RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 NISCHQ9Y2I1 1504 aa17.61■□□□□ 0.41
SNRPD3-205ENST00000468770 CCDC180Q9P1Z9 1646 aa15.68■□□□□ 0.1
SNRPD3-205ENST00000468770 ABCC9O60706 1549 aa15.62■□□□□ 0.09
SNRPD3-205ENST00000468770 DCAF8L2P0C7V8 631 aa14.93□□□□□ -0.02
SNRPD3-205ENST00000468770 RB1CC1Q8TDY2 1594 aa14.9□□□□□ -0.02
SNRPD3-205ENST00000468770 NACADO15069 1562 aa14.84□□□□□ -0.03
SNRPD3-205ENST00000468770 MYO15BQ96JP2 1530 aa14.66□□□□□ -0.06
SNRPD3-205ENST00000468770 PABPN1Q86U42 306 aaKnown RBP eCLIP14.61□□□□□ -0.07
SNRPD3-205ENST00000468770 ZCCHC6Q5VYS8 1495 aaKnown RBP14.6□□□□□ -0.07
SNRPD3-205ENST00000468770 DNAJC5BQ9UF47 199 aa14.54□□□□□ -0.08
SNRPD3-205ENST00000468770 DCAF1Q9Y4B6 1507 aa14.53□□□□□ -0.08
SNRPD3-205ENST00000468770 UNC13AQ9UPW8 1703 aa14.5□□□□□ -0.09
SNRPD3-205ENST00000468770 BICRAQ9NZM4 1560 aa14.43□□□□□ -0.1
SNRPD3-205ENST00000468770 SCRIBQ14160 1630 aa14.33□□□□□ -0.11
SNRPD3-205ENST00000468770 SHROOM4Q9ULL8 1493 aa14.26□□□□□ -0.13
SNRPD3-205ENST00000468770 EIF4G1Q04637 1599 aaKnown RBP14.09□□□□□ -0.15
SNRPD3-205ENST00000468770 CC2D2AQ9P2K1 1620 aa14.08□□□□□ -0.15
SNRPD3-205ENST00000468770 CECR2Q9BXF3 1484 aa14.06□□□□□ -0.16
SNRPD3-205ENST00000468770 NCAPD3P42695 1498 aa13.71□□□□□ -0.21
SNRPD3-205ENST00000468770 SMARCA4P51532 1647 aa13.68□□□□□ -0.22
SNRPD3-205ENST00000468770 ATAD2BQ9ULI0 1458 aa13.68□□□□□ -0.22
SNRPD3-205ENST00000468770 BAZ1AQ9NRL2 1556 aaPredicted RBP13.66□□□□□ -0.22
SNRPD3-205ENST00000468770 SMARCA2P51531 1590 aa13.65□□□□□ -0.22
SNRPD3-205ENST00000468770 HMGXB3Q12766 1538 aa13.59□□□□□ -0.23
SNRPD3-205ENST00000468770 BAZ1BQ9UIG0 1483 aaKnown RBP13.57□□□□□ -0.24
SNRPD3-205ENST00000468770 MROH2BQ7Z745 1585 aa13.57□□□□□ -0.24
SNRPD3-205ENST00000468770 PEG3Q9GZU2 1588 aa13.54□□□□□ -0.24
SNRPD3-205ENST00000468770 ERCC6Q03468 1493 aa13.49□□□□□ -0.25
SNRPD3-205ENST00000468770 NESP48681 1621 aa13.44□□□□□ -0.26
SNRPD3-205ENST00000468770 WIZO95785 1651 aa13.4□□□□□ -0.26
SNRPD3-205ENST00000468770 CUX2O14529 1486 aa13.38□□□□□ -0.27
SNRPD3-205ENST00000468770 RSF1Q96T23 1441 aaPredicted RBP13.36□□□□□ -0.27
SNRPD3-205ENST00000468770 LAMC3Q9Y6N6 1575 aa13.36□□□□□ -0.27
SNRPD3-205ENST00000468770 CADPSQ9ULU8 1353 aa13.32□□□□□ -0.28
SNRPD3-205ENST00000468770 PDS5BQ9NTI5 1447 aa13.32□□□□□ -0.28
SNRPD3-205ENST00000468770 DNAJC5Q9H3Z4 198 aa13.26□□□□□ -0.29
SNRPD3-205ENST00000468770 TOP2AP11388 1531 aaKnown RBP13.24□□□□□ -0.29
SNRPD3-205ENST00000468770 KIF21AQ7Z4S6 1674 aa13.23□□□□□ -0.29
SNRPD3-205ENST00000468770 THOC2Q8NI27 1593 aaKnown RBP13.22□□□□□ -0.29
SNRPD3-205ENST00000468770 CFTRP13569 1480 aa13.18□□□□□ -0.3
SNRPD3-205ENST00000468770 MRC2Q9UBG0 1479 aa13.16□□□□□ -0.3
SNRPD3-205ENST00000468770 FANCD2Q9BXW9 1451 aa13.16□□□□□ -0.3
SNRPD3-205ENST00000468770 CEP164Q9UPV0 1460 aa13.15□□□□□ -0.3
SNRPD3-205ENST00000468770 CCDC88BA6NC98 1476 aa13.12□□□□□ -0.31
SNRPD3-205ENST00000468770 WDR62O43379 1518 aa13.1□□□□□ -0.31
SNRPD3-205ENST00000468770 URB2Q14146 1524 aaKnown RBP13.02□□□□□ -0.33
SNRPD3-205ENST00000468770 PRDM2Q13029 1718 aa12.99□□□□□ -0.33
SNRPD3-205ENST00000468770 SUPT5HO00267 1087 aaKnown RBP12.97□□□□□ -0.33
SNRPD3-205ENST00000468770 ABCC8Q09428 1581 aa12.92□□□□□ -0.34
SNRPD3-205ENST00000468770 TOPBP1Q92547 1522 aa12.91□□□□□ -0.34
SNRPD3-205ENST00000468770 IFT140Q96RY7 1462 aa12.89□□□□□ -0.35
SNRPD3-205ENST00000468770 OSCARQ8IYS5 282 aa12.88□□□□□ -0.35
SNRPD3-205ENST00000468770 DNMBPQ6XZF7 1577 aa12.86□□□□□ -0.35
SNRPD3-205ENST00000468770 ZNF608Q9ULD9 1512 aaPredicted RBP12.84□□□□□ -0.35
SNRPD3-205ENST00000468770 POLA1P09884 1462 aaPredicted RBP12.79□□□□□ -0.36
SNRPD3-205ENST00000468770 SOGA1O94964 1423 aa12.78□□□□□ -0.36
SNRPD3-205ENST00000468770 AQRO60306 1485 aaKnown RBP eCLIP12.78□□□□□ -0.363e-6■■□□□ 13.8
SNRPD3-205ENST00000468770 TRIM41Q8WV44 630 aa12.77□□□□□ -0.37
SNRPD3-205ENST00000468770 RAD54L2Q9Y4B4 1467 aa12.76□□□□□ -0.37
SNRPD3-205ENST00000468770 TARBP1Q13395 1621 aaKnown RBP12.75□□□□□ -0.37
SNRPD3-205ENST00000468770 EIF4G3O43432 1585 aaKnown RBP12.74□□□□□ -0.37
SNRPD3-205ENST00000468770 CUX1P39880 1505 aa12.73□□□□□ -0.37
SNRPD3-205ENST00000468770 FGD5Q6ZNL6 1462 aa12.73□□□□□ -0.37
SNRPD3-205ENST00000468770 TDRD9Q8NDG6 1382 aaKnown RBP12.73□□□□□ -0.37
SNRPD3-205ENST00000468770 FBLN2P98095 1184 aa12.73□□□□□ -0.37
SNRPD3-205ENST00000468770 CHMP7Q8WUX9 453 aaPredicted RBP12.65□□□□□ -0.38
SNRPD3-205ENST00000468770 WDR97A6NE52 1622 aa12.63□□□□□ -0.39
SNRPD3-205ENST00000468770 GRIN2BQ13224 1484 aa12.62□□□□□ -0.39
SNRPD3-205ENST00000468770 SNAPC4Q5SXM2 1469 aa12.62□□□□□ -0.39
SNRPD3-205ENST00000468770 CHD1O14646 1710 aa12.62□□□□□ -0.39
SNRPD3-205ENST00000468770 WRNQ14191 1432 aaPredicted RBP eCLIP12.61□□□□□ -0.39
SNRPD3-205ENST00000468770 GAPVD1Q14C86 1478 aa12.6□□□□□ -0.39
SNRPD3-205ENST00000468770 MAGI1Q96QZ7 1491 aaPredicted RBP12.59□□□□□ -0.39
SNRPD3-205ENST00000468770 RIMBP3CA6NJZ7 1639 aa12.59□□□□□ -0.39
SNRPD3-205ENST00000468770 RIMBP3BA6NNM3 1639 aa12.59□□□□□ -0.39
SNRPD3-205ENST00000468770 RIMBP3Q9UFD9 1639 aa12.59□□□□□ -0.39
SNRPD3-205ENST00000468770 ABCA10Q8WWZ4 1543 aa12.59□□□□□ -0.39
SNRPD3-205ENST00000468770 ARHGEF11O15085 1522 aa12.58□□□□□ -0.4
SNRPD3-205ENST00000468770 CYB5RLQ6IPT4 315 aa12.57□□□□□ -0.4
SNRPD3-205ENST00000468770 TOP2BQ02880 1626 aa12.56□□□□□ -0.4
SNRPD3-205ENST00000468770 SYNJ2O15056 1496 aa12.56□□□□□ -0.4
SNRPD3-205ENST00000468770 SYNJ1O43426 1573 aa12.55□□□□□ -0.4
SNRPD3-205ENST00000468770 BIVM-ERCC5R4GMW8 1640 aa12.54□□□□□ -0.4
SNRPD3-205ENST00000468770 ABCA5Q8WWZ7 1642 aa12.52□□□□□ -0.4
SNRPD3-205ENST00000468770 PBRM1Q86U86 1689 aa12.52□□□□□ -0.4
SNRPD3-205ENST00000468770 CLASP1Q7Z460 1538 aa12.47□□□□□ -0.41
SNRPD3-205ENST00000468770 ARAP1Q96P48 1450 aa12.46□□□□□ -0.41
SNRPD3-205ENST00000468770 GRIN2AQ12879 1464 aa12.45□□□□□ -0.42
SNRPD3-205ENST00000468770 FHAD1B1AJZ9 1412 aa12.45□□□□□ -0.42
SNRPD3-205ENST00000468770 ERICH3Q5RHP9 1530 aa12.43□□□□□ -0.42
SNRPD3-205ENST00000468770 ADAMTS12P58397 1594 aa12.42□□□□□ -0.42
SNRPD3-205ENST00000468770 TRHP20396 242 aaPredicted RBP12.4□□□□□ -0.42
SNRPD3-205ENST00000468770 NUP160Q12769 1436 aa12.39□□□□□ -0.43
SNRPD3-205ENST00000468770 KIF27Q86VH2 1401 aa12.37□□□□□ -0.43
SNRPD3-205ENST00000468770 CEP170Q5SW79 1584 aa12.37□□□□□ -0.43
SNRPD3-205ENST00000468770 IGF1RP08069 1367 aa12.35□□□□□ -0.43
SNRPD3-205ENST00000468770 JPH4Q96JJ6 628 aa12.34□□□□□ -0.43
SNRPD3-205ENST00000468770 ERCC6L2Q5T890 1561 aa12.3□□□□□ -0.44
SNRPD3-205ENST00000468770 PRG4Q92954 1404 aaPredicted RBP12.3□□□□□ -0.44
SNRPD3-205ENST00000468770 SHROOM2Q13796 1616 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms