RNA–Protein interactions for RNA: ENST00000367881.9

TMCO1-201, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-201ENST00000367881 NISCHQ9Y2I1 1504 aa24■■□□□ 1.43
TMCO1-201ENST00000367881 CCDC180Q9P1Z9 1646 aa21.12■□□□□ 0.97
TMCO1-201ENST00000367881 AEBP2Q6ZN18 517 aaPredicted RBP20.47■□□□□ 0.87
TMCO1-201ENST00000367881 ZCCHC6Q5VYS8 1495 aaKnown RBP20.13■□□□□ 0.81
TMCO1-201ENST00000367881 ABCC9O60706 1549 aa20.08■□□□□ 0.8
TMCO1-201ENST00000367881 DCAF1Q9Y4B6 1507 aa19.86■□□□□ 0.77
TMCO1-201ENST00000367881 DCAF8L2P0C7V8 631 aa19.82■□□□□ 0.76
TMCO1-201ENST00000367881 CHIC1Q5VXU3 224 aa19.71■□□□□ 0.75
TMCO1-201ENST00000367881 MYO15BQ96JP2 1530 aa19.7■□□□□ 0.74
TMCO1-201ENST00000367881 NACADO15069 1562 aa19.67■□□□□ 0.74
TMCO1-201ENST00000367881 RB1CC1Q8TDY2 1594 aa19.56■□□□□ 0.72
TMCO1-201ENST00000367881 SHROOM4Q9ULL8 1493 aa19.38■□□□□ 0.69
TMCO1-201ENST00000367881 SCRIBQ14160 1630 aa19.35■□□□□ 0.69
TMCO1-201ENST00000367881 UNC13AQ9UPW8 1703 aa19.28■□□□□ 0.68
TMCO1-201ENST00000367881 BICRAQ9NZM4 1560 aa18.98■□□□□ 0.63
TMCO1-201ENST00000367881 PABPN1Q86U42 306 aaKnown RBP eCLIP18.84■□□□□ 0.61
TMCO1-201ENST00000367881 CECR2Q9BXF3 1484 aa18.65■□□□□ 0.58
TMCO1-201ENST00000367881 BAZ1AQ9NRL2 1556 aaPredicted RBP18.56■□□□□ 0.56
TMCO1-201ENST00000367881 SMARCA4P51532 1647 aa18.54■□□□□ 0.56
TMCO1-201ENST00000367881 MROH2BQ7Z745 1585 aa18.53■□□□□ 0.56
TMCO1-201ENST00000367881 RSF1Q96T23 1441 aaPredicted RBP18.5■□□□□ 0.55
TMCO1-201ENST00000367881 SUPT5HO00267 1087 aaKnown RBP18.5■□□□□ 0.55
TMCO1-201ENST00000367881 EIF4G1Q04637 1599 aaKnown RBP18.42■□□□□ 0.54
TMCO1-201ENST00000367881 WIZO95785 1651 aa18.42■□□□□ 0.54
TMCO1-201ENST00000367881 PEG3Q9GZU2 1588 aa18.31■□□□□ 0.52
TMCO1-201ENST00000367881 SMARCA2P51531 1590 aa18.25■□□□□ 0.51
TMCO1-201ENST00000367881 ATAD2BQ9ULI0 1458 aa18.24■□□□□ 0.51
TMCO1-201ENST00000367881 CC2D2AQ9P2K1 1620 aa18.21■□□□□ 0.51
TMCO1-201ENST00000367881 TOP2AP11388 1531 aaKnown RBP18.19■□□□□ 0.5
TMCO1-201ENST00000367881 BAZ1BQ9UIG0 1483 aaKnown RBP18.13■□□□□ 0.49
TMCO1-201ENST00000367881 HMGXB3Q12766 1538 aa18.11■□□□□ 0.49
TMCO1-201ENST00000367881 NCAPD3P42695 1498 aa18.11■□□□□ 0.49
TMCO1-201ENST00000367881 CCDC88BA6NC98 1476 aa17.97■□□□□ 0.47
TMCO1-201ENST00000367881 DNAJC5BQ9UF47 199 aa17.87■□□□□ 0.45
TMCO1-201ENST00000367881 PRDM2Q13029 1718 aa17.71■□□□□ 0.43
TMCO1-201ENST00000367881 CFTRP13569 1480 aa17.65■□□□□ 0.42
TMCO1-201ENST00000367881 CADPSQ9ULU8 1353 aa17.61■□□□□ 0.41
TMCO1-201ENST00000367881 LAMC3Q9Y6N6 1575 aa17.59■□□□□ 0.41
TMCO1-201ENST00000367881 HRCP23327 699 aa17.57■□□□□ 0.4
TMCO1-201ENST00000367881 NESP48681 1621 aa17.57■□□□□ 0.4
TMCO1-201ENST00000367881 ABCC8Q09428 1581 aa17.55■□□□□ 0.4
TMCO1-201ENST00000367881 FANCD2Q9BXW9 1451 aa17.45■□□□□ 0.38
TMCO1-201ENST00000367881 KIF21AQ7Z4S6 1674 aa17.44■□□□□ 0.38
TMCO1-201ENST00000367881 WRNQ14191 1432 aaPredicted RBP eCLIP17.43■□□□□ 0.38
TMCO1-201ENST00000367881 TRIM41Q8WV44 630 aa17.42■□□□□ 0.38
TMCO1-201ENST00000367881 SYNJ1O43426 1573 aa17.41■□□□□ 0.38
TMCO1-201ENST00000367881 PHF23Q9BUL5 403 aaPredicted RBP17.41■□□□□ 0.38
TMCO1-201ENST00000367881 PDS5BQ9NTI5 1447 aa17.4■□□□□ 0.38
TMCO1-201ENST00000367881 BIVM-ERCC5R4GMW8 1640 aa17.38■□□□□ 0.37
TMCO1-201ENST00000367881 CEP164Q9UPV0 1460 aa17.37■□□□□ 0.37
TMCO1-201ENST00000367881 TOP2BQ02880 1626 aa17.36■□□□□ 0.37
TMCO1-201ENST00000367881 CUX1P39880 1505 aa17.35■□□□□ 0.37
TMCO1-201ENST00000367881 PCGF6Q9BYE7 350 aa17.29■□□□□ 0.36
TMCO1-201ENST00000367881 DNMBPQ6XZF7 1577 aa17.28■□□□□ 0.36
TMCO1-201ENST00000367881 URB2Q14146 1524 aaKnown RBP17.25■□□□□ 0.35
TMCO1-201ENST00000367881 SENP3Q9H4L4 574 aaPredicted RBP17.25■□□□□ 0.35
TMCO1-201ENST00000367881 TOPBP1Q92547 1522 aa17.25■□□□□ 0.35
TMCO1-201ENST00000367881 ERCC6Q03468 1493 aa17.24■□□□□ 0.35
TMCO1-201ENST00000367881 MRC2Q9UBG0 1479 aa17.21■□□□□ 0.35
TMCO1-201ENST00000367881 FGD5Q6ZNL6 1462 aa17.19■□□□□ 0.34
TMCO1-201ENST00000367881 THOC2Q8NI27 1593 aaKnown RBP17.18■□□□□ 0.34
TMCO1-201ENST00000367881 WDR62O43379 1518 aa17.15■□□□□ 0.34
TMCO1-201ENST00000367881 POLA1P09884 1462 aaPredicted RBP17.14■□□□□ 0.33
TMCO1-201ENST00000367881 SOGA1O94964 1423 aa17.13■□□□□ 0.33
TMCO1-201ENST00000367881 RUSC2Q8N2Y8 1516 aa17.09■□□□□ 0.33
TMCO1-201ENST00000367881 TRIM26Q12899 539 aaPredicted RBP17.09■□□□□ 0.33
TMCO1-201ENST00000367881 FAM9AQ8IZU1 332 aaPredicted RBP17.09■□□□□ 0.33
TMCO1-201ENST00000367881 WDR97A6NE52 1622 aa17.09■□□□□ 0.33
TMCO1-201ENST00000367881 RAD54L2Q9Y4B4 1467 aa17.06■□□□□ 0.32
TMCO1-201ENST00000367881 LOC105371045A0A1W2PR82 267 aa17.06■□□□□ 0.32
TMCO1-201ENST00000367881 EEA1Q15075 1411 aa17.06■□□□□ 0.32
TMCO1-201ENST00000367881 TARBP1Q13395 1621 aaKnown RBP17.04■□□□□ 0.32
TMCO1-201ENST00000367881 ABCA10Q8WWZ4 1543 aa17.03■□□□□ 0.32
TMCO1-201ENST00000367881 CUX2O14529 1486 aa17.02■□□□□ 0.32
TMCO1-201ENST00000367881 KIF27Q86VH2 1401 aa17■□□□□ 0.31
TMCO1-201ENST00000367881 ABCA5Q8WWZ7 1642 aa16.96■□□□□ 0.31
TMCO1-201ENST00000367881 CSRNP3Q8WYN3 585 aa16.96■□□□□ 0.3
TMCO1-201ENST00000367881 IFT140Q96RY7 1462 aa16.96■□□□□ 0.3
TMCO1-201ENST00000367881 ZEB1P37275 1124 aaPredicted RBP16.93■□□□□ 0.3
TMCO1-201ENST00000367881 PPARGC1BQ86YN6 1023 aaKnown RBP16.93■□□□□ 0.3
TMCO1-201ENST00000367881 KIF21BO75037 1637 aa16.91■□□□□ 0.3
TMCO1-201ENST00000367881 PBRM1Q86U86 1689 aa16.91■□□□□ 0.3
TMCO1-201ENST00000367881 TDRD9Q8NDG6 1382 aaKnown RBP16.9■□□□□ 0.3
TMCO1-201ENST00000367881 GAPVD1Q14C86 1478 aa16.89■□□□□ 0.29
TMCO1-201ENST00000367881 ZNF608Q9ULD9 1512 aaPredicted RBP16.87■□□□□ 0.29
TMCO1-201ENST00000367881 EIF4G3O43432 1585 aaKnown RBP16.87■□□□□ 0.29
TMCO1-201ENST00000367881 IGF1RP08069 1367 aa16.85■□□□□ 0.29
TMCO1-201ENST00000367881 EHMT2Q96KQ7 1210 aa16.85■□□□□ 0.29
TMCO1-201ENST00000367881 CUL7Q14999 1698 aa16.85■□□□□ 0.29
TMCO1-201ENST00000367881 ERICH3Q5RHP9 1530 aa16.84■□□□□ 0.29
TMCO1-201ENST00000367881 AQRO60306 1485 aaKnown RBP eCLIP16.84■□□□□ 0.291e-7■■■■■ 30.4
TMCO1-201ENST00000367881 PRXQ9BXM0 1461 aa16.84■□□□□ 0.29
TMCO1-201ENST00000367881 GOLGA3Q08378 1498 aa16.82■□□□□ 0.28
TMCO1-201ENST00000367881 RAPGEF2Q9Y4G8 1499 aa16.81■□□□□ 0.28
TMCO1-201ENST00000367881 GRIN2BQ13224 1484 aa16.78■□□□□ 0.28
TMCO1-201ENST00000367881 CARMIL1Q5VZK9 1371 aa16.78■□□□□ 0.28
TMCO1-201ENST00000367881 ADAMTS12P58397 1594 aa16.75■□□□□ 0.27
TMCO1-201ENST00000367881 UBTFP17480 764 aaKnown RBP16.72■□□□□ 0.27
TMCO1-201ENST00000367881 SNAPC4Q5SXM2 1469 aa16.7■□□□□ 0.26
TMCO1-201ENST00000367881 TNIKQ9UKE5 1360 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms