RNA–Protein interactions for RNA: ENST00000462738.1

PLXNB1-206, Transcript of plexin B1, humanhuman

TSL 2

Gene PLXNB1, Length 663 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-206ENST00000462738 NISCHQ9Y2I1 1504 aa50.75■■■■■ 5.71
PLXNB1-206ENST00000462738 CCDC180Q9P1Z9 1646 aa45.5■■■■■ 4.87
PLXNB1-206ENST00000462738 ABCC9O60706 1549 aa45.06■■■■■ 4.8
PLXNB1-206ENST00000462738 RB1CC1Q8TDY2 1594 aa43.11■■■■■ 4.49
PLXNB1-206ENST00000462738 NACADO15069 1562 aa42.9■■■■■ 4.46
PLXNB1-206ENST00000462738 MYO15BQ96JP2 1530 aa42.47■■■■■ 4.39
PLXNB1-206ENST00000462738 DCAF8L2P0C7V8 631 aa42.45■■■■■ 4.39
PLXNB1-206ENST00000462738 ZCCHC6Q5VYS8 1495 aaKnown RBP42.18■■■■■ 4.34
PLXNB1-206ENST00000462738 UNC13AQ9UPW8 1703 aa42.09■■■■■ 4.33
PLXNB1-206ENST00000462738 DCAF1Q9Y4B6 1507 aa42.02■■■■■ 4.32
PLXNB1-206ENST00000462738 DNAJC5BQ9UF47 199 aa41.92■■■■■ 4.3
PLXNB1-206ENST00000462738 PABPN1Q86U42 306 aaKnown RBP eCLIP41.9■■■■■ 4.31e-9■□□□□ 10.5
PLXNB1-206ENST00000462738 BICRAQ9NZM4 1560 aa41.84■■■■■ 4.29
PLXNB1-206ENST00000462738 SHROOM4Q9ULL8 1493 aa41.44■■■■■ 4.22
PLXNB1-206ENST00000462738 SCRIBQ14160 1630 aa41.38■■■■■ 4.21
PLXNB1-206ENST00000462738 EIF4G1Q04637 1599 aaKnown RBP40.79■■■■■ 4.12
PLXNB1-206ENST00000462738 CC2D2AQ9P2K1 1620 aa40.77■■■■■ 4.12
PLXNB1-206ENST00000462738 CECR2Q9BXF3 1484 aa40.6■■■■■ 4.09
PLXNB1-206ENST00000462738 NCAPD3P42695 1498 aa39.58■■■■□ 3.93
PLXNB1-206ENST00000462738 SMARCA4P51532 1647 aa39.54■■■■□ 3.92
PLXNB1-206ENST00000462738 ATAD2BQ9ULI0 1458 aa39.49■■■■□ 3.91
PLXNB1-206ENST00000462738 SMARCA2P51531 1590 aa39.43■■■■□ 3.9
PLXNB1-206ENST00000462738 BAZ1AQ9NRL2 1556 aaPredicted RBP39.41■■■■□ 3.9
PLXNB1-206ENST00000462738 HMGXB3Q12766 1538 aa39.38■■■■□ 3.89
PLXNB1-206ENST00000462738 PEG3Q9GZU2 1588 aa39.22■■■■□ 3.87
PLXNB1-206ENST00000462738 BAZ1BQ9UIG0 1483 aaKnown RBP39.12■■■■□ 3.85
PLXNB1-206ENST00000462738 MROH2BQ7Z745 1585 aa39.08■■■■□ 3.85
PLXNB1-206ENST00000462738 ERCC6Q03468 1493 aa38.91■■■■□ 3.82
PLXNB1-206ENST00000462738 CUX2O14529 1486 aa38.81■■■■□ 3.8
PLXNB1-206ENST00000462738 NESP48681 1621 aa38.79■■■■□ 3.8
PLXNB1-206ENST00000462738 LAMC3Q9Y6N6 1575 aa38.66■■■■□ 3.78
PLXNB1-206ENST00000462738 WIZO95785 1651 aa38.61■■■■□ 3.77
PLXNB1-206ENST00000462738 THOC2Q8NI27 1593 aaKnown RBP38.46■■■■□ 3.75
PLXNB1-206ENST00000462738 PDS5BQ9NTI5 1447 aa38.38■■■■□ 3.74
PLXNB1-206ENST00000462738 RSF1Q96T23 1441 aaPredicted RBP38.38■■■■□ 3.73
PLXNB1-206ENST00000462738 CADPSQ9ULU8 1353 aa38.35■■■■□ 3.73
PLXNB1-206ENST00000462738 KIF21AQ7Z4S6 1674 aa38.35■■■■□ 3.73
PLXNB1-206ENST00000462738 DNAJC5Q9H3Z4 198 aa38.31■■■■□ 3.72
PLXNB1-206ENST00000462738 TOP2AP11388 1531 aaKnown RBP38.22■■■■□ 3.71
PLXNB1-206ENST00000462738 MRC2Q9UBG0 1479 aa38.07■■■■□ 3.68
PLXNB1-206ENST00000462738 CFTRP13569 1480 aa38.02■■■■□ 3.68
PLXNB1-206ENST00000462738 WDR62O43379 1518 aa38.01■■■■□ 3.67
PLXNB1-206ENST00000462738 CEP164Q9UPV0 1460 aa37.97■■■■□ 3.67
PLXNB1-206ENST00000462738 FANCD2Q9BXW9 1451 aa37.93■■■■□ 3.66
PLXNB1-206ENST00000462738 CCDC88BA6NC98 1476 aa37.71■■■■□ 3.63
PLXNB1-206ENST00000462738 PRDM2Q13029 1718 aa37.69■■■■□ 3.62
PLXNB1-206ENST00000462738 URB2Q14146 1524 aaKnown RBP37.61■■■■□ 3.61
PLXNB1-206ENST00000462738 TOPBP1Q92547 1522 aa37.26■■■■□ 3.55
PLXNB1-206ENST00000462738 ABCC8Q09428 1581 aa37.21■■■■□ 3.55
PLXNB1-206ENST00000462738 IFT140Q96RY7 1462 aa37.2■■■■□ 3.54
PLXNB1-206ENST00000462738 DNMBPQ6XZF7 1577 aa37.18■■■■□ 3.54
PLXNB1-206ENST00000462738 ZNF608Q9ULD9 1512 aaPredicted RBP37.06■■■■□ 3.52
PLXNB1-206ENST00000462738 EIF4G3O43432 1585 aaKnown RBP36.95■■■■□ 3.51
PLXNB1-206ENST00000462738 OSCARQ8IYS5 282 aa36.94■■■■□ 3.5
PLXNB1-206ENST00000462738 TARBP1Q13395 1621 aaKnown RBP36.92■■■■□ 3.5
PLXNB1-206ENST00000462738 POLA1P09884 1462 aaPredicted RBP36.9■■■■□ 3.5
PLXNB1-206ENST00000462738 AQRO60306 1485 aaKnown RBP eCLIP36.73■■■■□ 3.474e-9■■■□□ 16.2
PLXNB1-206ENST00000462738 SUPT5HO00267 1087 aaKnown RBP36.72■■■■□ 3.47
PLXNB1-206ENST00000462738 CUX1P39880 1505 aa36.72■■■■□ 3.47
PLXNB1-206ENST00000462738 FGD5Q6ZNL6 1462 aa36.7■■■■□ 3.47
PLXNB1-206ENST00000462738 TRIM41Q8WV44 630 aa36.7■■■■□ 3.47
PLXNB1-206ENST00000462738 RAD54L2Q9Y4B4 1467 aa36.69■■■■□ 3.46
PLXNB1-206ENST00000462738 SOGA1O94964 1423 aa36.67■■■■□ 3.46
PLXNB1-206ENST00000462738 WDR97A6NE52 1622 aa36.66■■■■□ 3.46
PLXNB1-206ENST00000462738 CHD1O14646 1710 aa36.56■■■■□ 3.44
PLXNB1-206ENST00000462738 TDRD9Q8NDG6 1382 aaKnown RBP36.53■■■■□ 3.44
PLXNB1-206ENST00000462738 RIMBP3CA6NJZ7 1639 aa36.52■■■■□ 3.44
PLXNB1-206ENST00000462738 RIMBP3BA6NNM3 1639 aa36.52■■■■□ 3.44
PLXNB1-206ENST00000462738 RIMBP3Q9UFD9 1639 aa36.52■■■■□ 3.44
PLXNB1-206ENST00000462738 ARHGEF11O15085 1522 aa36.47■■■■□ 3.43
PLXNB1-206ENST00000462738 SNAPC4Q5SXM2 1469 aa36.43■■■■□ 3.42
PLXNB1-206ENST00000462738 MAGI1Q96QZ7 1491 aaPredicted RBP36.39■■■■□ 3.42
PLXNB1-206ENST00000462738 GRIN2BQ13224 1484 aa36.38■■■■□ 3.41
PLXNB1-206ENST00000462738 FBLN2P98095 1184 aa36.34■■■■□ 3.41
PLXNB1-206ENST00000462738 ABCA10Q8WWZ4 1543 aa36.33■■■■□ 3.41
PLXNB1-206ENST00000462738 ABCA5Q8WWZ7 1642 aa36.28■■■■□ 3.4
PLXNB1-206ENST00000462738 PBRM1Q86U86 1689 aa36.27■■■■□ 3.4
PLXNB1-206ENST00000462738 GAPVD1Q14C86 1478 aa36.27■■■■□ 3.4
PLXNB1-206ENST00000462738 BIVM-ERCC5R4GMW8 1640 aa36.25■■■■□ 3.39
PLXNB1-206ENST00000462738 SYNJ2O15056 1496 aa36.24■■■■□ 3.39
PLXNB1-206ENST00000462738 TOP2BQ02880 1626 aa36.24■■■■□ 3.39
PLXNB1-206ENST00000462738 CLASP1Q7Z460 1538 aa36.22■■■■□ 3.39
PLXNB1-206ENST00000462738 WRNQ14191 1432 aaPredicted RBP eCLIP36.21■■■■□ 3.39
PLXNB1-206ENST00000462738 SYNJ1O43426 1573 aa36.19■■■■□ 3.38
PLXNB1-206ENST00000462738 CHMP7Q8WUX9 453 aaPredicted RBP36.17■■■■□ 3.38
PLXNB1-206ENST00000462738 ARAP1Q96P48 1450 aa36.12■■■■□ 3.37
PLXNB1-206ENST00000462738 CYB5RLQ6IPT4 315 aa36.02■■■■□ 3.36
PLXNB1-206ENST00000462738 ADAMTS12P58397 1594 aa35.99■■■■□ 3.35
PLXNB1-206ENST00000462738 GRIN2AQ12879 1464 aa35.93■■■■□ 3.34
PLXNB1-206ENST00000462738 ERICH3Q5RHP9 1530 aa35.89■■■■□ 3.34
PLXNB1-206ENST00000462738 FHAD1B1AJZ9 1412 aa35.83■■■■□ 3.33
PLXNB1-206ENST00000462738 NUP160Q12769 1436 aa35.82■■■■□ 3.32
PLXNB1-206ENST00000462738 CEP170Q5SW79 1584 aa35.78■■■■□ 3.32
PLXNB1-206ENST00000462738 SHROOM2Q13796 1616 aa35.65■■■■□ 3.3
PLXNB1-206ENST00000462738 ERCC6L2Q5T890 1561 aa35.59■■■■□ 3.29
PLXNB1-206ENST00000462738 TRHP20396 242 aaPredicted RBP35.51■■■■□ 3.28
PLXNB1-206ENST00000462738 KIF27Q86VH2 1401 aa35.5■■■■□ 3.27
PLXNB1-206ENST00000462738 RUSC2Q8N2Y8 1516 aa35.49■■■■□ 3.27
PLXNB1-206ENST00000462738 CUL7Q14999 1698 aa35.44■■■■□ 3.26
PLXNB1-206ENST00000462738 IGF1RP08069 1367 aa35.4■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms