RNA–Protein interactions for RNA: ENST00000465705.3

TMCO1-204, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 5

Gene TMCO1, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-204ENST00000465705 AEBP2Q6ZN18 517 aaPredicted RBP29.47■■■□□ 2.31
TMCO1-204ENST00000465705 CHIC1Q5VXU3 224 aa28.31■■■□□ 2.12
TMCO1-204ENST00000465705 NISCHQ9Y2I1 1504 aa27.06■■□□□ 1.92
TMCO1-204ENST00000465705 SENP3Q9H4L4 574 aaPredicted RBP24.99■■□□□ 1.59
TMCO1-204ENST00000465705 PHF23Q9BUL5 403 aaPredicted RBP24.9■■□□□ 1.58
TMCO1-204ENST00000465705 CCDC180Q9P1Z9 1646 aa24.02■■□□□ 1.44
TMCO1-204ENST00000465705 FOXD1Q16676 465 aa23.31■■□□□ 1.32
TMCO1-204ENST00000465705 ABCC9O60706 1549 aa23.31■■□□□ 1.32
TMCO1-204ENST00000465705 PLPPR3Q6T4P5 718 aa22.79■■□□□ 1.24
TMCO1-204ENST00000465705 ZCCHC6Q5VYS8 1495 aaKnown RBP22.6■■□□□ 1.21
TMCO1-204ENST00000465705 DCAF8L2P0C7V8 631 aa22.54■■□□□ 1.2
TMCO1-204ENST00000465705 NACADO15069 1562 aa22.52■■□□□ 1.2
TMCO1-204ENST00000465705 RB1CC1Q8TDY2 1594 aa22.51■■□□□ 1.19
TMCO1-204ENST00000465705 MYO15BQ96JP2 1530 aa22.43■■□□□ 1.18
TMCO1-204ENST00000465705 DCAF1Q9Y4B6 1507 aa22.41■■□□□ 1.18
TMCO1-204ENST00000465705 PPP6R1Q9UPN7 881 aa22.13■■□□□ 1.13
TMCO1-204ENST00000465705 ADRA2BP18089 450 aa22.09■■□□□ 1.13
TMCO1-204ENST00000465705 UNC13AQ9UPW8 1703 aa21.98■■□□□ 1.11
TMCO1-204ENST00000465705 SCRIBQ14160 1630 aa21.94■■□□□ 1.1
TMCO1-204ENST00000465705 PIAS4Q8N2W9 510 aaPredicted RBP21.89■■□□□ 1.09
TMCO1-204ENST00000465705 BICRAQ9NZM4 1560 aa21.78■■□□□ 1.08
TMCO1-204ENST00000465705 PABPN1Q86U42 306 aaKnown RBP eCLIP21.78■■□□□ 1.08
TMCO1-204ENST00000465705 SHROOM4Q9ULL8 1493 aa21.62■■□□□ 1.05
TMCO1-204ENST00000465705 MSH5O43196 834 aa21.59■■□□□ 1.05
TMCO1-204ENST00000465705 EIF4G1Q04637 1599 aaKnown RBP21.23■□□□□ 0.99
TMCO1-204ENST00000465705 DNAJC5BQ9UF47 199 aa21.15■□□□□ 0.98
TMCO1-204ENST00000465705 CC2D2AQ9P2K1 1620 aa21.09■□□□□ 0.97
TMCO1-204ENST00000465705 CECR2Q9BXF3 1484 aa21.05■□□□□ 0.96
TMCO1-204ENST00000465705 BAZ1AQ9NRL2 1556 aaPredicted RBP20.99■□□□□ 0.95
TMCO1-204ENST00000465705 SMARCA4P51532 1647 aa20.98■□□□□ 0.95
TMCO1-204ENST00000465705 MROH2BQ7Z745 1585 aa20.86■□□□□ 0.93
TMCO1-204ENST00000465705 SMARCA2P51531 1590 aa20.81■□□□□ 0.92
TMCO1-204ENST00000465705 ATAD2BQ9ULI0 1458 aa20.81■□□□□ 0.92
TMCO1-204ENST00000465705 PEG3Q9GZU2 1588 aa20.76■□□□□ 0.91
TMCO1-204ENST00000465705 NCAPD3P42695 1498 aa20.75■□□□□ 0.91
TMCO1-204ENST00000465705 HMGXB3Q12766 1538 aa20.7■□□□□ 0.9
TMCO1-204ENST00000465705 RSF1Q96T23 1441 aaPredicted RBP20.68■□□□□ 0.9
TMCO1-204ENST00000465705 BAZ1BQ9UIG0 1483 aaKnown RBP20.68■□□□□ 0.9
TMCO1-204ENST00000465705 WIZO95785 1651 aa20.66■□□□□ 0.9
TMCO1-204ENST00000465705 POTEDQ86YR6 584 aa20.47■□□□□ 0.87
TMCO1-204ENST00000465705 TOP2AP11388 1531 aaKnown RBP20.47■□□□□ 0.87
TMCO1-204ENST00000465705 SUPT5HO00267 1087 aaKnown RBP20.3■□□□□ 0.84
TMCO1-204ENST00000465705 LAMC3Q9Y6N6 1575 aa20.21■□□□□ 0.83
TMCO1-204ENST00000465705 NESP48681 1621 aa20.21■□□□□ 0.83
TMCO1-204ENST00000465705 CCDC88BA6NC98 1476 aa20.19■□□□□ 0.82
TMCO1-204ENST00000465705 MAPK8IP2Q13387 824 aaPredicted RBP20.18■□□□□ 0.82
TMCO1-204ENST00000465705 CADPSQ9ULU8 1353 aa20.17■□□□□ 0.82
TMCO1-204ENST00000465705 ERCC6Q03468 1493 aa20.11■□□□□ 0.81
TMCO1-204ENST00000465705 SCAF1Q9H7N4 1312 aaKnown RBP20.09■□□□□ 0.81
TMCO1-204ENST00000465705 CFTRP13569 1480 aa20.09■□□□□ 0.81
TMCO1-204ENST00000465705 PPP4R3CPQ6ZMV5 832 aa20.06■□□□□ 0.8
TMCO1-204ENST00000465705 PDS5BQ9NTI5 1447 aa20.06■□□□□ 0.8
TMCO1-204ENST00000465705 KIF21AQ7Z4S6 1674 aa20■□□□□ 0.79
TMCO1-204ENST00000465705 PRDM2Q13029 1718 aa19.99■□□□□ 0.79
TMCO1-204ENST00000465705 FANCD2Q9BXW9 1451 aa19.96■□□□□ 0.79
TMCO1-204ENST00000465705 CEP164Q9UPV0 1460 aa19.92■□□□□ 0.78
TMCO1-204ENST00000465705 THOC2Q8NI27 1593 aaKnown RBP19.89■□□□□ 0.77
TMCO1-204ENST00000465705 DMRT2Q9Y5R5 561 aa19.89■□□□□ 0.77
TMCO1-204ENST00000465705 MRC2Q9UBG0 1479 aa19.86■□□□□ 0.77
TMCO1-204ENST00000465705 CUX2O14529 1486 aa19.8■□□□□ 0.76
TMCO1-204ENST00000465705 WDR62O43379 1518 aa19.78■□□□□ 0.76
TMCO1-204ENST00000465705 URB2Q14146 1524 aaKnown RBP19.73■□□□□ 0.75
TMCO1-204ENST00000465705 ABCC8Q09428 1581 aa19.66■□□□□ 0.74
TMCO1-204ENST00000465705 TOPBP1Q92547 1522 aa19.66■□□□□ 0.74
TMCO1-204ENST00000465705 DNMBPQ6XZF7 1577 aa19.66■□□□□ 0.74
TMCO1-204ENST00000465705 CUX1P39880 1505 aa19.56■□□□□ 0.72
TMCO1-204ENST00000465705 CNKSR2Q8WXI2 1034 aa19.55■□□□□ 0.72
TMCO1-204ENST00000465705 WRNQ14191 1432 aaPredicted RBP eCLIP19.52■□□□□ 0.72
TMCO1-204ENST00000465705 POLA1P09884 1462 aaPredicted RBP19.49■□□□□ 0.71
TMCO1-204ENST00000465705 IFT140Q96RY7 1462 aa19.49■□□□□ 0.71
TMCO1-204ENST00000465705 FGD5Q6ZNL6 1462 aa19.48■□□□□ 0.71
TMCO1-204ENST00000465705 SYNJ1O43426 1573 aa19.46■□□□□ 0.71
TMCO1-204ENST00000465705 TOP2BQ02880 1626 aa19.46■□□□□ 0.71
TMCO1-204ENST00000465705 BIVM-ERCC5R4GMW8 1640 aa19.46■□□□□ 0.71
TMCO1-204ENST00000465705 TARBP1Q13395 1621 aaKnown RBP19.41■□□□□ 0.7
TMCO1-204ENST00000465705 SOGA1O94964 1423 aa19.41■□□□□ 0.7
TMCO1-204ENST00000465705 DNAJC5Q9H3Z4 198 aa19.4■□□□□ 0.7
TMCO1-204ENST00000465705 RAD54L2Q9Y4B4 1467 aa19.4■□□□□ 0.7
TMCO1-204ENST00000465705 ZNF608Q9ULD9 1512 aaPredicted RBP19.37■□□□□ 0.69
TMCO1-204ENST00000465705 NCBP3Q53F19 620 aaKnown RBP19.35■□□□□ 0.69
TMCO1-204ENST00000465705 EIF4G3O43432 1585 aaKnown RBP19.34■□□□□ 0.69
TMCO1-204ENST00000465705 WDR97A6NE52 1622 aa19.32■□□□□ 0.68
TMCO1-204ENST00000465705 HOXD11P31277 338 aaPredicted RBP19.3■□□□□ 0.68
TMCO1-204ENST00000465705 ABCA10Q8WWZ4 1543 aa19.3■□□□□ 0.68
TMCO1-204ENST00000465705 TDRD9Q8NDG6 1382 aaKnown RBP19.28■□□□□ 0.68
TMCO1-204ENST00000465705 AQRO60306 1485 aaKnown RBP eCLIP19.28■□□□□ 0.681e-7■■■■■ 30.4
TMCO1-204ENST00000465705 RNF216Q9NWF9 866 aaPredicted RBP19.27■□□□□ 0.68
TMCO1-204ENST00000465705 ABCA5Q8WWZ7 1642 aa19.22■□□□□ 0.67
TMCO1-204ENST00000465705 GAPVD1Q14C86 1478 aa19.2■□□□□ 0.66
TMCO1-204ENST00000465705 GRIN2BQ13224 1484 aa19.18■□□□□ 0.66
TMCO1-204ENST00000465705 PBRM1Q86U86 1689 aa19.17■□□□□ 0.66
TMCO1-204ENST00000465705 TRIM41Q8WV44 630 aa19.17■□□□□ 0.66
TMCO1-204ENST00000465705 KCNA4P22459 653 aa19.16■□□□□ 0.66
TMCO1-204ENST00000465705 DCAF8L1A6NGE4 600 aa19.15■□□□□ 0.66
TMCO1-204ENST00000465705 NPM3O75607 178 aaKnown RBP19.14■□□□□ 0.65
TMCO1-204ENST00000465705 SNAPC4Q5SXM2 1469 aa19.14■□□□□ 0.65
TMCO1-204ENST00000465705 MAGI1Q96QZ7 1491 aaPredicted RBP19.12■□□□□ 0.65
TMCO1-204ENST00000465705 KIF27Q86VH2 1401 aa19.1■□□□□ 0.65
TMCO1-204ENST00000465705 ERICH3Q5RHP9 1530 aa19.08■□□□□ 0.64
TMCO1-204ENST00000465705 CHD1O14646 1710 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms