RNA–Protein interactions for RNA: ENST00000251203.13

PBX4-201, Transcript of PBX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PBX4, Length 1,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-201ENST00000251203 NISCHQ9Y2I1 1504 aa47.84■■■■■ 5.25
PBX4-201ENST00000251203 CCDC180Q9P1Z9 1646 aa41.96■■■■■ 4.31
PBX4-201ENST00000251203 ABCC9O60706 1549 aa40.71■■■■■ 4.11
PBX4-201ENST00000251203 ZCCHC6Q5VYS8 1495 aaKnown RBP40.2■■■■■ 4.03
PBX4-201ENST00000251203 DCAF1Q9Y4B6 1507 aa39.54■■■■□ 3.92
PBX4-201ENST00000251203 DCAF8L2P0C7V8 631 aa39.4■■■■□ 3.9
PBX4-201ENST00000251203 NACADO15069 1562 aa39.31■■■■□ 3.88
PBX4-201ENST00000251203 RB1CC1Q8TDY2 1594 aa39.28■■■■□ 3.88
PBX4-201ENST00000251203 MYO15BQ96JP2 1530 aa39.17■■■■□ 3.86
PBX4-201ENST00000251203 SHROOM4Q9ULL8 1493 aa39.03■■■■□ 3.84
PBX4-201ENST00000251203 UNC13AQ9UPW8 1703 aa38.54■■■■□ 3.76
PBX4-201ENST00000251203 SCRIBQ14160 1630 aa38.39■■■■□ 3.74
PBX4-201ENST00000251203 BICRAQ9NZM4 1560 aa38.15■■■■□ 3.7
PBX4-201ENST00000251203 PABPN1Q86U42 306 aaKnown RBP eCLIP38.08■■■■□ 3.69
PBX4-201ENST00000251203 SUPT5HO00267 1087 aaKnown RBP37.52■■■■□ 3.6
PBX4-201ENST00000251203 CECR2Q9BXF3 1484 aa37.18■■■■□ 3.54
PBX4-201ENST00000251203 RSF1Q96T23 1441 aaPredicted RBP37.11■■■■□ 3.53
PBX4-201ENST00000251203 EIF4G1Q04637 1599 aaKnown RBP37.09■■■■□ 3.53
PBX4-201ENST00000251203 DNAJC5BQ9UF47 199 aa37.01■■■■□ 3.51
PBX4-201ENST00000251203 MROH2BQ7Z745 1585 aa36.98■■■■□ 3.51
PBX4-201ENST00000251203 BAZ1AQ9NRL2 1556 aaPredicted RBP36.92■■■■□ 3.5
PBX4-201ENST00000251203 CC2D2AQ9P2K1 1620 aa36.85■■■■□ 3.49
PBX4-201ENST00000251203 SMARCA4P51532 1647 aa36.8■■■■□ 3.48
PBX4-201ENST00000251203 WIZO95785 1651 aa36.71■■■■□ 3.47
PBX4-201ENST00000251203 ATAD2BQ9ULI0 1458 aa36.37■■■■□ 3.41
PBX4-201ENST00000251203 SMARCA2P51531 1590 aa36.33■■■■□ 3.41
PBX4-201ENST00000251203 PEG3Q9GZU2 1588 aa36.33■■■■□ 3.41
PBX4-201ENST00000251203 TOP2AP11388 1531 aaKnown RBP36.29■■■■□ 3.4
PBX4-201ENST00000251203 NCAPD3P42695 1498 aa36.25■■■■□ 3.39
PBX4-201ENST00000251203 HMGXB3Q12766 1538 aa36.16■■■■□ 3.38
PBX4-201ENST00000251203 BAZ1BQ9UIG0 1483 aaKnown RBP36.1■■■■□ 3.37
PBX4-201ENST00000251203 CHIC1Q5VXU3 224 aa35.96■■■■□ 3.35
PBX4-201ENST00000251203 CCDC88BA6NC98 1476 aa35.91■■■■□ 3.34
PBX4-201ENST00000251203 NESP48681 1621 aa35.38■■■■□ 3.25
PBX4-201ENST00000251203 LAMC3Q9Y6N6 1575 aa35.27■■■■□ 3.24
PBX4-201ENST00000251203 TRIM41Q8WV44 630 aa35.26■■■■□ 3.23
PBX4-201ENST00000251203 CADPSQ9ULU8 1353 aa35.21■■■■□ 3.23
PBX4-201ENST00000251203 ABCC8Q09428 1581 aa35.19■■■■□ 3.22
PBX4-201ENST00000251203 CFTRP13569 1480 aa35.12■■■■□ 3.21
PBX4-201ENST00000251203 ERCC6Q03468 1493 aa35.02■■■■□ 3.2
PBX4-201ENST00000251203 KIF21AQ7Z4S6 1674 aa35■■■■□ 3.19
PBX4-201ENST00000251203 PRDM2Q13029 1718 aa34.98■■■■□ 3.19
PBX4-201ENST00000251203 PDS5BQ9NTI5 1447 aa34.96■■■■□ 3.19
PBX4-201ENST00000251203 WRNQ14191 1432 aaPredicted RBP eCLIP34.91■■■■□ 3.18
PBX4-201ENST00000251203 FANCD2Q9BXW9 1451 aa34.86■■■■□ 3.17
PBX4-201ENST00000251203 SYNJ1O43426 1573 aa34.84■■■■□ 3.17
PBX4-201ENST00000251203 CEP164Q9UPV0 1460 aa34.78■■■■□ 3.16
PBX4-201ENST00000251203 THOC2Q8NI27 1593 aaKnown RBP34.76■■■■□ 3.16
PBX4-201ENST00000251203 TOP2BQ02880 1626 aa34.67■■■■□ 3.14
PBX4-201ENST00000251203 BIVM-ERCC5R4GMW8 1640 aa34.66■■■■□ 3.14
PBX4-201ENST00000251203 FAM9AQ8IZU1 332 aaPredicted RBP34.64■■■■□ 3.14
PBX4-201ENST00000251203 MRC2Q9UBG0 1479 aa34.64■■■■□ 3.14
PBX4-201ENST00000251203 CUX1P39880 1505 aa34.59■■■■□ 3.13
PBX4-201ENST00000251203 LOC105371045A0A1W2PR82 267 aa34.58■■■■□ 3.13
PBX4-201ENST00000251203 WDR62O43379 1518 aa34.54■■■■□ 3.12
PBX4-201ENST00000251203 URB2Q14146 1524 aaKnown RBP34.52■■■■□ 3.12
PBX4-201ENST00000251203 SOGA1O94964 1423 aa34.51■■■■□ 3.11
PBX4-201ENST00000251203 CUX2O14529 1486 aa34.48■■■■□ 3.11
PBX4-201ENST00000251203 EEA1Q15075 1411 aa34.41■■■■□ 3.1
PBX4-201ENST00000251203 RUSC2Q8N2Y8 1516 aa34.41■■■■□ 3.1
PBX4-201ENST00000251203 TOPBP1Q92547 1522 aa34.36■■■■□ 3.09
PBX4-201ENST00000251203 DNMBPQ6XZF7 1577 aa34.35■■■■□ 3.09
PBX4-201ENST00000251203 CSRNP3Q8WYN3 585 aa34.21■■■■□ 3.07
PBX4-201ENST00000251203 FGD5Q6ZNL6 1462 aa34.18■■■■□ 3.06
PBX4-201ENST00000251203 EHMT2Q96KQ7 1210 aa34.16■■■■□ 3.06
PBX4-201ENST00000251203 POLA1P09884 1462 aaPredicted RBP34.11■■■■□ 3.05
PBX4-201ENST00000251203 KIF21BO75037 1637 aa34.03■■■■□ 3.04
PBX4-201ENST00000251203 HRCP23327 699 aa34.01■■■■□ 3.04
PBX4-201ENST00000251203 KIF27Q86VH2 1401 aa34.01■■■■□ 3.04
PBX4-201ENST00000251203 IFT140Q96RY7 1462 aa34■■■■□ 3.03
PBX4-201ENST00000251203 TARBP1Q13395 1621 aaKnown RBP33.98■■■■□ 3.03
PBX4-201ENST00000251203 GOLGA3Q08378 1498 aa33.96■■■■□ 3.03
PBX4-201ENST00000251203 RAD54L2Q9Y4B4 1467 aa33.96■■■■□ 3.03
PBX4-201ENST00000251203 ZNF608Q9ULD9 1512 aaPredicted RBP33.9■■■■□ 3.02
PBX4-201ENST00000251203 ABCA10Q8WWZ4 1543 aa33.86■■■■□ 3.01
PBX4-201ENST00000251203 TNIKQ9UKE5 1360 aa33.84■■■■□ 3.01
PBX4-201ENST00000251203 WDR97A6NE52 1622 aa33.83■■■■□ 3.01
PBX4-201ENST00000251203 PRXQ9BXM0 1461 aa33.82■■■■□ 3.01
PBX4-201ENST00000251203 RAPGEF2Q9Y4G8 1499 aa33.81■■■■□ 3
PBX4-201ENST00000251203 EIF4G3O43432 1585 aaKnown RBP33.8■■■■□ 3
PBX4-201ENST00000251203 ERICH3Q5RHP9 1530 aa33.77■■■■□ 3
PBX4-201ENST00000251203 UBTFP17480 764 aaKnown RBP33.75■■■□□ 2.99
PBX4-201ENST00000251203 IGF1RP08069 1367 aa33.72■■■□□ 2.99
PBX4-201ENST00000251203 AQRO60306 1485 aaKnown RBP eCLIP33.72■■■□□ 2.999e-7■■■■□ 23
PBX4-201ENST00000251203 TDRD9Q8NDG6 1382 aaKnown RBP33.71■■■□□ 2.99
PBX4-201ENST00000251203 CEP162Q5TB80 1403 aa33.69■■■□□ 2.98
PBX4-201ENST00000251203 ABCA5Q8WWZ7 1642 aa33.64■■■□□ 2.98
PBX4-201ENST00000251203 PCGF6Q9BYE7 350 aa33.6■■■□□ 2.97
PBX4-201ENST00000251203 GAPVD1Q14C86 1478 aa33.55■■■□□ 2.96
PBX4-201ENST00000251203 CARMIL1Q5VZK9 1371 aa33.54■■■□□ 2.96
PBX4-201ENST00000251203 PBRM1Q86U86 1689 aa33.54■■■□□ 2.96
PBX4-201ENST00000251203 CUL7Q14999 1698 aa33.5■■■□□ 2.95
PBX4-201ENST00000251203 GRIN2BQ13224 1484 aa33.47■■■□□ 2.95
PBX4-201ENST00000251203 SNAPC4Q5SXM2 1469 aa33.43■■■□□ 2.94
PBX4-201ENST00000251203 CLIP1P30622 1438 aa33.41■■■□□ 2.94
PBX4-201ENST00000251203 MAGI1Q96QZ7 1491 aaPredicted RBP33.35■■■□□ 2.93
PBX4-201ENST00000251203 TRIM26Q12899 539 aaPredicted RBP33.34■■■□□ 2.93
PBX4-201ENST00000251203 CHD1O14646 1710 aa33.33■■■□□ 2.93
PBX4-201ENST00000251203 ADAMTS12P58397 1594 aa33.27■■■□□ 2.92
PBX4-201ENST00000251203 SYNJ2O15056 1496 aa33.23■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms