RNA–Protein interactions for RNA: ENST00000628579.1

TMCO1-209, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 5 BASIC

Gene TMCO1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-209ENST00000628579 NISCHQ9Y2I1 1504 aa25.93■■□□□ 1.74
TMCO1-209ENST00000628579 CCDC180Q9P1Z9 1646 aa23.13■■□□□ 1.29
TMCO1-209ENST00000628579 ABCC9O60706 1549 aa22.9■■□□□ 1.26
TMCO1-209ENST00000628579 RB1CC1Q8TDY2 1594 aa21.88■■□□□ 1.09
TMCO1-209ENST00000628579 NACADO15069 1562 aa21.79■■□□□ 1.08
TMCO1-209ENST00000628579 DCAF8L2P0C7V8 631 aa21.77■■□□□ 1.08
TMCO1-209ENST00000628579 MYO15BQ96JP2 1530 aa21.57■■□□□ 1.04
TMCO1-209ENST00000628579 ZCCHC6Q5VYS8 1495 aaKnown RBP21.56■■□□□ 1.04
TMCO1-209ENST00000628579 UNC13AQ9UPW8 1703 aa21.43■■□□□ 1.02
TMCO1-209ENST00000628579 DCAF1Q9Y4B6 1507 aa21.41■■□□□ 1.02
TMCO1-209ENST00000628579 PABPN1Q86U42 306 aaKnown RBP eCLIP21.37■■□□□ 1.01
TMCO1-209ENST00000628579 BICRAQ9NZM4 1560 aa21.27■■□□□ 1
TMCO1-209ENST00000628579 DNAJC5BQ9UF47 199 aa21.25■□□□□ 0.99
TMCO1-209ENST00000628579 SCRIBQ14160 1630 aa21.15■□□□□ 0.98
TMCO1-209ENST00000628579 SHROOM4Q9ULL8 1493 aa20.94■□□□□ 0.94
TMCO1-209ENST00000628579 EIF4G1Q04637 1599 aaKnown RBP20.72■□□□□ 0.91
TMCO1-209ENST00000628579 CC2D2AQ9P2K1 1620 aa20.69■□□□□ 0.9
TMCO1-209ENST00000628579 CECR2Q9BXF3 1484 aa20.58■□□□□ 0.89
TMCO1-209ENST00000628579 SMARCA4P51532 1647 aa20.18■□□□□ 0.82
TMCO1-209ENST00000628579 NCAPD3P42695 1498 aa20.12■□□□□ 0.81
TMCO1-209ENST00000628579 ATAD2BQ9ULI0 1458 aa20.11■□□□□ 0.81
TMCO1-209ENST00000628579 BAZ1AQ9NRL2 1556 aaPredicted RBP20.1■□□□□ 0.81
TMCO1-209ENST00000628579 SMARCA2P51531 1590 aa20.06■□□□□ 0.8
TMCO1-209ENST00000628579 MROH2BQ7Z745 1585 aa20.01■□□□□ 0.79
TMCO1-209ENST00000628579 HMGXB3Q12766 1538 aa20.01■□□□□ 0.79
TMCO1-209ENST00000628579 PEG3Q9GZU2 1588 aa19.96■□□□□ 0.79
TMCO1-209ENST00000628579 BAZ1BQ9UIG0 1483 aaKnown RBP19.93■□□□□ 0.78
TMCO1-209ENST00000628579 WIZO95785 1651 aa19.79■□□□□ 0.76
TMCO1-209ENST00000628579 NESP48681 1621 aa19.77■□□□□ 0.76
TMCO1-209ENST00000628579 ERCC6Q03468 1493 aa19.73■□□□□ 0.75
TMCO1-209ENST00000628579 RSF1Q96T23 1441 aaPredicted RBP19.68■□□□□ 0.74
TMCO1-209ENST00000628579 LAMC3Q9Y6N6 1575 aa19.62■□□□□ 0.73
TMCO1-209ENST00000628579 CUX2O14529 1486 aa19.57■□□□□ 0.72
TMCO1-209ENST00000628579 TOP2AP11388 1531 aaKnown RBP19.53■□□□□ 0.72
TMCO1-209ENST00000628579 CADPSQ9ULU8 1353 aa19.53■□□□□ 0.72
TMCO1-209ENST00000628579 KIF21AQ7Z4S6 1674 aa19.51■□□□□ 0.71
TMCO1-209ENST00000628579 THOC2Q8NI27 1593 aaKnown RBP19.49■□□□□ 0.71
TMCO1-209ENST00000628579 PDS5BQ9NTI5 1447 aa19.49■□□□□ 0.71
TMCO1-209ENST00000628579 CFTRP13569 1480 aa19.37■□□□□ 0.69
TMCO1-209ENST00000628579 MRC2Q9UBG0 1479 aa19.33■□□□□ 0.68
TMCO1-209ENST00000628579 CCDC88BA6NC98 1476 aa19.32■□□□□ 0.68
TMCO1-209ENST00000628579 FANCD2Q9BXW9 1451 aa19.32■□□□□ 0.68
TMCO1-209ENST00000628579 CEP164Q9UPV0 1460 aa19.3■□□□□ 0.68
TMCO1-209ENST00000628579 WDR62O43379 1518 aa19.28■□□□□ 0.68
TMCO1-209ENST00000628579 DNAJC5Q9H3Z4 198 aa19.25■□□□□ 0.67
TMCO1-209ENST00000628579 PRDM2Q13029 1718 aa19.2■□□□□ 0.66
TMCO1-209ENST00000628579 URB2Q14146 1524 aaKnown RBP19.16■□□□□ 0.66
TMCO1-209ENST00000628579 SUPT5HO00267 1087 aaKnown RBP19.04■□□□□ 0.64
TMCO1-209ENST00000628579 TOPBP1Q92547 1522 aa18.99■□□□□ 0.63
TMCO1-209ENST00000628579 DNMBPQ6XZF7 1577 aa18.93■□□□□ 0.62
TMCO1-209ENST00000628579 ABCC8Q09428 1581 aa18.91■□□□□ 0.62
TMCO1-209ENST00000628579 IFT140Q96RY7 1462 aa18.9■□□□□ 0.62
TMCO1-209ENST00000628579 ZNF608Q9ULD9 1512 aaPredicted RBP18.89■□□□□ 0.61
TMCO1-209ENST00000628579 POLA1P09884 1462 aaPredicted RBP18.82■□□□□ 0.6
TMCO1-209ENST00000628579 TARBP1Q13395 1621 aaKnown RBP18.81■□□□□ 0.6
TMCO1-209ENST00000628579 EIF4G3O43432 1585 aaKnown RBP18.79■□□□□ 0.6
TMCO1-209ENST00000628579 CUX1P39880 1505 aa18.79■□□□□ 0.6
TMCO1-209ENST00000628579 RAD54L2Q9Y4B4 1467 aa18.76■□□□□ 0.59
TMCO1-209ENST00000628579 AQRO60306 1485 aaKnown RBP eCLIP18.74■□□□□ 0.591e-7■■■■■ 26.9
TMCO1-209ENST00000628579 FGD5Q6ZNL6 1462 aa18.74■□□□□ 0.59
TMCO1-209ENST00000628579 OSCARQ8IYS5 282 aa18.72■□□□□ 0.59
TMCO1-209ENST00000628579 SOGA1O94964 1423 aa18.72■□□□□ 0.59
TMCO1-209ENST00000628579 TDRD9Q8NDG6 1382 aaKnown RBP18.68■□□□□ 0.58
TMCO1-209ENST00000628579 WDR97A6NE52 1622 aa18.6■□□□□ 0.57
TMCO1-209ENST00000628579 CHD1O14646 1710 aa18.6■□□□□ 0.57
TMCO1-209ENST00000628579 SNAPC4Q5SXM2 1469 aa18.56■□□□□ 0.56
TMCO1-209ENST00000628579 WRNQ14191 1432 aaPredicted RBP eCLIP18.56■□□□□ 0.56
TMCO1-209ENST00000628579 SYNJ1O43426 1573 aa18.55■□□□□ 0.56
TMCO1-209ENST00000628579 TRIM41Q8WV44 630 aa18.55■□□□□ 0.56
TMCO1-209ENST00000628579 TOP2BQ02880 1626 aa18.54■□□□□ 0.56
TMCO1-209ENST00000628579 BIVM-ERCC5R4GMW8 1640 aa18.54■□□□□ 0.56
TMCO1-209ENST00000628579 FBLN2P98095 1184 aa18.54■□□□□ 0.56
TMCO1-209ENST00000628579 ABCA10Q8WWZ4 1543 aa18.53■□□□□ 0.56
TMCO1-209ENST00000628579 GRIN2BQ13224 1484 aa18.52■□□□□ 0.56
TMCO1-209ENST00000628579 GAPVD1Q14C86 1478 aa18.51■□□□□ 0.55
TMCO1-209ENST00000628579 RIMBP3CA6NJZ7 1639 aa18.49■□□□□ 0.55
TMCO1-209ENST00000628579 RIMBP3BA6NNM3 1639 aa18.49■□□□□ 0.55
TMCO1-209ENST00000628579 ABCA5Q8WWZ7 1642 aa18.49■□□□□ 0.55
TMCO1-209ENST00000628579 RIMBP3Q9UFD9 1639 aa18.49■□□□□ 0.55
TMCO1-209ENST00000628579 MAGI1Q96QZ7 1491 aaPredicted RBP18.49■□□□□ 0.55
TMCO1-209ENST00000628579 PBRM1Q86U86 1689 aa18.49■□□□□ 0.55
TMCO1-209ENST00000628579 ARHGEF11O15085 1522 aa18.46■□□□□ 0.55
TMCO1-209ENST00000628579 CHMP7Q8WUX9 453 aaPredicted RBP18.44■□□□□ 0.54
TMCO1-209ENST00000628579 SYNJ2O15056 1496 aa18.43■□□□□ 0.54
TMCO1-209ENST00000628579 CLASP1Q7Z460 1538 aa18.38■□□□□ 0.53
TMCO1-209ENST00000628579 ADAMTS12P58397 1594 aa18.34■□□□□ 0.53
TMCO1-209ENST00000628579 ARAP1Q96P48 1450 aa18.31■□□□□ 0.52
TMCO1-209ENST00000628579 CYB5RLQ6IPT4 315 aa18.3■□□□□ 0.52
TMCO1-209ENST00000628579 GRIN2AQ12879 1464 aa18.3■□□□□ 0.52
TMCO1-209ENST00000628579 ERICH3Q5RHP9 1530 aa18.29■□□□□ 0.52
TMCO1-209ENST00000628579 FHAD1B1AJZ9 1412 aa18.27■□□□□ 0.52
TMCO1-209ENST00000628579 CEP170Q5SW79 1584 aa18.24■□□□□ 0.51
TMCO1-209ENST00000628579 NUP160Q12769 1436 aa18.23■□□□□ 0.51
TMCO1-209ENST00000628579 KIF27Q86VH2 1401 aa18.16■□□□□ 0.5
TMCO1-209ENST00000628579 ERCC6L2Q5T890 1561 aa18.15■□□□□ 0.5
TMCO1-209ENST00000628579 IGF1RP08069 1367 aa18.15■□□□□ 0.5
TMCO1-209ENST00000628579 SHROOM2Q13796 1616 aa18.12■□□□□ 0.49
TMCO1-209ENST00000628579 CUL7Q14999 1698 aa18.09■□□□□ 0.49
TMCO1-209ENST00000628579 RUSC2Q8N2Y8 1516 aa18.08■□□□□ 0.48
TMCO1-209ENST00000628579 PRG4Q92954 1404 aaPredicted RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms