RNA–Protein interactions for RNA: ENST00000476143.6

TMCO1-205, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 3

Gene TMCO1, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-205ENST00000476143 NISCHQ9Y2I1 1504 aa33.7■■■□□ 2.99
TMCO1-205ENST00000476143 CCDC180Q9P1Z9 1646 aa30.17■■■□□ 2.42
TMCO1-205ENST00000476143 ABCC9O60706 1549 aa29.71■■■□□ 2.35
TMCO1-205ENST00000476143 RB1CC1Q8TDY2 1594 aa28.54■■■□□ 2.16
TMCO1-205ENST00000476143 NACADO15069 1562 aa28.41■■■□□ 2.14
TMCO1-205ENST00000476143 DCAF8L2P0C7V8 631 aa28.37■■■□□ 2.13
TMCO1-205ENST00000476143 MYO15BQ96JP2 1530 aa28.13■■■□□ 2.09
TMCO1-205ENST00000476143 ZCCHC6Q5VYS8 1495 aaKnown RBP28.02■■■□□ 2.08
TMCO1-205ENST00000476143 DCAF1Q9Y4B6 1507 aa27.89■■■□□ 2.06
TMCO1-205ENST00000476143 UNC13AQ9UPW8 1703 aa27.81■■■□□ 2.04
TMCO1-205ENST00000476143 PABPN1Q86U42 306 aaKnown RBP eCLIP27.68■■■□□ 2.02
TMCO1-205ENST00000476143 BICRAQ9NZM4 1560 aa27.53■■■□□ 2
TMCO1-205ENST00000476143 SCRIBQ14160 1630 aa27.46■■□□□ 1.99
TMCO1-205ENST00000476143 SHROOM4Q9ULL8 1493 aa27.38■■□□□ 1.97
TMCO1-205ENST00000476143 DNAJC5BQ9UF47 199 aa27.36■■□□□ 1.97
TMCO1-205ENST00000476143 EIF4G1Q04637 1599 aaKnown RBP26.91■■□□□ 1.9
TMCO1-205ENST00000476143 CC2D2AQ9P2K1 1620 aa26.87■■□□□ 1.89
TMCO1-205ENST00000476143 CECR2Q9BXF3 1484 aa26.75■■□□□ 1.87
TMCO1-205ENST00000476143 SMARCA4P51532 1647 aa26.24■■□□□ 1.79
TMCO1-205ENST00000476143 BAZ1AQ9NRL2 1556 aaPredicted RBP26.21■■□□□ 1.79
TMCO1-205ENST00000476143 SMARCA2P51531 1590 aa26.17■■□□□ 1.78
TMCO1-205ENST00000476143 NCAPD3P42695 1498 aa26.17■■□□□ 1.78
TMCO1-205ENST00000476143 ATAD2BQ9ULI0 1458 aa26.13■■□□□ 1.77
TMCO1-205ENST00000476143 HMGXB3Q12766 1538 aa26.05■■□□□ 1.76
TMCO1-205ENST00000476143 BAZ1BQ9UIG0 1483 aaKnown RBP25.98■■□□□ 1.75
TMCO1-205ENST00000476143 PEG3Q9GZU2 1588 aa25.96■■□□□ 1.75
TMCO1-205ENST00000476143 MROH2BQ7Z745 1585 aa25.93■■□□□ 1.74
TMCO1-205ENST00000476143 ERCC6Q03468 1493 aa25.73■■□□□ 1.71
TMCO1-205ENST00000476143 WIZO95785 1651 aa25.68■■□□□ 1.7
TMCO1-205ENST00000476143 LAMC3Q9Y6N6 1575 aa25.58■■□□□ 1.69
TMCO1-205ENST00000476143 NESP48681 1621 aa25.58■■□□□ 1.69
TMCO1-205ENST00000476143 RSF1Q96T23 1441 aaPredicted RBP25.54■■□□□ 1.68
TMCO1-205ENST00000476143 CUX2O14529 1486 aa25.52■■□□□ 1.68
TMCO1-205ENST00000476143 PDS5BQ9NTI5 1447 aa25.44■■□□□ 1.66
TMCO1-205ENST00000476143 TOP2AP11388 1531 aaKnown RBP25.42■■□□□ 1.66
TMCO1-205ENST00000476143 CADPSQ9ULU8 1353 aa25.41■■□□□ 1.66
TMCO1-205ENST00000476143 KIF21AQ7Z4S6 1674 aa25.34■■□□□ 1.65
TMCO1-205ENST00000476143 THOC2Q8NI27 1593 aaKnown RBP25.3■■□□□ 1.64
TMCO1-205ENST00000476143 CFTRP13569 1480 aa25.18■■□□□ 1.62
TMCO1-205ENST00000476143 MRC2Q9UBG0 1479 aa25.16■■□□□ 1.62
TMCO1-205ENST00000476143 CEP164Q9UPV0 1460 aa25.16■■□□□ 1.62
TMCO1-205ENST00000476143 FANCD2Q9BXW9 1451 aa25.13■■□□□ 1.61
TMCO1-205ENST00000476143 CCDC88BA6NC98 1476 aa25.08■■□□□ 1.6
TMCO1-205ENST00000476143 PRDM2Q13029 1718 aa25.07■■□□□ 1.6
TMCO1-205ENST00000476143 WDR62O43379 1518 aa25.07■■□□□ 1.6
TMCO1-205ENST00000476143 DNAJC5Q9H3Z4 198 aa24.97■■□□□ 1.59
TMCO1-205ENST00000476143 URB2Q14146 1524 aaKnown RBP24.83■■□□□ 1.57
TMCO1-205ENST00000476143 SUPT5HO00267 1087 aaKnown RBP24.78■■□□□ 1.56
TMCO1-205ENST00000476143 ABCC8Q09428 1581 aa24.76■■□□□ 1.55
TMCO1-205ENST00000476143 TOPBP1Q92547 1522 aa24.68■■□□□ 1.54
TMCO1-205ENST00000476143 DNMBPQ6XZF7 1577 aa24.67■■□□□ 1.54
TMCO1-205ENST00000476143 IFT140Q96RY7 1462 aa24.64■■□□□ 1.53
TMCO1-205ENST00000476143 ZNF608Q9ULD9 1512 aaPredicted RBP24.45■■□□□ 1.51
TMCO1-205ENST00000476143 POLA1P09884 1462 aaPredicted RBP24.45■■□□□ 1.5
TMCO1-205ENST00000476143 EIF4G3O43432 1585 aaKnown RBP24.42■■□□□ 1.5
TMCO1-205ENST00000476143 OSCARQ8IYS5 282 aa24.41■■□□□ 1.5
TMCO1-205ENST00000476143 TARBP1Q13395 1621 aaKnown RBP24.4■■□□□ 1.5
TMCO1-205ENST00000476143 SOGA1O94964 1423 aa24.37■■□□□ 1.49
TMCO1-205ENST00000476143 FGD5Q6ZNL6 1462 aa24.37■■□□□ 1.49
TMCO1-205ENST00000476143 CUX1P39880 1505 aa24.35■■□□□ 1.49
TMCO1-205ENST00000476143 RAD54L2Q9Y4B4 1467 aa24.32■■□□□ 1.48
TMCO1-205ENST00000476143 WDR97A6NE52 1622 aa24.31■■□□□ 1.48
TMCO1-205ENST00000476143 AQRO60306 1485 aaKnown RBP eCLIP24.31■■□□□ 1.481e-7■■■■■ 30.4
TMCO1-205ENST00000476143 TDRD9Q8NDG6 1382 aaKnown RBP24.23■■□□□ 1.47
TMCO1-205ENST00000476143 FBLN2P98095 1184 aa24.18■■□□□ 1.46
TMCO1-205ENST00000476143 CHD1O14646 1710 aa24.18■■□□□ 1.46
TMCO1-205ENST00000476143 WRNQ14191 1432 aaPredicted RBP eCLIP24.17■■□□□ 1.46
TMCO1-205ENST00000476143 BIVM-ERCC5R4GMW8 1640 aa24.13■■□□□ 1.45
TMCO1-205ENST00000476143 GRIN2BQ13224 1484 aa24.13■■□□□ 1.45
TMCO1-205ENST00000476143 TOP2BQ02880 1626 aa24.13■■□□□ 1.45
TMCO1-205ENST00000476143 SNAPC4Q5SXM2 1469 aa24.12■■□□□ 1.45
TMCO1-205ENST00000476143 MAGI1Q96QZ7 1491 aaPredicted RBP24.12■■□□□ 1.45
TMCO1-205ENST00000476143 ABCA10Q8WWZ4 1543 aa24.11■■□□□ 1.45
TMCO1-205ENST00000476143 TRIM41Q8WV44 630 aa24.11■■□□□ 1.45
TMCO1-205ENST00000476143 GAPVD1Q14C86 1478 aa24.09■■□□□ 1.45
TMCO1-205ENST00000476143 PBRM1Q86U86 1689 aa24.08■■□□□ 1.45
TMCO1-205ENST00000476143 CHMP7Q8WUX9 453 aaPredicted RBP24.07■■□□□ 1.44
TMCO1-205ENST00000476143 SYNJ1O43426 1573 aa24.07■■□□□ 1.44
TMCO1-205ENST00000476143 ABCA5Q8WWZ7 1642 aa24.04■■□□□ 1.44
TMCO1-205ENST00000476143 SYNJ2O15056 1496 aa24.01■■□□□ 1.43
TMCO1-205ENST00000476143 RIMBP3CA6NJZ7 1639 aa24.01■■□□□ 1.43
TMCO1-205ENST00000476143 RIMBP3BA6NNM3 1639 aa24.01■■□□□ 1.43
TMCO1-205ENST00000476143 RIMBP3Q9UFD9 1639 aa24.01■■□□□ 1.43
TMCO1-205ENST00000476143 ARHGEF11O15085 1522 aa23.97■■□□□ 1.43
TMCO1-205ENST00000476143 ERICH3Q5RHP9 1530 aa23.85■■□□□ 1.41
TMCO1-205ENST00000476143 CLASP1Q7Z460 1538 aa23.85■■□□□ 1.41
TMCO1-205ENST00000476143 ADAMTS12P58397 1594 aa23.84■■□□□ 1.41
TMCO1-205ENST00000476143 FHAD1B1AJZ9 1412 aa23.81■■□□□ 1.4
TMCO1-205ENST00000476143 GRIN2AQ12879 1464 aa23.81■■□□□ 1.4
TMCO1-205ENST00000476143 CYB5RLQ6IPT4 315 aa23.79■■□□□ 1.4
TMCO1-205ENST00000476143 ARAP1Q96P48 1450 aa23.73■■□□□ 1.39
TMCO1-205ENST00000476143 KIF27Q86VH2 1401 aa23.72■■□□□ 1.39
TMCO1-205ENST00000476143 NUP160Q12769 1436 aa23.67■■□□□ 1.38
TMCO1-205ENST00000476143 CEP170Q5SW79 1584 aa23.66■■□□□ 1.38
TMCO1-205ENST00000476143 CUL7Q14999 1698 aa23.63■■□□□ 1.37
TMCO1-205ENST00000476143 AEBP2Q6ZN18 517 aaPredicted RBP23.57■■□□□ 1.36
TMCO1-205ENST00000476143 IGF1RP08069 1367 aa23.54■■□□□ 1.36
TMCO1-205ENST00000476143 SHROOM2Q13796 1616 aa23.54■■□□□ 1.36
TMCO1-205ENST00000476143 RUSC2Q8N2Y8 1516 aa23.5■■□□□ 1.35
TMCO1-205ENST00000476143 TRHP20396 242 aaPredicted RBP23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms