RNA–Protein interactions for RNA: ENST00000392129.10

TMCO1-202, Transcript of transmembrane and coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO1, Length 1,946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-202ENST00000392129 NISCHQ9Y2I1 1504 aa27.61■■■□□ 2.01
TMCO1-202ENST00000392129 CCDC180Q9P1Z9 1646 aa23.97■■□□□ 1.43
TMCO1-202ENST00000392129 ZCCHC6Q5VYS8 1495 aaKnown RBP23.19■■□□□ 1.3
TMCO1-202ENST00000392129 DCAF8L2P0C7V8 631 aa22.86■■□□□ 1.25
TMCO1-202ENST00000392129 DCAF1Q9Y4B6 1507 aa22.81■■□□□ 1.24
TMCO1-202ENST00000392129 ABCC9O60706 1549 aa22.7■■□□□ 1.23
TMCO1-202ENST00000392129 SHROOM4Q9ULL8 1493 aa22.59■■□□□ 1.21
TMCO1-202ENST00000392129 MYO15BQ96JP2 1530 aa22.53■■□□□ 1.2
TMCO1-202ENST00000392129 NACADO15069 1562 aa22.36■■□□□ 1.17
TMCO1-202ENST00000392129 RB1CC1Q8TDY2 1594 aa22.15■■□□□ 1.14
TMCO1-202ENST00000392129 SCRIBQ14160 1630 aa22.09■■□□□ 1.13
TMCO1-202ENST00000392129 SUPT5HO00267 1087 aaKnown RBP21.8■■□□□ 1.08
TMCO1-202ENST00000392129 UNC13AQ9UPW8 1703 aa21.66■■□□□ 1.06
TMCO1-202ENST00000392129 BICRAQ9NZM4 1560 aa21.5■■□□□ 1.03
TMCO1-202ENST00000392129 PABPN1Q86U42 306 aaKnown RBP eCLIP21.48■■□□□ 1.03
TMCO1-202ENST00000392129 CECR2Q9BXF3 1484 aa21.48■■□□□ 1.03
TMCO1-202ENST00000392129 RSF1Q96T23 1441 aaPredicted RBP21.47■■□□□ 1.03
TMCO1-202ENST00000392129 MROH2BQ7Z745 1585 aa21.34■■□□□ 1.01
TMCO1-202ENST00000392129 BAZ1AQ9NRL2 1556 aaPredicted RBP21.3■■□□□ 1
TMCO1-202ENST00000392129 SMARCA4P51532 1647 aa21.18■□□□□ 0.98
TMCO1-202ENST00000392129 WIZO95785 1651 aa21.13■□□□□ 0.97
TMCO1-202ENST00000392129 PEG3Q9GZU2 1588 aa20.93■□□□□ 0.94
TMCO1-202ENST00000392129 TOP2AP11388 1531 aaKnown RBP20.92■□□□□ 0.94
TMCO1-202ENST00000392129 CHIC1Q5VXU3 224 aa20.9■□□□□ 0.94
TMCO1-202ENST00000392129 ATAD2BQ9ULI0 1458 aa20.86■□□□□ 0.93
TMCO1-202ENST00000392129 EIF4G1Q04637 1599 aaKnown RBP20.85■□□□□ 0.93
TMCO1-202ENST00000392129 SMARCA2P51531 1590 aa20.83■□□□□ 0.92
TMCO1-202ENST00000392129 CCDC88BA6NC98 1476 aa20.75■□□□□ 0.91
TMCO1-202ENST00000392129 BAZ1BQ9UIG0 1483 aaKnown RBP20.73■□□□□ 0.91
TMCO1-202ENST00000392129 NCAPD3P42695 1498 aa20.68■□□□□ 0.9
TMCO1-202ENST00000392129 HMGXB3Q12766 1538 aa20.61■□□□□ 0.89
TMCO1-202ENST00000392129 CC2D2AQ9P2K1 1620 aa20.52■□□□□ 0.87
TMCO1-202ENST00000392129 TRIM41Q8WV44 630 aa20.49■□□□□ 0.87
TMCO1-202ENST00000392129 ABCC8Q09428 1581 aa20.3■□□□□ 0.84
TMCO1-202ENST00000392129 CFTRP13569 1480 aa20.24■□□□□ 0.83
TMCO1-202ENST00000392129 WRNQ14191 1432 aaPredicted RBP eCLIP20.2■□□□□ 0.82
TMCO1-202ENST00000392129 CADPSQ9ULU8 1353 aa20.18■□□□□ 0.82
TMCO1-202ENST00000392129 FAM9AQ8IZU1 332 aaPredicted RBP20.12■□□□□ 0.81
TMCO1-202ENST00000392129 LOC105371045A0A1W2PR82 267 aa20.12■□□□□ 0.81
TMCO1-202ENST00000392129 DNAJC5BQ9UF47 199 aa20.09■□□□□ 0.81
TMCO1-202ENST00000392129 SYNJ1O43426 1573 aa20.07■□□□□ 0.8
TMCO1-202ENST00000392129 PRDM2Q13029 1718 aa20.01■□□□□ 0.79
TMCO1-202ENST00000392129 TOP2BQ02880 1626 aa19.99■□□□□ 0.79
TMCO1-202ENST00000392129 SOGA1O94964 1423 aa19.98■□□□□ 0.79
TMCO1-202ENST00000392129 NESP48681 1621 aa19.96■□□□□ 0.79
TMCO1-202ENST00000392129 CUX1P39880 1505 aa19.94■□□□□ 0.78
TMCO1-202ENST00000392129 BIVM-ERCC5R4GMW8 1640 aa19.94■□□□□ 0.78
TMCO1-202ENST00000392129 LAMC3Q9Y6N6 1575 aa19.92■□□□□ 0.78
TMCO1-202ENST00000392129 FANCD2Q9BXW9 1451 aa19.92■□□□□ 0.78
TMCO1-202ENST00000392129 EEA1Q15075 1411 aa19.92■□□□□ 0.78
TMCO1-202ENST00000392129 RUSC2Q8N2Y8 1516 aa19.89■□□□□ 0.77
TMCO1-202ENST00000392129 CSRNP3Q8WYN3 585 aa19.86■□□□□ 0.77
TMCO1-202ENST00000392129 EHMT2Q96KQ7 1210 aa19.83■□□□□ 0.77
TMCO1-202ENST00000392129 PDS5BQ9NTI5 1447 aa19.82■□□□□ 0.76
TMCO1-202ENST00000392129 CEP164Q9UPV0 1460 aa19.78■□□□□ 0.76
TMCO1-202ENST00000392129 DNMBPQ6XZF7 1577 aa19.72■□□□□ 0.75
TMCO1-202ENST00000392129 FGD5Q6ZNL6 1462 aa19.71■□□□□ 0.75
TMCO1-202ENST00000392129 TOPBP1Q92547 1522 aa19.7■□□□□ 0.74
TMCO1-202ENST00000392129 KIF27Q86VH2 1401 aa19.68■□□□□ 0.74
TMCO1-202ENST00000392129 URB2Q14146 1524 aaKnown RBP19.67■□□□□ 0.74
TMCO1-202ENST00000392129 GOLGA3Q08378 1498 aa19.65■□□□□ 0.74
TMCO1-202ENST00000392129 KIF21AQ7Z4S6 1674 aa19.65■□□□□ 0.74
TMCO1-202ENST00000392129 TNIKQ9UKE5 1360 aa19.63■□□□□ 0.73
TMCO1-202ENST00000392129 POLA1P09884 1462 aaPredicted RBP19.62■□□□□ 0.73
TMCO1-202ENST00000392129 KIF21BO75037 1637 aa19.62■□□□□ 0.73
TMCO1-202ENST00000392129 CUX2O14529 1486 aa19.61■□□□□ 0.73
TMCO1-202ENST00000392129 UBTFP17480 764 aaKnown RBP19.61■□□□□ 0.73
TMCO1-202ENST00000392129 RAD54L2Q9Y4B4 1467 aa19.57■□□□□ 0.72
TMCO1-202ENST00000392129 PRXQ9BXM0 1461 aa19.56■□□□□ 0.72
TMCO1-202ENST00000392129 RAPGEF2Q9Y4G8 1499 aa19.56■□□□□ 0.72
TMCO1-202ENST00000392129 ABCA10Q8WWZ4 1543 aa19.55■□□□□ 0.72
TMCO1-202ENST00000392129 IGF1RP08069 1367 aa19.54■□□□□ 0.72
TMCO1-202ENST00000392129 MRC2Q9UBG0 1479 aa19.53■□□□□ 0.72
TMCO1-202ENST00000392129 CEP162Q5TB80 1403 aa19.5■□□□□ 0.71
TMCO1-202ENST00000392129 ERICH3Q5RHP9 1530 aa19.5■□□□□ 0.71
TMCO1-202ENST00000392129 ERCC6Q03468 1493 aa19.45■□□□□ 0.7
TMCO1-202ENST00000392129 CARMIL1Q5VZK9 1371 aa19.43■□□□□ 0.7
TMCO1-202ENST00000392129 WDR62O43379 1518 aa19.41■□□□□ 0.7
TMCO1-202ENST00000392129 WDR97A6NE52 1622 aa19.4■□□□□ 0.7
TMCO1-202ENST00000392129 TDRD9Q8NDG6 1382 aaKnown RBP19.4■□□□□ 0.7
TMCO1-202ENST00000392129 TARBP1Q13395 1621 aaKnown RBP19.38■□□□□ 0.69
TMCO1-202ENST00000392129 GAPVD1Q14C86 1478 aa19.35■□□□□ 0.69
TMCO1-202ENST00000392129 CLIP1P30622 1438 aa19.35■□□□□ 0.69
TMCO1-202ENST00000392129 ABCA5Q8WWZ7 1642 aa19.34■□□□□ 0.69
TMCO1-202ENST00000392129 IFT140Q96RY7 1462 aa19.32■□□□□ 0.68
TMCO1-202ENST00000392129 THOC2Q8NI27 1593 aaKnown RBP19.31■□□□□ 0.68
TMCO1-202ENST00000392129 RANGAP1P46060 587 aaPredicted RBP19.28■□□□□ 0.68
TMCO1-202ENST00000392129 CUL7Q14999 1698 aa19.28■□□□□ 0.68
TMCO1-202ENST00000392129 AQRO60306 1485 aaKnown RBP eCLIP19.25■□□□□ 0.671e-7■■■■■ 30.4
TMCO1-202ENST00000392129 PCGF6Q9BYE7 350 aa19.23■□□□□ 0.67
TMCO1-202ENST00000392129 ZNF608Q9ULD9 1512 aaPredicted RBP19.22■□□□□ 0.67
TMCO1-202ENST00000392129 TRIM26Q12899 539 aaPredicted RBP19.21■□□□□ 0.67
TMCO1-202ENST00000392129 GRIN2BQ13224 1484 aa19.19■□□□□ 0.66
TMCO1-202ENST00000392129 VPS8Q8N3P4 1428 aa19.18■□□□□ 0.66
TMCO1-202ENST00000392129 PPARGC1BQ86YN6 1023 aaKnown RBP19.15■□□□□ 0.66
TMCO1-202ENST00000392129 PBRM1Q86U86 1689 aa19.15■□□□□ 0.66
TMCO1-202ENST00000392129 FHAD1B1AJZ9 1412 aa19.15■□□□□ 0.66
TMCO1-202ENST00000392129 ARAP1Q96P48 1450 aa19.13■□□□□ 0.65
TMCO1-202ENST00000392129 ARHGAP35Q9NRY4 1499 aa19.13■□□□□ 0.65
TMCO1-202ENST00000392129 EIF4G3O43432 1585 aaKnown RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms