Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
CHKB-CPT1BH3BT56 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
CHKB-CPT1BH3BT56 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CHKB-CPT1BH3BT56 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CHKB-CPT1BH3BT56 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CHKB-CPT1BH3BT56 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHKB-CPT1BH3BT56 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CHKB-CPT1BH3BT56 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHKB-CPT1BH3BT56 AC020763.4-201ENST00000623414 4170 ntBASIC12.29□□□□□ -0.44
CHKB-CPT1BH3BT56 NFE2L3P1-201ENST00000588207 1959 ntBASIC12.29□□□□□ -0.44
CHKB-CPT1BH3BT56 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHKB-CPT1BH3BT56 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHKB-CPT1BH3BT56 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHKB-CPT1BH3BT56 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
CHKB-CPT1BH3BT56 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHKB-CPT1BH3BT56 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC12.28□□□□□ -0.44
CHKB-CPT1BH3BT56 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHKB-CPT1BH3BT56 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHKB-CPT1BH3BT56 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHKB-CPT1BH3BT56 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHKB-CPT1BH3BT56 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHKB-CPT1BH3BT56 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHKB-CPT1BH3BT56 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CHKB-CPT1BH3BT56 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CHKB-CPT1BH3BT56 AL158211.5-201ENST00000623583 2518 ntBASIC12.28□□□□□ -0.44
CHKB-CPT1BH3BT56 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC12.28□□□□□ -0.44
CHKB-CPT1BH3BT56 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHKB-CPT1BH3BT56 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC12.28□□□□□ -0.44
CHKB-CPT1BH3BT56 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHKB-CPT1BH3BT56 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC12.28□□□□□ -0.44
CHKB-CPT1BH3BT56 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHKB-CPT1BH3BT56 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHKB-CPT1BH3BT56 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHKB-CPT1BH3BT56 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHKB-CPT1BH3BT56 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CHKB-CPT1BH3BT56 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CHKB-CPT1BH3BT56 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
CHKB-CPT1BH3BT56 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CHKB-CPT1BH3BT56 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CHKB-CPT1BH3BT56 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CHKB-CPT1BH3BT56 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
CHKB-CPT1BH3BT56 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC12.27□□□□□ -0.44
CHKB-CPT1BH3BT56 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
CHKB-CPT1BH3BT56 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC12.27□□□□□ -0.45
CHKB-CPT1BH3BT56 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CHKB-CPT1BH3BT56 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CHKB-CPT1BH3BT56 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CHKB-CPT1BH3BT56 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CHKB-CPT1BH3BT56 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
CHKB-CPT1BH3BT56 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CHKB-CPT1BH3BT56 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CHKB-CPT1BH3BT56 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CHKB-CPT1BH3BT56 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC12.27□□□□□ -0.45
CHKB-CPT1BH3BT56 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CHKB-CPT1BH3BT56 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CHKB-CPT1BH3BT56 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CHKB-CPT1BH3BT56 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CHKB-CPT1BH3BT56 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC12.26□□□□□ -0.45
CHKB-CPT1BH3BT56 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CHKB-CPT1BH3BT56 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CHKB-CPT1BH3BT56 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CHKB-CPT1BH3BT56 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CHKB-CPT1BH3BT56 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CHKB-CPT1BH3BT56 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CHKB-CPT1BH3BT56 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CHKB-CPT1BH3BT56 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CHKB-CPT1BH3BT56 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC12.26□□□□□ -0.45
CHKB-CPT1BH3BT56 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CHKB-CPT1BH3BT56 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CHKB-CPT1BH3BT56 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CHKB-CPT1BH3BT56 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC12.26□□□□□ -0.45
CHKB-CPT1BH3BT56 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC12.26□□□□□ -0.45
CHKB-CPT1BH3BT56 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CHKB-CPT1BH3BT56 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CHKB-CPT1BH3BT56 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CHKB-CPT1BH3BT56 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CHKB-CPT1BH3BT56 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CHKB-CPT1BH3BT56 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CHKB-CPT1BH3BT56 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CHKB-CPT1BH3BT56 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CHKB-CPT1BH3BT56 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CHKB-CPT1BH3BT56 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CHKB-CPT1BH3BT56 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
CHKB-CPT1BH3BT56 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CHKB-CPT1BH3BT56 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CHKB-CPT1BH3BT56 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
CHKB-CPT1BH3BT56 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CHKB-CPT1BH3BT56 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CHKB-CPT1BH3BT56 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC12.25□□□□□ -0.45
CHKB-CPT1BH3BT56 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CHKB-CPT1BH3BT56 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC12.25□□□□□ -0.45
CHKB-CPT1BH3BT56 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC12.25□□□□□ -0.45
CHKB-CPT1BH3BT56 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CHKB-CPT1BH3BT56 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CHKB-CPT1BH3BT56 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
CHKB-CPT1BH3BT56 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CHKB-CPT1BH3BT56 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CHKB-CPT1BH3BT56 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CHKB-CPT1BH3BT56 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CHKB-CPT1BH3BT56 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms