Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-4A0A1B0GX49 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC15.35■□□□□ 0.05
TRBV6-4A0A1B0GX49 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-4A0A1B0GX49 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-4A0A1B0GX49 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-4A0A1B0GX49 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-4A0A1B0GX49 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-4A0A1B0GX49 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRBV6-4A0A1B0GX49 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC15.35■□□□□ 0.05
TRBV6-4A0A1B0GX49 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC15.35■□□□□ 0.05
TRBV6-4A0A1B0GX49 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC15.35■□□□□ 0.05
TRBV6-4A0A1B0GX49 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC15.35■□□□□ 0.05
TRBV6-4A0A1B0GX49 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC15.35■□□□□ 0.05
TRBV6-4A0A1B0GX49 TRIR-202ENST00000588213 841 ntTSL 3 BASIC15.35■□□□□ 0.05
TRBV6-4A0A1B0GX49 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-4A0A1B0GX49 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC15.35■□□□□ 0.05
TRBV6-4A0A1B0GX49 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-4A0A1B0GX49 AC087239.1-201ENST00000622671 572 ntBASIC15.35■□□□□ 0.05
TRBV6-4A0A1B0GX49 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-4A0A1B0GX49 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-4A0A1B0GX49 USP45-205ENST00000472914 1617 ntTSL 5 BASIC15.35■□□□□ 0.05
TRBV6-4A0A1B0GX49 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-4A0A1B0GX49 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-4A0A1B0GX49 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-4A0A1B0GX49 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-4A0A1B0GX49 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-4A0A1B0GX49 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC15.34■□□□□ 0.05
TRBV6-4A0A1B0GX49 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-4A0A1B0GX49 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC15.34■□□□□ 0.05
TRBV6-4A0A1B0GX49 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-4A0A1B0GX49 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-4A0A1B0GX49 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-4A0A1B0GX49 PTCHD3P2-201ENST00000424937 1205 ntBASIC15.34■□□□□ 0.05
TRBV6-4A0A1B0GX49 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRBV6-4A0A1B0GX49 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-4A0A1B0GX49 RBM38-205ENST00000440234 686 ntTSL 2 BASIC15.34■□□□□ 0.05
TRBV6-4A0A1B0GX49 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC15.34■□□□□ 0.05
TRBV6-4A0A1B0GX49 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC15.34■□□□□ 0.05
TRBV6-4A0A1B0GX49 SF1-220ENST00000626028 704 ntTSL 2 BASIC15.34■□□□□ 0.05
TRBV6-4A0A1B0GX49 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC15.34■□□□□ 0.05
TRBV6-4A0A1B0GX49 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC15.34■□□□□ 0.05
TRBV6-4A0A1B0GX49 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-4A0A1B0GX49 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-4A0A1B0GX49 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-4A0A1B0GX49 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRBV6-4A0A1B0GX49 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-4A0A1B0GX49 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC15.34■□□□□ 0.05
TRBV6-4A0A1B0GX49 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC15.34■□□□□ 0.05
TRBV6-4A0A1B0GX49 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC15.34■□□□□ 0.05
TRBV6-4A0A1B0GX49 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
TRBV6-4A0A1B0GX49 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRBV6-4A0A1B0GX49 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRBV6-4A0A1B0GX49 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRBV6-4A0A1B0GX49 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRBV6-4A0A1B0GX49 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRBV6-4A0A1B0GX49 BID-212ENST00000614949 1988 ntTSL 5 BASIC15.33■□□□□ 0.05
TRBV6-4A0A1B0GX49 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-4A0A1B0GX49 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-4A0A1B0GX49 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-4A0A1B0GX49 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-4A0A1B0GX49 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-4A0A1B0GX49 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-4A0A1B0GX49 HES6-206ENST00000409574 738 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBV6-4A0A1B0GX49 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-4A0A1B0GX49 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-4A0A1B0GX49 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-4A0A1B0GX49 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC15.33■□□□□ 0.04
TRBV6-4A0A1B0GX49 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-4A0A1B0GX49 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC15.33■□□□□ 0.04
TRBV6-4A0A1B0GX49 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-4A0A1B0GX49 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-4A0A1B0GX49 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBV6-4A0A1B0GX49 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-4A0A1B0GX49 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRBV6-4A0A1B0GX49 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRBV6-4A0A1B0GX49 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-4A0A1B0GX49 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-4A0A1B0GX49 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-4A0A1B0GX49 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-4A0A1B0GX49 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-4A0A1B0GX49 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC15.32■□□□□ 0.04
TRBV6-4A0A1B0GX49 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-4A0A1B0GX49 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRBV6-4A0A1B0GX49 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRBV6-4A0A1B0GX49 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-4A0A1B0GX49 AC079089.2-201ENST00000531211 1277 ntBASIC15.32■□□□□ 0.04
TRBV6-4A0A1B0GX49 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-4A0A1B0GX49 MIR4466-201ENST00000606121 54 ntBASIC15.32■□□□□ 0.04
TRBV6-4A0A1B0GX49 AC011298.3-201ENST00000615796 283 ntBASIC15.32■□□□□ 0.04
TRBV6-4A0A1B0GX49 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRBV6-4A0A1B0GX49 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-4A0A1B0GX49 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC15.32■□□□□ 0.04
TRBV6-4A0A1B0GX49 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-4A0A1B0GX49 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-4A0A1B0GX49 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-4A0A1B0GX49 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
TRBV6-4A0A1B0GX49 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-4A0A1B0GX49 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TRBV6-4A0A1B0GX49 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TRBV6-4A0A1B0GX49 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms