RNA–Protein interactions for RNA: ENST00000199448.8

EPDR1-201, Transcript of ependymin related 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EPDR1, Length 2,599 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPDR1-201ENST00000199448 NISCHQ9Y2I1 1504 aa41.53■■■■■ 4.24
EPDR1-201ENST00000199448 SHROOM4Q9ULL8 1493 aa36.22■■■■□ 3.39
EPDR1-201ENST00000199448 SUPT5HO00267 1087 aaKnown RBP35.66■■■■□ 3.3
EPDR1-201ENST00000199448 ZCCHC6Q5VYS8 1495 aaKnown RBP35.17■■■■□ 3.22
EPDR1-201ENST00000199448 DCAF8L2P0C7V8 631 aa34.88■■■■□ 3.17
EPDR1-201ENST00000199448 CCDC180Q9P1Z9 1646 aa34.82■■■■□ 3.16
EPDR1-201ENST00000199448 MYO15BQ96JP2 1530 aa34.73■■■■□ 3.15
EPDR1-201ENST00000199448 CHIC1Q5VXU3 224 aa34.67■■■■□ 3.14
EPDR1-201ENST00000199448 HRCP23327 699 aa34.19■■■■□ 3.06
EPDR1-201ENST00000199448 PCGF6Q9BYE7 350 aa34.13■■■■□ 3.05
EPDR1-201ENST00000199448 LOC105371045A0A1W2PR82 267 aa33.9■■■■□ 3.02
EPDR1-201ENST00000199448 DCAF1Q9Y4B6 1507 aa33.8■■■■□ 3
EPDR1-201ENST00000199448 PPARGC1BQ86YN6 1023 aaKnown RBP33.78■■■■□ 3
EPDR1-201ENST00000199448 ABCC9O60706 1549 aa33.23■■■□□ 2.91
EPDR1-201ENST00000199448 SCRIBQ14160 1630 aa33.16■■■□□ 2.9
EPDR1-201ENST00000199448 RSF1Q96T23 1441 aaPredicted RBP33.15■■■□□ 2.9
EPDR1-201ENST00000199448 TRIM26Q12899 539 aaPredicted RBP33.13■■■□□ 2.89
EPDR1-201ENST00000199448 FAM9AQ8IZU1 332 aaPredicted RBP33.02■■■□□ 2.88
EPDR1-201ENST00000199448 TRIM41Q8WV44 630 aa32.98■■■□□ 2.87
EPDR1-201ENST00000199448 EHMT2Q96KQ7 1210 aa32.95■■■□□ 2.87
EPDR1-201ENST00000199448 RB1CC1Q8TDY2 1594 aa32.88■■■□□ 2.85
EPDR1-201ENST00000199448 CECR2Q9BXF3 1484 aa32.64■■■□□ 2.81
EPDR1-201ENST00000199448 MROH2BQ7Z745 1585 aa32.47■■■□□ 2.79
EPDR1-201ENST00000199448 ZEB1P37275 1124 aaPredicted RBP32.35■■■□□ 2.77
EPDR1-201ENST00000199448 WIZO95785 1651 aa32.29■■■□□ 2.76
EPDR1-201ENST00000199448 NACADO15069 1562 aa32.21■■■□□ 2.75
EPDR1-201ENST00000199448 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.02■■■□□ 2.72
EPDR1-201ENST00000199448 TTBK1Q5TCY1 1321 aaPredicted RBP31.93■■■□□ 2.7
EPDR1-201ENST00000199448 BAZ1AQ9NRL2 1556 aaPredicted RBP31.91■■■□□ 2.7
EPDR1-201ENST00000199448 SCAF1Q9H7N4 1312 aaKnown RBP31.89■■■□□ 2.7
EPDR1-201ENST00000199448 EIF4G1Q04637 1599 aaKnown RBP31.86■■■□□ 2.69
EPDR1-201ENST00000199448 ABCC8Q09428 1581 aa31.82■■■□□ 2.68
EPDR1-201ENST00000199448 CCER1Q8TC90 406 aaPredicted RBP31.8■■■□□ 2.68
EPDR1-201ENST00000199448 CCDC88BA6NC98 1476 aa31.78■■■□□ 2.68
EPDR1-201ENST00000199448 SOGA1O94964 1423 aa31.64■■■□□ 2.66
EPDR1-201ENST00000199448 TOP2AP11388 1531 aaKnown RBP31.59■■■□□ 2.65
EPDR1-201ENST00000199448 CEP162Q5TB80 1403 aa31.53■■■□□ 2.64
EPDR1-201ENST00000199448 SMARCA4P51532 1647 aa31.53■■■□□ 2.64
EPDR1-201ENST00000199448 SMARCA2P51531 1590 aa31.53■■■□□ 2.64
EPDR1-201ENST00000199448 RUSC2Q8N2Y8 1516 aa31.51■■■□□ 2.64
EPDR1-201ENST00000199448 UBTFP17480 764 aaKnown RBP31.42■■■□□ 2.62
EPDR1-201ENST00000199448 WRNQ14191 1432 aaPredicted RBP eCLIP31.41■■■□□ 2.62
EPDR1-201ENST00000199448 NEUROD1Q13562 356 aa31.39■■■□□ 2.62
EPDR1-201ENST00000199448 CSRNP3Q8WYN3 585 aa31.38■■■□□ 2.61
EPDR1-201ENST00000199448 PABPN1Q86U42 306 aaKnown RBP eCLIP31.37■■■□□ 2.61
EPDR1-201ENST00000199448 DIEXFQ68CQ4 756 aaKnown RBP31.35■■■□□ 2.61
EPDR1-201ENST00000199448 TNIKQ9UKE5 1360 aa31.35■■■□□ 2.61
EPDR1-201ENST00000199448 ACIN1Q9UKV3 1341 aaKnown RBP31.31■■■□□ 2.6
EPDR1-201ENST00000199448 UNC13AQ9UPW8 1703 aa31.3■■■□□ 2.6
EPDR1-201ENST00000199448 PELP1Q8IZL8 1130 aaKnown RBP31.13■■■□□ 2.57
EPDR1-201ENST00000199448 EEA1Q15075 1411 aa31.09■■■□□ 2.57
EPDR1-201ENST00000199448 GTF3C3Q9Y5Q9 886 aa31.08■■■□□ 2.57
EPDR1-201ENST00000199448 GOLGA3Q08378 1498 aa31.07■■■□□ 2.56
EPDR1-201ENST00000199448 HNRNPUL2Q1KMD3 747 aaKnown RBP31.06■■■□□ 2.56
EPDR1-201ENST00000199448 RANGAP1P46060 587 aaPredicted RBP31.01■■■□□ 2.55
EPDR1-201ENST00000199448 BICRAQ9NZM4 1560 aa30.97■■■□□ 2.55
EPDR1-201ENST00000199448 SYNJ1O43426 1573 aa30.95■■■□□ 2.55
EPDR1-201ENST00000199448 ZNF316A6NFI3 1004 aaPredicted RBP30.95■■■□□ 2.55
EPDR1-201ENST00000199448 CENPBP07199 599 aaPredicted RBP30.92■■■□□ 2.54
EPDR1-201ENST00000199448 YTHDC1Q96MU7 727 aaKnown RBP30.87■■■□□ 2.53
EPDR1-201ENST00000199448 CLIP1P30622 1438 aa30.85■■■□□ 2.53
EPDR1-201ENST00000199448 CEP164Q9UPV0 1460 aa30.83■■■□□ 2.53
EPDR1-201ENST00000199448 RAPGEF2Q9Y4G8 1499 aa30.77■■■□□ 2.52
EPDR1-201ENST00000199448 PEG3Q9GZU2 1588 aa30.74■■■□□ 2.51
EPDR1-201ENST00000199448 MIER1Q8N108 512 aa30.74■■■□□ 2.51
EPDR1-201ENST00000199448 ATAD2BQ9ULI0 1458 aa30.71■■■□□ 2.51
EPDR1-201ENST00000199448 KIF21BO75037 1637 aa30.71■■■□□ 2.51
EPDR1-201ENST00000199448 VPS8Q8N3P4 1428 aa30.69■■■□□ 2.5
EPDR1-201ENST00000199448 APLP2Q06481 763 aa30.63■■■□□ 2.49
EPDR1-201ENST00000199448 BAZ1BQ9UIG0 1483 aaKnown RBP30.63■■■□□ 2.49
EPDR1-201ENST00000199448 KANK4Q5T7N3 995 aaPredicted RBP30.43■■■□□ 2.46
EPDR1-201ENST00000199448 TOP2BQ02880 1626 aa30.37■■■□□ 2.45
EPDR1-201ENST00000199448 ARAP1Q96P48 1450 aa30.31■■■□□ 2.44
EPDR1-201ENST00000199448 DHX57Q6P158 1386 aaKnown RBP30.29■■■□□ 2.44
EPDR1-201ENST00000199448 PRXQ9BXM0 1461 aa30.27■■■□□ 2.44
EPDR1-201ENST00000199448 BIVM-ERCC5R4GMW8 1640 aa30.18■■■□□ 2.42
EPDR1-201ENST00000199448 ITGAEP38570 1179 aa30.16■■■□□ 2.42
EPDR1-201ENST00000199448 CUX1P39880 1505 aa30.15■■■□□ 2.42
EPDR1-201ENST00000199448 ERICH3Q5RHP9 1530 aa30.13■■■□□ 2.41
EPDR1-201ENST00000199448 CLSPNQ9HAW4 1339 aa30.03■■■□□ 2.4
EPDR1-201ENST00000199448 KIF27Q86VH2 1401 aa30.03■■■□□ 2.4
EPDR1-201ENST00000199448 RRBP1Q9P2E9 1410 aaKnown RBP30.01■■■□□ 2.39
EPDR1-201ENST00000199448 ARHGAP35Q9NRY4 1499 aa29.99■■■□□ 2.39
EPDR1-201ENST00000199448 CCNB3Q8WWL7 1395 aa29.95■■■□□ 2.38
EPDR1-201ENST00000199448 NCAPD3P42695 1498 aa29.94■■■□□ 2.38
EPDR1-201ENST00000199448 CFTRP13569 1480 aa29.86■■■□□ 2.37
EPDR1-201ENST00000199448 KCNH8Q96L42 1107 aa29.86■■■□□ 2.37
EPDR1-201ENST00000199448 HMGXB3Q12766 1538 aa29.85■■■□□ 2.37
EPDR1-201ENST00000199448 RAB3GAP2Q9H2M9 1393 aa29.81■■■□□ 2.36
EPDR1-201ENST00000199448 SUPT16HQ9Y5B9 1047 aaKnown RBP29.8■■■□□ 2.36
EPDR1-201ENST00000199448 CUX2O14529 1486 aa29.8■■■□□ 2.36
EPDR1-201ENST00000199448 IGF1RP08069 1367 aa29.8■■■□□ 2.36
EPDR1-201ENST00000199448 P3H3Q8IVL6 736 aa29.75■■■□□ 2.35
EPDR1-201ENST00000199448 SIN3AQ96ST3 1273 aa29.7■■■□□ 2.35
EPDR1-201ENST00000199448 MAPKBP1O60336 1514 aa29.7■■■□□ 2.35
EPDR1-201ENST00000199448 PHLDB1Q86UU1 1377 aa29.66■■■□□ 2.34
EPDR1-201ENST00000199448 FAM50AQ14320 339 aaKnown RBP29.66■■■□□ 2.34
EPDR1-201ENST00000199448 ATP1B4Q9UN42 357 aaPredicted RBP29.66■■■□□ 2.34
EPDR1-201ENST00000199448 CARMIL1Q5VZK9 1371 aa29.65■■■□□ 2.34
EPDR1-201ENST00000199448 TIAM1Q13009 1591 aa29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms