TXNL1-205ENST00000587613 HMGXB3Q12766 1538 aa26.55■■□□□ 1.84
TXNL1-205ENST00000587613 CUX2O14529 1486 aa26.51■■□□□ 1.83
TXNL1-205ENST00000587613 BAZ1AQ9NRL2 1556 aaPredicted RBP26.5■■□□□ 1.83
TXNL1-205ENST00000587613 BAZ1BQ9UIG0 1483 aaKnown RBP26.45■■□□□ 1.82
TXNL1-205ENST00000587613 NESP48681 1621 aa26.36■■□□□ 1.81
TXNL1-205ENST00000587613 PEG3Q9GZU2 1588 aa26.32■■□□□ 1.8
TXNL1-205ENST00000587613 MROH2BQ7Z745 1585 aa26.26■■□□□ 1.79
TXNL1-205ENST00000587613 LAMC3Q9Y6N6 1575 aa26.19■■□□□ 1.78
TXNL1-205ENST00000587613 THOC2Q8NI27 1593 aaKnown RBP26.1■■□□□ 1.77
TXNL1-205ENST00000587613 PDS5BQ9NTI5 1447 aa26.07■■□□□ 1.76
TXNL1-205ENST00000587613 KIF21AQ7Z4S6 1674 aa26.05■■□□□ 1.76
TXNL1-205ENST00000587613 WIZO95785 1651 aa25.98■■□□□ 1.75
TXNL1-205ENST00000587613 CADPSQ9ULU8 1353 aa25.95■■□□□ 1.74
TXNL1-205ENST00000587613 MRC2Q9UBG0 1479 aa25.83■■□□□ 1.73
TXNL1-205ENST00000587613 WDR62O43379 1518 aa25.73■■□□□ 1.71
TXNL1-205ENST00000587613 CEP164Q9UPV0 1460 aa25.73■■□□□ 1.71
TXNL1-205ENST00000587613 RSF1Q96T23 1441 aaPredicted RBP25.69■■□□□ 1.7
TXNL1-205ENST00000587613 FANCD2Q9BXW9 1451 aa25.67■■□□□ 1.7
TXNL1-205ENST00000587613 TOP2AP11388 1531 aaKnown RBP25.64■■□□□ 1.7
TXNL1-205ENST00000587613 CFTRP13569 1480 aa25.61■■□□□ 1.69
TXNL1-205ENST00000587613 TRIM41Q8WV44 630 aa25.49■■□□□ 1.67
TXNL1-205ENST00000587613 URB2Q14146 1524 aaKnown RBP25.43■■□□□ 1.66
TXNL1-205ENST00000587613 PRDM2Q13029 1718 aa25.4■■□□□ 1.66
TXNL1-205ENST00000587613 OSCARQ8IYS5 282 aa25.34■■□□□ 1.65
TXNL1-205ENST00000587613 CCDC88BA6NC98 1476 aa25.34■■□□□ 1.65
TXNL1-205ENST00000587613 IFT140Q96RY7 1462 aa25.2■■□□□ 1.62
TXNL1-205ENST00000587613 TOPBP1Q92547 1522 aa25.17■■□□□ 1.62
TXNL1-205ENST00000587613 ZNF608Q9ULD9 1512 aaPredicted RBP25.14■■□□□ 1.62
TXNL1-205ENST00000587613 ABCC8Q09428 1581 aa25.14■■□□□ 1.61
TXNL1-205ENST00000587613 DNMBPQ6XZF7 1577 aa25.08■■□□□ 1.61
TXNL1-205ENST00000587613 EIF4G3O43432 1585 aaKnown RBP25.03■■□□□ 1.6
TXNL1-205ENST00000587613 RIMBP3CA6NJZ7 1639 aa24.98■■□□□ 1.59
TXNL1-205ENST00000587613 RIMBP3BA6NNM3 1639 aa24.98■■□□□ 1.59
TXNL1-205ENST00000587613 RIMBP3Q9UFD9 1639 aa24.98■■□□□ 1.59
TXNL1-205ENST00000587613 AQRO60306 1485 aaKnown RBP eCLIP24.92■■□□□ 1.582e-7■■□□□ 13.8
TXNL1-205ENST00000587613 TARBP1Q13395 1621 aaKnown RBP24.92■■□□□ 1.58
TXNL1-205ENST00000587613 POLA1P09884 1462 aaPredicted RBP24.89■■□□□ 1.58
TXNL1-205ENST00000587613 FBLN2P98095 1184 aa24.89■■□□□ 1.58
TXNL1-205ENST00000587613 ARHGEF11O15085 1522 aa24.89■■□□□ 1.57
TXNL1-205ENST00000587613 CHD1O14646 1710 aa24.87■■□□□ 1.57
TXNL1-205ENST00000587613 RAD54L2Q9Y4B4 1467 aa24.82■■□□□ 1.56
TXNL1-205ENST00000587613 SOGA1O94964 1423 aa24.81■■□□□ 1.56
TXNL1-205ENST00000587613 CYB5RLQ6IPT4 315 aa24.77■■□□□ 1.56
TXNL1-205ENST00000587613 TDRD9Q8NDG6 1382 aaKnown RBP24.77■■□□□ 1.56
TXNL1-205ENST00000587613 FGD5Q6ZNL6 1462 aa24.75■■□□□ 1.55
TXNL1-205ENST00000587613 WDR97A6NE52 1622 aa24.69■■□□□ 1.54
TXNL1-205ENST00000587613 CUX1P39880 1505 aa24.69■■□□□ 1.54
TXNL1-205ENST00000587613 SNAPC4Q5SXM2 1469 aa24.69■■□□□ 1.54
TXNL1-205ENST00000587613 CHMP7Q8WUX9 453 aaPredicted RBP24.65■■□□□ 1.54
TXNL1-205ENST00000587613 SUPT5HO00267 1087 aaKnown RBP24.63■■□□□ 1.53
TXNL1-205ENST00000587613 ARAP1Q96P48 1450 aa24.62■■□□□ 1.53
TXNL1-205ENST00000587613 GRIN2BQ13224 1484 aa24.61■■□□□ 1.53
TXNL1-205ENST00000587613 MAGI1Q96QZ7 1491 aaPredicted RBP24.6■■□□□ 1.53
TXNL1-205ENST00000587613 SYNJ1O43426 1573 aa24.59■■□□□ 1.53
TXNL1-205ENST00000587613 TRHP20396 242 aaPredicted RBP24.58■■□□□ 1.53
TXNL1-205ENST00000587613 PBRM1Q86U86 1689 aa24.53■■□□□ 1.52
TXNL1-205ENST00000587613 SYNJ2O15056 1496 aa24.52■■□□□ 1.52
TXNL1-205ENST00000587613 CLASP1Q7Z460 1538 aa24.52■■□□□ 1.52
TXNL1-205ENST00000587613 GAPVD1Q14C86 1478 aa24.51■■□□□ 1.51
TXNL1-205ENST00000587613 ABCA10Q8WWZ4 1543 aa24.44■■□□□ 1.5
TXNL1-205ENST00000587613 ABCA5Q8WWZ7 1642 aa24.41■■□□□ 1.5
TXNL1-205ENST00000587613 WRNQ14191 1432 aaPredicted RBP eCLIP24.37■■□□□ 1.49
TXNL1-205ENST00000587613 TOP2BQ02880 1626 aa24.29■■□□□ 1.48
TXNL1-205ENST00000587613 BIVM-ERCC5R4GMW8 1640 aa24.28■■□□□ 1.48
TXNL1-205ENST00000587613 GRIN2AQ12879 1464 aa24.27■■□□□ 1.48
TXNL1-205ENST00000587613 ADAMTS12P58397 1594 aa24.25■■□□□ 1.47
TXNL1-205ENST00000587613 FHAD1B1AJZ9 1412 aa24.18■■□□□ 1.46
TXNL1-205ENST00000587613 CEP170Q5SW79 1584 aa24.17■■□□□ 1.46
TXNL1-205ENST00000587613 NUP160Q12769 1436 aa24.16■■□□□ 1.46
TXNL1-205ENST00000587613 ERICH3Q5RHP9 1530 aa24.15■■□□□ 1.46
TXNL1-205ENST00000587613 ERCC6L2Q5T890 1561 aa24.14■■□□□ 1.45
TXNL1-205ENST00000587613 SHROOM2Q13796 1616 aa24.06■■□□□ 1.44
TXNL1-205ENST00000587613 PRG4Q92954 1404 aaPredicted RBP24■■□□□ 1.43
TXNL1-205ENST00000587613 JPH4Q96JJ6 628 aa23.97■■□□□ 1.43
TXNL1-205ENST00000587613 AEBP2Q6ZN18 517 aaPredicted RBP23.96■■□□□ 1.43
TXNL1-205ENST00000587613 RUSC2Q8N2Y8 1516 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms