RNA–Protein interactions for RNA: ENST00000464650.5

TMCO1-203, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 2 BASIC

Gene TMCO1, Length 1,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-203ENST00000464650 NISCHQ9Y2I1 1504 aa31.39■■■□□ 2.61
TMCO1-203ENST00000464650 CCDC180Q9P1Z9 1646 aa27.91■■■□□ 2.06
TMCO1-203ENST00000464650 ABCC9O60706 1549 aa27.81■■■□□ 2.04
TMCO1-203ENST00000464650 DCAF8L2P0C7V8 631 aa26.55■■□□□ 1.84
TMCO1-203ENST00000464650 RB1CC1Q8TDY2 1594 aa26.49■■□□□ 1.83
TMCO1-203ENST00000464650 NACADO15069 1562 aa26.39■■□□□ 1.82
TMCO1-203ENST00000464650 MYO15BQ96JP2 1530 aa26.09■■□□□ 1.77
TMCO1-203ENST00000464650 PABPN1Q86U42 306 aaKnown RBP eCLIP26.04■■□□□ 1.76
TMCO1-203ENST00000464650 ZCCHC6Q5VYS8 1495 aaKnown RBP26.03■■□□□ 1.76
TMCO1-203ENST00000464650 DNAJC5BQ9UF47 199 aa25.99■■□□□ 1.75
TMCO1-203ENST00000464650 UNC13AQ9UPW8 1703 aa25.89■■□□□ 1.74
TMCO1-203ENST00000464650 DCAF1Q9Y4B6 1507 aa25.88■■□□□ 1.73
TMCO1-203ENST00000464650 BICRAQ9NZM4 1560 aa25.77■■□□□ 1.72
TMCO1-203ENST00000464650 SCRIBQ14160 1630 aa25.54■■□□□ 1.68
TMCO1-203ENST00000464650 SHROOM4Q9ULL8 1493 aa25.32■■□□□ 1.64
TMCO1-203ENST00000464650 EIF4G1Q04637 1599 aaKnown RBP25.08■■□□□ 1.61
TMCO1-203ENST00000464650 CC2D2AQ9P2K1 1620 aa25.08■■□□□ 1.6
TMCO1-203ENST00000464650 CECR2Q9BXF3 1484 aa24.99■■□□□ 1.59
TMCO1-203ENST00000464650 NCAPD3P42695 1498 aa24.43■■□□□ 1.5
TMCO1-203ENST00000464650 ATAD2BQ9ULI0 1458 aa24.39■■□□□ 1.5
TMCO1-203ENST00000464650 SMARCA4P51532 1647 aa24.38■■□□□ 1.49
TMCO1-203ENST00000464650 BAZ1AQ9NRL2 1556 aaPredicted RBP24.29■■□□□ 1.48
TMCO1-203ENST00000464650 SMARCA2P51531 1590 aa24.26■■□□□ 1.47
TMCO1-203ENST00000464650 MROH2BQ7Z745 1585 aa24.22■■□□□ 1.47
TMCO1-203ENST00000464650 HMGXB3Q12766 1538 aa24.17■■□□□ 1.46
TMCO1-203ENST00000464650 BAZ1BQ9UIG0 1483 aaKnown RBP24.13■■□□□ 1.45
TMCO1-203ENST00000464650 PEG3Q9GZU2 1588 aa24.12■■□□□ 1.45
TMCO1-203ENST00000464650 NESP48681 1621 aa23.99■■□□□ 1.43
TMCO1-203ENST00000464650 ERCC6Q03468 1493 aa23.94■■□□□ 1.42
TMCO1-203ENST00000464650 WIZO95785 1651 aa23.92■■□□□ 1.42
TMCO1-203ENST00000464650 RSF1Q96T23 1441 aaPredicted RBP23.84■■□□□ 1.41
TMCO1-203ENST00000464650 CUX2O14529 1486 aa23.75■■□□□ 1.39
TMCO1-203ENST00000464650 LAMC3Q9Y6N6 1575 aa23.75■■□□□ 1.39
TMCO1-203ENST00000464650 CADPSQ9ULU8 1353 aa23.72■■□□□ 1.39
TMCO1-203ENST00000464650 PDS5BQ9NTI5 1447 aa23.66■■□□□ 1.38
TMCO1-203ENST00000464650 DNAJC5Q9H3Z4 198 aa23.59■■□□□ 1.37
TMCO1-203ENST00000464650 KIF21AQ7Z4S6 1674 aa23.59■■□□□ 1.37
TMCO1-203ENST00000464650 TOP2AP11388 1531 aaKnown RBP23.59■■□□□ 1.37
TMCO1-203ENST00000464650 THOC2Q8NI27 1593 aaKnown RBP23.57■■□□□ 1.36
TMCO1-203ENST00000464650 CFTRP13569 1480 aa23.48■■□□□ 1.35
TMCO1-203ENST00000464650 FANCD2Q9BXW9 1451 aa23.42■■□□□ 1.34
TMCO1-203ENST00000464650 MRC2Q9UBG0 1479 aa23.42■■□□□ 1.34
TMCO1-203ENST00000464650 CCDC88BA6NC98 1476 aa23.41■■□□□ 1.34
TMCO1-203ENST00000464650 CEP164Q9UPV0 1460 aa23.37■■□□□ 1.33
TMCO1-203ENST00000464650 WDR62O43379 1518 aa23.33■■□□□ 1.32
TMCO1-203ENST00000464650 URB2Q14146 1524 aaKnown RBP23.22■■□□□ 1.31
TMCO1-203ENST00000464650 PRDM2Q13029 1718 aa23.11■■□□□ 1.29
TMCO1-203ENST00000464650 SUPT5HO00267 1087 aaKnown RBP23.11■■□□□ 1.29
TMCO1-203ENST00000464650 TOPBP1Q92547 1522 aa23■■□□□ 1.27
TMCO1-203ENST00000464650 AEBP2Q6ZN18 517 aaPredicted RBP22.94■■□□□ 1.26
TMCO1-203ENST00000464650 ABCC8Q09428 1581 aa22.93■■□□□ 1.26
TMCO1-203ENST00000464650 IFT140Q96RY7 1462 aa22.92■■□□□ 1.26
TMCO1-203ENST00000464650 ZNF608Q9ULD9 1512 aaPredicted RBP22.91■■□□□ 1.26
TMCO1-203ENST00000464650 DNMBPQ6XZF7 1577 aa22.89■■□□□ 1.26
TMCO1-203ENST00000464650 OSCARQ8IYS5 282 aa22.87■■□□□ 1.25
TMCO1-203ENST00000464650 POLA1P09884 1462 aaPredicted RBP22.78■■□□□ 1.24
TMCO1-203ENST00000464650 AQRO60306 1485 aaKnown RBP eCLIP22.77■■□□□ 1.241e-7■■■■■ 30.4
TMCO1-203ENST00000464650 RAD54L2Q9Y4B4 1467 aa22.76■■□□□ 1.23
TMCO1-203ENST00000464650 TARBP1Q13395 1621 aaKnown RBP22.75■■□□□ 1.23
TMCO1-203ENST00000464650 SOGA1O94964 1423 aa22.74■■□□□ 1.23
TMCO1-203ENST00000464650 CUX1P39880 1505 aa22.72■■□□□ 1.23
TMCO1-203ENST00000464650 EIF4G3O43432 1585 aaKnown RBP22.69■■□□□ 1.22
TMCO1-203ENST00000464650 TDRD9Q8NDG6 1382 aaKnown RBP22.69■■□□□ 1.22
TMCO1-203ENST00000464650 FGD5Q6ZNL6 1462 aa22.68■■□□□ 1.22
TMCO1-203ENST00000464650 TRIM41Q8WV44 630 aa22.68■■□□□ 1.22
TMCO1-203ENST00000464650 FBLN2P98095 1184 aa22.6■■□□□ 1.21
TMCO1-203ENST00000464650 CHD1O14646 1710 aa22.48■■□□□ 1.19
TMCO1-203ENST00000464650 SNAPC4Q5SXM2 1469 aa22.47■■□□□ 1.19
TMCO1-203ENST00000464650 CHMP7Q8WUX9 453 aaPredicted RBP22.46■■□□□ 1.19
TMCO1-203ENST00000464650 WRNQ14191 1432 aaPredicted RBP eCLIP22.45■■□□□ 1.18
TMCO1-203ENST00000464650 GRIN2BQ13224 1484 aa22.45■■□□□ 1.18
TMCO1-203ENST00000464650 WDR97A6NE52 1622 aa22.44■■□□□ 1.18
TMCO1-203ENST00000464650 RIMBP3CA6NJZ7 1639 aa22.42■■□□□ 1.18
TMCO1-203ENST00000464650 RIMBP3BA6NNM3 1639 aa22.42■■□□□ 1.18
TMCO1-203ENST00000464650 RIMBP3Q9UFD9 1639 aa22.42■■□□□ 1.18
TMCO1-203ENST00000464650 ABCA10Q8WWZ4 1543 aa22.42■■□□□ 1.18
TMCO1-203ENST00000464650 GAPVD1Q14C86 1478 aa22.42■■□□□ 1.18
TMCO1-203ENST00000464650 SYNJ1O43426 1573 aa22.39■■□□□ 1.18
TMCO1-203ENST00000464650 ARHGEF11O15085 1522 aa22.39■■□□□ 1.17
TMCO1-203ENST00000464650 TOP2BQ02880 1626 aa22.39■■□□□ 1.17
TMCO1-203ENST00000464650 MAGI1Q96QZ7 1491 aaPredicted RBP22.38■■□□□ 1.17
TMCO1-203ENST00000464650 BIVM-ERCC5R4GMW8 1640 aa22.35■■□□□ 1.17
TMCO1-203ENST00000464650 CYB5RLQ6IPT4 315 aa22.35■■□□□ 1.17
TMCO1-203ENST00000464650 SYNJ2O15056 1496 aa22.34■■□□□ 1.17
TMCO1-203ENST00000464650 ABCA5Q8WWZ7 1642 aa22.32■■□□□ 1.16
TMCO1-203ENST00000464650 PBRM1Q86U86 1689 aa22.3■■□□□ 1.16
TMCO1-203ENST00000464650 CLASP1Q7Z460 1538 aa22.25■■□□□ 1.15
TMCO1-203ENST00000464650 ARAP1Q96P48 1450 aa22.21■■□□□ 1.15
TMCO1-203ENST00000464650 GRIN2AQ12879 1464 aa22.15■■□□□ 1.14
TMCO1-203ENST00000464650 FHAD1B1AJZ9 1412 aa22.14■■□□□ 1.14
TMCO1-203ENST00000464650 ADAMTS12P58397 1594 aa22.12■■□□□ 1.13
TMCO1-203ENST00000464650 ERICH3Q5RHP9 1530 aa22.12■■□□□ 1.13
TMCO1-203ENST00000464650 NUP160Q12769 1436 aa22.07■■□□□ 1.12
TMCO1-203ENST00000464650 CEP170Q5SW79 1584 aa22.06■■□□□ 1.12
TMCO1-203ENST00000464650 IGF1RP08069 1367 aa22.04■■□□□ 1.12
TMCO1-203ENST00000464650 KIF27Q86VH2 1401 aa22■■□□□ 1.11
TMCO1-203ENST00000464650 ERCC6L2Q5T890 1561 aa21.99■■□□□ 1.11
TMCO1-203ENST00000464650 TRHP20396 242 aaPredicted RBP21.98■■□□□ 1.11
TMCO1-203ENST00000464650 JPH4Q96JJ6 628 aa21.96■■□□□ 1.11
TMCO1-203ENST00000464650 SHROOM2Q13796 1616 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms