Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KPNA4O00629 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KPNA4O00629 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
KPNA4O00629 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.29■□□□□ 0.84
KPNA4O00629 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.29■□□□□ 0.84
KPNA4O00629 KRT125P-201ENST00000546827 989 ntBASIC20.29■□□□□ 0.84
KPNA4O00629 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KPNA4O00629 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KPNA4O00629 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
KPNA4O00629 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.29■□□□□ 0.84
KPNA4O00629 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KPNA4O00629 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
KPNA4O00629 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KPNA4O00629 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
KPNA4O00629 AC144652.1-201ENST00000609974 1624 ntBASIC20.28■□□□□ 0.84
KPNA4O00629 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.28■□□□□ 0.84
KPNA4O00629 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KPNA4O00629 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.28■□□□□ 0.84
KPNA4O00629 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.28■□□□□ 0.84
KPNA4O00629 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.28■□□□□ 0.84
KPNA4O00629 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KPNA4O00629 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.28■□□□□ 0.84
KPNA4O00629 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
KPNA4O00629 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
KPNA4O00629 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.27■□□□□ 0.84
KPNA4O00629 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KPNA4O00629 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KPNA4O00629 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KPNA4O00629 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
KPNA4O00629 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
KPNA4O00629 MIR6722-201ENST00000617286 78 ntBASIC20.27■□□□□ 0.84
KPNA4O00629 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
KPNA4O00629 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KPNA4O00629 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KPNA4O00629 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.27■□□□□ 0.83
KPNA4O00629 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KPNA4O00629 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
KPNA4O00629 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KPNA4O00629 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.27■□□□□ 0.83
KPNA4O00629 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.26■□□□□ 0.83
KPNA4O00629 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KPNA4O00629 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KPNA4O00629 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KPNA4O00629 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KPNA4O00629 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
KPNA4O00629 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
KPNA4O00629 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KPNA4O00629 AC092028.1-203ENST00000608262 953 ntBASIC20.26■□□□□ 0.83
KPNA4O00629 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
KPNA4O00629 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
KPNA4O00629 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KPNA4O00629 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KPNA4O00629 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.26■□□□□ 0.83
KPNA4O00629 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.26■□□□□ 0.83
KPNA4O00629 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
KPNA4O00629 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KPNA4O00629 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KPNA4O00629 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.25■□□□□ 0.83
KPNA4O00629 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.25■□□□□ 0.83
KPNA4O00629 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KPNA4O00629 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.25■□□□□ 0.83
KPNA4O00629 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KPNA4O00629 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KPNA4O00629 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.25■□□□□ 0.83
KPNA4O00629 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.25■□□□□ 0.83
KPNA4O00629 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.25■□□□□ 0.83
KPNA4O00629 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KPNA4O00629 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.25■□□□□ 0.83
KPNA4O00629 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KPNA4O00629 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KPNA4O00629 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
KPNA4O00629 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KPNA4O00629 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.25■□□□□ 0.83
KPNA4O00629 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KPNA4O00629 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
KPNA4O00629 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KPNA4O00629 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KPNA4O00629 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
KPNA4O00629 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KPNA4O00629 MTDHP2-201ENST00000601468 714 ntBASIC20.24■□□□□ 0.83
KPNA4O00629 MIR4787-201ENST00000607364 84 ntBASIC20.24■□□□□ 0.83
KPNA4O00629 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.24■□□□□ 0.83
KPNA4O00629 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.24■□□□□ 0.83
KPNA4O00629 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KPNA4O00629 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KPNA4O00629 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
KPNA4O00629 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.23■□□□□ 0.83
KPNA4O00629 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KPNA4O00629 TSPY9P-201ENST00000440215 945 ntBASIC20.23■□□□□ 0.83
KPNA4O00629 TSPY11P-201ENST00000442607 1045 ntBASIC20.23■□□□□ 0.83
KPNA4O00629 AC239859.2-201ENST00000444165 318 ntBASIC20.23■□□□□ 0.83
KPNA4O00629 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.23■□□□□ 0.83
KPNA4O00629 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KPNA4O00629 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
KPNA4O00629 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
KPNA4O00629 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KPNA4O00629 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
KPNA4O00629 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
KPNA4O00629 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
KPNA4O00629 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms