Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.25■□□□□ 0.99
TAF4O00268 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.25■□□□□ 0.99
TAF4O00268 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TAF4O00268 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.24■□□□□ 0.99
TAF4O00268 MIR663A-201ENST00000385250 93 ntBASIC21.24■□□□□ 0.99
TAF4O00268 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TAF4O00268 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
TAF4O00268 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TAF4O00268 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TAF4O00268 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TAF4O00268 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.24■□□□□ 0.99
TAF4O00268 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TAF4O00268 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TAF4O00268 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TAF4O00268 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TAF4O00268 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.23■□□□□ 0.99
TAF4O00268 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TAF4O00268 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.23■□□□□ 0.99
TAF4O00268 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.23■□□□□ 0.99
TAF4O00268 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.23■□□□□ 0.99
TAF4O00268 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.23■□□□□ 0.99
TAF4O00268 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TAF4O00268 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.22■□□□□ 0.99
TAF4O00268 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.22■□□□□ 0.99
TAF4O00268 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TAF4O00268 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.22■□□□□ 0.99
TAF4O00268 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.22■□□□□ 0.99
TAF4O00268 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.22■□□□□ 0.99
TAF4O00268 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TAF4O00268 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
TAF4O00268 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.22■□□□□ 0.99
TAF4O00268 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.21■□□□□ 0.99
TAF4O00268 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TAF4O00268 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TAF4O00268 AP004607.4-201ENST00000530158 1459 ntBASIC21.21■□□□□ 0.99
TAF4O00268 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
TAF4O00268 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TAF4O00268 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TAF4O00268 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TAF4O00268 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TAF4O00268 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TAF4O00268 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.21■□□□□ 0.99
TAF4O00268 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TAF4O00268 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.21■□□□□ 0.99
TAF4O00268 AC008687.6-201ENST00000596318 630 ntBASIC21.21■□□□□ 0.99
TAF4O00268 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TAF4O00268 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TAF4O00268 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.21■□□□□ 0.99
TAF4O00268 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
TAF4O00268 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.21■□□□□ 0.99
TAF4O00268 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TAF4O00268 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
TAF4O00268 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.2■□□□□ 0.99
TAF4O00268 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TAF4O00268 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
TAF4O00268 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TAF4O00268 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TAF4O00268 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
TAF4O00268 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.2■□□□□ 0.98
TAF4O00268 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TAF4O00268 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.2■□□□□ 0.98
TAF4O00268 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.2■□□□□ 0.98
TAF4O00268 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
TAF4O00268 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
TAF4O00268 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TAF4O00268 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TAF4O00268 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TAF4O00268 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TAF4O00268 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
TAF4O00268 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TAF4O00268 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TAF4O00268 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TAF4O00268 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TAF4O00268 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.19■□□□□ 0.98
TAF4O00268 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TAF4O00268 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.19■□□□□ 0.98
TAF4O00268 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
TAF4O00268 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.19■□□□□ 0.98
TAF4O00268 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.19■□□□□ 0.98
TAF4O00268 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.19■□□□□ 0.98
TAF4O00268 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TAF4O00268 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.19■□□□□ 0.98
TAF4O00268 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TAF4O00268 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TAF4O00268 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TAF4O00268 AP003733.4-201ENST00000623785 1697 ntBASIC21.18■□□□□ 0.98
TAF4O00268 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TAF4O00268 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TAF4O00268 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TAF4O00268 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.18■□□□□ 0.98
TAF4O00268 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.18■□□□□ 0.98
TAF4O00268 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TAF4O00268 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TAF4O00268 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.18■□□□□ 0.98
TAF4O00268 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TAF4O00268 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.18■□□□□ 0.98
TAF4O00268 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TAF4O00268 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TAF4O00268 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TAF4O00268 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms