RNA–Protein interactions for RNA: ENST00000414069.2

SPRN-201, Transcript of shadow of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRN, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRN-201ENST00000414069 NISCHQ9Y2I1 1504 aa43.19■■■■■ 4.5
SPRN-201ENST00000414069 SHROOM4Q9ULL8 1493 aa37.59■■■■□ 3.61
SPRN-201ENST00000414069 DCAF8L2P0C7V8 631 aa37.1■■■■□ 3.53
SPRN-201ENST00000414069 SUPT5HO00267 1087 aaKnown RBP36.72■■■■□ 3.47
SPRN-201ENST00000414069 CCDC180Q9P1Z9 1646 aa36.41■■■■□ 3.42
SPRN-201ENST00000414069 ZCCHC6Q5VYS8 1495 aaKnown RBP36.38■■■■□ 3.41
SPRN-201ENST00000414069 CHIC1Q5VXU3 224 aa35.11■■■■□ 3.21
SPRN-201ENST00000414069 DCAF1Q9Y4B6 1507 aa34.98■■■■□ 3.19
SPRN-201ENST00000414069 ABCC9O60706 1549 aa34.96■■■■□ 3.19
SPRN-201ENST00000414069 MYO15BQ96JP2 1530 aa34.87■■■■□ 3.17
SPRN-201ENST00000414069 SCRIBQ14160 1630 aa34.81■■■■□ 3.16
SPRN-201ENST00000414069 LOC105371045A0A1W2PR82 267 aa34.45■■■■□ 3.11
SPRN-201ENST00000414069 RSF1Q96T23 1441 aaPredicted RBP34.25■■■■□ 3.07
SPRN-201ENST00000414069 EHMT2Q96KQ7 1210 aa34.21■■■■□ 3.07
SPRN-201ENST00000414069 FAM9AQ8IZU1 332 aaPredicted RBP34.11■■■■□ 3.05
SPRN-201ENST00000414069 PCGF6Q9BYE7 350 aa34.08■■■■□ 3.05
SPRN-201ENST00000414069 CECR2Q9BXF3 1484 aa34.07■■■■□ 3.04
SPRN-201ENST00000414069 TRIM41Q8WV44 630 aa33.94■■■■□ 3.02
SPRN-201ENST00000414069 NACADO15069 1562 aa33.94■■■■□ 3.02
SPRN-201ENST00000414069 RB1CC1Q8TDY2 1594 aa33.88■■■■□ 3.01
SPRN-201ENST00000414069 MROH2BQ7Z745 1585 aa33.77■■■■□ 3
SPRN-201ENST00000414069 HRCP23327 699 aa33.68■■■□□ 2.98
SPRN-201ENST00000414069 PABPN1Q86U42 306 aaKnown RBP eCLIP33.67■■■□□ 2.98
SPRN-201ENST00000414069 WIZO95785 1651 aa33.56■■■□□ 2.96
SPRN-201ENST00000414069 PPARGC1BQ86YN6 1023 aaKnown RBP33.52■■■□□ 2.96
SPRN-201ENST00000414069 BAZ1AQ9NRL2 1556 aaPredicted RBP33.13■■■□□ 2.89
SPRN-201ENST00000414069 PELP1Q8IZL8 1130 aaKnown RBP33.12■■■□□ 2.89
SPRN-201ENST00000414069 TRIM26Q12899 539 aaPredicted RBP33.07■■■□□ 2.88
SPRN-201ENST00000414069 UNC13AQ9UPW8 1703 aa33.03■■■□□ 2.88
SPRN-201ENST00000414069 TTBK1Q5TCY1 1321 aaPredicted RBP32.94■■■□□ 2.86
SPRN-201ENST00000414069 SMARCA4P51532 1647 aa32.92■■■□□ 2.86
SPRN-201ENST00000414069 ABCC8Q09428 1581 aa32.91■■■□□ 2.86
SPRN-201ENST00000414069 CCDC88BA6NC98 1476 aa32.89■■■□□ 2.86
SPRN-201ENST00000414069 TOP2AP11388 1531 aaKnown RBP32.76■■■□□ 2.83
SPRN-201ENST00000414069 BICRAQ9NZM4 1560 aa32.72■■■□□ 2.83
SPRN-201ENST00000414069 SMARCA2P51531 1590 aa32.67■■■□□ 2.82
SPRN-201ENST00000414069 SOGA1O94964 1423 aa32.58■■■□□ 2.81
SPRN-201ENST00000414069 EIF4G1Q04637 1599 aaKnown RBP32.55■■■□□ 2.8
SPRN-201ENST00000414069 UBTFP17480 764 aaKnown RBP32.52■■■□□ 2.8
SPRN-201ENST00000414069 RUSC2Q8N2Y8 1516 aa32.47■■■□□ 2.79
SPRN-201ENST00000414069 RANGAP1P46060 587 aaPredicted RBP32.46■■■□□ 2.79
SPRN-201ENST00000414069 SCAF1Q9H7N4 1312 aaKnown RBP32.43■■■□□ 2.78
SPRN-201ENST00000414069 CSRNP3Q8WYN3 585 aa32.34■■■□□ 2.77
SPRN-201ENST00000414069 ATAD2BQ9ULI0 1458 aa32.28■■■□□ 2.76
SPRN-201ENST00000414069 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.26■■■□□ 2.76
SPRN-201ENST00000414069 BAZ1BQ9UIG0 1483 aaKnown RBP32.26■■■□□ 2.75
SPRN-201ENST00000414069 WRNQ14191 1432 aaPredicted RBP eCLIP32.23■■■□□ 2.75
SPRN-201ENST00000414069 CEP162Q5TB80 1403 aa32.15■■■□□ 2.74
SPRN-201ENST00000414069 CCER1Q8TC90 406 aaPredicted RBP32.04■■■□□ 2.72
SPRN-201ENST00000414069 SYNJ1O43426 1573 aa32■■■□□ 2.71
SPRN-201ENST00000414069 PEG3Q9GZU2 1588 aa31.98■■■□□ 2.71
SPRN-201ENST00000414069 ZEB1P37275 1124 aaPredicted RBP31.96■■■□□ 2.71
SPRN-201ENST00000414069 TNIKQ9UKE5 1360 aa31.94■■■□□ 2.7
SPRN-201ENST00000414069 MYT1Q01538 1121 aa31.85■■■□□ 2.69
SPRN-201ENST00000414069 GOLGA3Q08378 1498 aa31.83■■■□□ 2.69
SPRN-201ENST00000414069 EEA1Q15075 1411 aa31.8■■■□□ 2.68
SPRN-201ENST00000414069 HNRNPUL2Q1KMD3 747 aaKnown RBP31.74■■■□□ 2.67
SPRN-201ENST00000414069 RAPGEF2Q9Y4G8 1499 aa31.7■■■□□ 2.66
SPRN-201ENST00000414069 CLIP1P30622 1438 aa31.64■■■□□ 2.66
SPRN-201ENST00000414069 CEP164Q9UPV0 1460 aa31.64■■■□□ 2.66
SPRN-201ENST00000414069 APLP2Q06481 763 aa31.6■■■□□ 2.65
SPRN-201ENST00000414069 NCAPD3P42695 1498 aa31.54■■■□□ 2.64
SPRN-201ENST00000414069 TOP2BQ02880 1626 aa31.42■■■□□ 2.62
SPRN-201ENST00000414069 CUX1P39880 1505 aa31.39■■■□□ 2.62
SPRN-201ENST00000414069 NEUROD1Q13562 356 aa31.37■■■□□ 2.61
SPRN-201ENST00000414069 KIF21BO75037 1637 aa31.36■■■□□ 2.61
SPRN-201ENST00000414069 HMGXB3Q12766 1538 aa31.35■■■□□ 2.61
SPRN-201ENST00000414069 GTF3C3Q9Y5Q9 886 aa31.33■■■□□ 2.61
SPRN-201ENST00000414069 VPS8Q8N3P4 1428 aa31.3■■■□□ 2.6
SPRN-201ENST00000414069 ACIN1Q9UKV3 1341 aaKnown RBP31.29■■■□□ 2.6
SPRN-201ENST00000414069 CFTRP13569 1480 aa31.28■■■□□ 2.6
SPRN-201ENST00000414069 KANK4Q5T7N3 995 aaPredicted RBP31.23■■■□□ 2.59
SPRN-201ENST00000414069 KIF27Q86VH2 1401 aa31.22■■■□□ 2.59
SPRN-201ENST00000414069 ITGAEP38570 1179 aa31.2■■■□□ 2.59
SPRN-201ENST00000414069 P3H3Q8IVL6 736 aa31.18■■■□□ 2.58
SPRN-201ENST00000414069 BIVM-ERCC5R4GMW8 1640 aa31.17■■■□□ 2.58
SPRN-201ENST00000414069 ATP1B4Q9UN42 357 aaPredicted RBP31.15■■■□□ 2.58
SPRN-201ENST00000414069 CADPSQ9ULU8 1353 aa31.15■■■□□ 2.58
SPRN-201ENST00000414069 CUX2O14529 1486 aa31.15■■■□□ 2.58
SPRN-201ENST00000414069 PRXQ9BXM0 1461 aa31.13■■■□□ 2.57
SPRN-201ENST00000414069 DNAJC5BQ9UF47 199 aa31.13■■■□□ 2.57
SPRN-201ENST00000414069 CC2D2AQ9P2K1 1620 aa31.11■■■□□ 2.57
SPRN-201ENST00000414069 DIEXFQ68CQ4 756 aaKnown RBP31.09■■■□□ 2.57
SPRN-201ENST00000414069 ARAP1Q96P48 1450 aa31.04■■■□□ 2.56
SPRN-201ENST00000414069 NESP48681 1621 aa31.01■■■□□ 2.56
SPRN-201ENST00000414069 IGF1RP08069 1367 aa30.97■■■□□ 2.55
SPRN-201ENST00000414069 FGD5Q6ZNL6 1462 aa30.97■■■□□ 2.55
SPRN-201ENST00000414069 ERICH3Q5RHP9 1530 aa30.9■■■□□ 2.54
SPRN-201ENST00000414069 CARMIL1Q5VZK9 1371 aa30.9■■■□□ 2.54
SPRN-201ENST00000414069 RAD54L2Q9Y4B4 1467 aa30.89■■■□□ 2.54
SPRN-201ENST00000414069 FANCD2Q9BXW9 1451 aa30.88■■■□□ 2.53
SPRN-201ENST00000414069 ARHGAP35Q9NRY4 1499 aa30.84■■■□□ 2.53
SPRN-201ENST00000414069 ZNF316A6NFI3 1004 aaPredicted RBP30.81■■■□□ 2.52
SPRN-201ENST00000414069 CENPBP07199 599 aaPredicted RBP30.81■■■□□ 2.52
SPRN-201ENST00000414069 YTHDC1Q96MU7 727 aaKnown RBP30.8■■■□□ 2.52
SPRN-201ENST00000414069 FAM50AQ14320 339 aaKnown RBP30.68■■■□□ 2.5
SPRN-201ENST00000414069 TDRD9Q8NDG6 1382 aaKnown RBP30.66■■■□□ 2.5
SPRN-201ENST00000414069 POLA1P09884 1462 aaPredicted RBP30.6■■■□□ 2.49
SPRN-201ENST00000414069 FHOD3Q2V2M9 1422 aa30.58■■■□□ 2.49
SPRN-201ENST00000414069 TOPBP1Q92547 1522 aa30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms