RNA–Protein interactions for RNA: ENST00000460004.1

USP34-206, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 4

Gene USP34, Length 572 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-206ENST00000460004 AEBP2Q6ZN18 517 aaPredicted RBP26.9■■□□□ 1.9
USP34-206ENST00000460004 CHIC1Q5VXU3 224 aa25.69■■□□□ 1.7
USP34-206ENST00000460004 SENP3Q9H4L4 574 aaPredicted RBP22.84■■□□□ 1.25
USP34-206ENST00000460004 PHF23Q9BUL5 403 aaPredicted RBP22.62■■□□□ 1.21
USP34-206ENST00000460004 FOXD1Q16676 465 aa21.31■■□□□ 1
USP34-206ENST00000460004 PLPPR3Q6T4P5 718 aa20.61■□□□□ 0.89
USP34-206ENST00000460004 PPP6R1Q9UPN7 881 aa20.12■□□□□ 0.81
USP34-206ENST00000460004 ADRA2BP18089 450 aa20.08■□□□□ 0.81
USP34-206ENST00000460004 PIAS4Q8N2W9 510 aaPredicted RBP19.97■□□□□ 0.79
USP34-206ENST00000460004 MSH5O43196 834 aa19.8■□□□□ 0.76
USP34-206ENST00000460004 POTEDQ86YR6 584 aa19.03■□□□□ 0.64
USP34-206ENST00000460004 MAPK8IP2Q13387 824 aaPredicted RBP18.39■□□□□ 0.53
USP34-206ENST00000460004 SCAF1Q9H7N4 1312 aaKnown RBP18.26■□□□□ 0.51
USP34-206ENST00000460004 DMRT2Q9Y5R5 561 aa18.15■□□□□ 0.5
USP34-206ENST00000460004 PPP4R3CPQ6ZMV5 832 aa18.13■□□□□ 0.49
USP34-206ENST00000460004 CNKSR2Q8WXI2 1034 aa17.71■□□□□ 0.43
USP34-206ENST00000460004 HOXD11P31277 338 aaPredicted RBP17.55■□□□□ 0.4
USP34-206ENST00000460004 DCAF8L1A6NGE4 600 aa17.48■□□□□ 0.39
USP34-206ENST00000460004 RNF216Q9NWF9 866 aaPredicted RBP17.48■□□□□ 0.39
USP34-206ENST00000460004 NCBP3Q53F19 620 aaKnown RBP17.45■□□□□ 0.38
USP34-206ENST00000460004 NPM3O75607 178 aaKnown RBP17.25■□□□□ 0.35
USP34-206ENST00000460004 KCNA4P22459 653 aa17.14■□□□□ 0.33
USP34-206ENST00000460004 NISCHQ9Y2I1 1504 aa16.98■□□□□ 0.31
USP34-206ENST00000460004 RNF39Q9H2S5 420 aa16.94■□□□□ 0.3
USP34-206ENST00000460004 CACNB1Q02641 598 aaPredicted RBP16.92■□□□□ 0.3
USP34-206ENST00000460004 DNAJC5BQ9UF47 199 aa16.83■□□□□ 0.28
USP34-206ENST00000460004 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.77■□□□□ 0.28
USP34-206ENST00000460004 C1QBPQ07021 282 aaKnown RBP16.68■□□□□ 0.26
USP34-206ENST00000460004 U3KPZ7 1027 aaPredicted RBP16.45■□□□□ 0.22
USP34-206ENST00000460004 SLC4A2P04920 1241 aa16.43■□□□□ 0.22
USP34-206ENST00000460004 SLC4A1APQ9BWU0 796 aaKnown RBP16.19■□□□□ 0.18
USP34-206ENST00000460004 SPINK5Q9NQ38 1064 aaPredicted RBP16.18■□□□□ 0.18
USP34-206ENST00000460004 CAPN15O75808 1086 aa16.13■□□□□ 0.17
USP34-206ENST00000460004 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.97■□□□□ 0.15
USP34-206ENST00000460004 HNRNPUL2Q1KMD3 747 aaKnown RBP15.97■□□□□ 0.15
USP34-206ENST00000460004 DSG3P32926 999 aa15.96■□□□□ 0.15
USP34-206ENST00000460004 TRHP20396 242 aaPredicted RBP15.94■□□□□ 0.14
USP34-206ENST00000460004 MYCNP04198 464 aaPredicted RBP15.92■□□□□ 0.14
USP34-206ENST00000460004 APLP2Q06481 763 aa15.92■□□□□ 0.14
USP34-206ENST00000460004 SAMD1Q6SPF0 538 aaPredicted RBP15.91■□□□□ 0.14
USP34-206ENST00000460004 FOXD4L1Q9NU39 408 aa15.88■□□□□ 0.13
USP34-206ENST00000460004 ZNF219Q9P2Y4 722 aaPredicted RBP15.83■□□□□ 0.12
USP34-206ENST00000460004 ABCB7O75027 752 aa15.81■□□□□ 0.12
USP34-206ENST00000460004 ZBTB22O15209 634 aa15.77■□□□□ 0.12
USP34-206ENST00000460004 ATF5Q9Y2D1 282 aaPredicted RBP15.61■□□□□ 0.09
USP34-206ENST00000460004 POLA2Q14181 598 aa15.53■□□□□ 0.08
USP34-206ENST00000460004 ATXN8OSP0DMR3 200 aa15.31■□□□□ 0.04
USP34-206ENST00000460004 CSRNP3Q8WYN3 585 aa15.22■□□□□ 0.03
USP34-206ENST00000460004 EHMT2Q96KQ7 1210 aa15.19■□□□□ 0.02
USP34-206ENST00000460004 RBM42Q9BTD8 480 aaKnown RBP15.17■□□□□ 0.02
USP34-206ENST00000460004 ZBTB12Q9Y330 459 aaPredicted RBP15.15■□□□□ 0.02
USP34-206ENST00000460004 OSCARQ8IYS5 282 aa15.04■□□□□ -0
USP34-206ENST00000460004 POTEHQ6S545 545 aa14.95□□□□□ -0.02
USP34-206ENST00000460004 CCDC180Q9P1Z9 1646 aa14.94□□□□□ -0.02
USP34-206ENST00000460004 FBLN2P98095 1184 aa14.91□□□□□ -0.02
USP34-206ENST00000460004 MKRN4PQ13434 485 aaPredicted RBP14.88□□□□□ -0.03
USP34-206ENST00000460004 AKT1S1Q96B36 256 aa14.88□□□□□ -0.03
USP34-206ENST00000460004 CHRDL2Q6WN34 429 aa14.79□□□□□ -0.04
USP34-206ENST00000460004 REM2Q8IYK8 340 aaPredicted RBP14.78□□□□□ -0.04
USP34-206ENST00000460004 SPDYE2BA6NHP3 402 aa14.73□□□□□ -0.05
USP34-206ENST00000460004 SPDYE6P0CI01 402 aa14.73□□□□□ -0.05
USP34-206ENST00000460004 SPDYE2Q495Y8 402 aa14.73□□□□□ -0.05
USP34-206ENST00000460004 PITPNM1O00562 1244 aa14.63□□□□□ -0.07
USP34-206ENST00000460004 ZNF692Q9BU19 519 aaPredicted RBP14.63□□□□□ -0.07
USP34-206ENST00000460004 SSUH2Q9Y2M2 353 aa14.57□□□□□ -0.08
USP34-206ENST00000460004 PIP4P2Q8N4L2 257 aa14.5□□□□□ -0.09
USP34-206ENST00000460004 CLEC11AQ9Y240 323 aa14.47□□□□□ -0.09
USP34-206ENST00000460004 FXR2P51116 673 aaKnown RBP eCLIP14.43□□□□□ -0.1
USP34-206ENST00000460004 PABPN1Q86U42 306 aaKnown RBP eCLIP14.43□□□□□ -0.1
USP34-206ENST00000460004 SPDYE1Q8NFV5 336 aaPredicted RBP14.43□□□□□ -0.1
USP34-206ENST00000460004 SPDYE4A6NLX3 237 aa14.27□□□□□ -0.13
USP34-206ENST00000460004 ZCCHC6Q5VYS8 1495 aaKnown RBP14.26□□□□□ -0.13
USP34-206ENST00000460004 PRKAR2AP13861 404 aaKnown RBP14.26□□□□□ -0.13
USP34-206ENST00000460004 PRR29P0C7W0 189 aa14.22□□□□□ -0.13
USP34-206ENST00000460004 HAX1O00165 279 aa14.2□□□□□ -0.14
USP34-206ENST00000460004 CHADLQ6NUI6 762 aa14.19□□□□□ -0.14
USP34-206ENST00000460004 DCAF1Q9Y4B6 1507 aa14.13□□□□□ -0.15
USP34-206ENST00000460004 SP7Q8TDD2 431 aaPredicted RBP14.1□□□□□ -0.15
USP34-206ENST00000460004 EVX2Q03828 476 aa14.07□□□□□ -0.16
USP34-206ENST00000460004 MYO15BQ96JP2 1530 aa14.01□□□□□ -0.17
USP34-206ENST00000460004 STAG3Q9UJ98 1225 aa14.01□□□□□ -0.17
USP34-206ENST00000460004 ABCC9O60706 1549 aa14□□□□□ -0.17
USP34-206ENST00000460004 C19orf67A6NJJ6 358 aa13.96□□□□□ -0.17
USP34-206ENST00000460004 DCAF8L2P0C7V8 631 aa13.93□□□□□ -0.18
USP34-206ENST00000460004 FARP1Q9Y4F1 1045 aaPredicted RBP13.93□□□□□ -0.18
USP34-206ENST00000460004 CREBZFQ9NS37 354 aa13.92□□□□□ -0.18
USP34-206ENST00000460004 PROM2Q8N271 834 aa13.91□□□□□ -0.18
USP34-206ENST00000460004 NACADO15069 1562 aa13.91□□□□□ -0.18
USP34-206ENST00000460004 CD44P16070 742 aaKnown RBP13.81□□□□□ -0.2
USP34-206ENST00000460004 FKBP8Q14318 412 aa13.81□□□□□ -0.2
USP34-206ENST00000460004 RB1CC1Q8TDY2 1594 aa13.79□□□□□ -0.2
USP34-206ENST00000460004 GABBR2O75899 941 aa13.72□□□□□ -0.21
USP34-206ENST00000460004 MNX1P50219 401 aaPredicted RBP13.7□□□□□ -0.22
USP34-206ENST00000460004 ZRANB1Q9UGI0 708 aa13.66□□□□□ -0.22
USP34-206ENST00000460004 SHROOM4Q9ULL8 1493 aa13.65□□□□□ -0.22
USP34-206ENST00000460004 NPM1P06748 294 aaKnown RBP eCLIP13.63□□□□□ -0.23
USP34-206ENST00000460004 MIER1Q8N108 512 aa13.6□□□□□ -0.23
USP34-206ENST00000460004 SCRIBQ14160 1630 aa13.59□□□□□ -0.23
USP34-206ENST00000460004 ZNF579Q8NAF0 562 aaKnown RBP13.58□□□□□ -0.24
USP34-206ENST00000460004 PAK3O75914 559 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms