Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 RBM8A-202ENST00000484825 542 ntTSL 513.71□□□□□ -0.212e-11■■□□□ 13.8
XRCC6P12956 RBM8A-209ENST00000634161 464 ntTSL 313.38□□□□□ -0.272e-11■■□□□ 13.8
XRCC6P12956 RBM8A-203ENST00000498663 764 ntTSL 213.21□□□□□ -0.292e-11■■□□□ 13.8
XRCC6P12956 TMEM74B-203ENST00000481747 582 ntTSL 231.56■■■□□ 2.642e-9■■□□□ 13.8
XRCC6P12956 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.342e-7■■□□□ 13.8
XRCC6P12956 SPPL2B-205ENST00000589515 1733 ntTSL 523.33■■□□□ 1.322e-7■■□□□ 13.8
XRCC6P12956 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.152e-7■■□□□ 13.8
XRCC6P12956 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC19.57■□□□□ 0.725e-9■■□□□ 13.8
XRCC6P12956 KMT5A-209ENST00000537270 352 ntTSL 519.22■□□□□ 0.672e-7■■□□□ 13.8
XRCC6P12956 CDK2-206ENST00000554619 1802 ntTSL 518.81■□□□□ 0.62e-7■■□□□ 13.8
XRCC6P12956 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.64■□□□□ 0.572e-7■■□□□ 13.8
XRCC6P12956 GIPR-207ENST00000591322 557 ntTSL 418.4■□□□□ 0.542e-9■■□□□ 13.8
XRCC6P12956 ABCA7-217ENST00000533574 587 ntTSL 418.16■□□□□ 0.52e-7■■□□□ 13.8
XRCC6P12956 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.462e-7■■□□□ 13.8
XRCC6P12956 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.78■□□□□ 0.282e-7■■□□□ 13.8
XRCC6P12956 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.282e-7■■□□□ 13.8
XRCC6P12956 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.272e-7■■□□□ 13.8
XRCC6P12956 CDK2-208ENST00000555408 2598 ntTSL 316.68■□□□□ 0.262e-7■■□□□ 13.8
XRCC6P12956 TUBA1B-201ENST00000332858 3198 ntTSL 1 (best)16.67■□□□□ 0.262e-7■■□□□ 13.8
XRCC6P12956 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.242e-7■■□□□ 13.8
XRCC6P12956 TUBA1B-204ENST00000547765 1875 ntTSL 516.44■□□□□ 0.222e-7■■□□□ 13.8
XRCC6P12956 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.172e-7■■□□□ 13.8
XRCC6P12956 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.172e-7■■□□□ 13.8
XRCC6P12956 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC15.37■□□□□ 0.052e-7■■□□□ 13.8
XRCC6P12956 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.042e-7■■□□□ 13.8
XRCC6P12956 KMT5A-204ENST00000437519 1774 ntTSL 214.69□□□□□ -0.062e-7■■□□□ 13.8
XRCC6P12956 CDK2-207ENST00000555357 1367 ntTSL 514.51□□□□□ -0.092e-7■■□□□ 13.8
XRCC6P12956 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC14.16□□□□□ -0.142e-7■■□□□ 13.8
XRCC6P12956 CDK2-211ENST00000556464 609 ntTSL 313.67□□□□□ -0.222e-7■■□□□ 13.8
XRCC6P12956 ZC3H11A-206ENST00000453771 1892 ntTSL 513.57□□□□□ -0.241e-9■■□□□ 13.8
XRCC6P12956 TBCD-201ENST00000355528 7168 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.315e-9■■□□□ 13.8
XRCC6P12956 KDM3A-205ENST00000441719 8741 ntTSL 212.01□□□□□ -0.492e-7■■□□□ 13.8
XRCC6P12956 KDM3A-202ENST00000409064 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.512e-7■■□□□ 13.8
XRCC6P12956 ZC3H11A-205ENST00000432282 682 ntTSL 510.37□□□□□ -0.751e-9■■□□□ 13.8
XRCC6P12956 ZC3H11A-208ENST00000466470 944 ntTSL 210.37□□□□□ -0.751e-9■■□□□ 13.8
XRCC6P12956 ZC3H11A-207ENST00000461980 822 ntTSL 28.92□□□□□ -0.981e-9■■□□□ 13.8
XRCC6P12956 RPS13-203ENST00000525828 664 ntTSL 219.14■□□□□ 0.654e-12■■□□□ 13.8
XRCC6P12956 RPS13-204ENST00000526895 561 ntTSL 316.12■□□□□ 0.174e-12■■□□□ 13.8
XRCC6P12956 RPS13-209ENST00000533969 355 ntTSL 315.28■□□□□ 0.044e-12■■□□□ 13.8
XRCC6P12956 RPS13-201ENST00000228140 491 ntTSL 2 BASIC11.66□□□□□ -0.544e-12■■□□□ 13.8
XRCC6P12956 RPS13-202ENST00000525634 646 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.764e-12■■□□□ 13.8
XRCC6P12956 GUK1-234ENST00000492871 1065 ntTSL 328.86■■■□□ 2.214e-7■■□□□ 13.8
XRCC6P12956 GUK1-235ENST00000493138 694 ntTSL 327.82■■■□□ 2.044e-7■■□□□ 13.8
XRCC6P12956 GUK1-208ENST00000366728 842 ntTSL 2 BASIC26.78■■□□□ 1.884e-7■■□□□ 13.8
XRCC6P12956 GUK1-220ENST00000471270 657 ntTSL 225.22■■□□□ 1.634e-7■■□□□ 13.8
XRCC6P12956 GUK1-205ENST00000366722 850 ntTSL 3 BASIC24.29■■□□□ 1.484e-7■■□□□ 13.8
XRCC6P12956 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.82■■□□□ 1.44e-7■■□□□ 13.8
XRCC6P12956 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC22.36■■□□□ 1.174e-7■■□□□ 13.8
XRCC6P12956 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.174e-7■■□□□ 13.8
XRCC6P12956 GUK1-230ENST00000485838 774 ntTSL 320.17■□□□□ 0.824e-7■■□□□ 13.8
XRCC6P12956 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.654e-7■■□□□ 13.8
XRCC6P12956 GUK1-222ENST00000477206 589 ntTSL 219.11■□□□□ 0.654e-7■■□□□ 13.8
XRCC6P12956 GUK1-219ENST00000470040 2548 ntTSL 219.09■□□□□ 0.654e-7■■□□□ 13.8
XRCC6P12956 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.03■□□□□ 0.644e-7■■□□□ 13.8
XRCC6P12956 GUK1-224ENST00000480056 544 ntTSL 318.7■□□□□ 0.584e-7■■□□□ 13.8
XRCC6P12956 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.454e-7■■□□□ 13.8
XRCC6P12956 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.93■□□□□ 0.34e-7■■□□□ 13.8
XRCC6P12956 GUK1-217ENST00000465025 783 ntTSL 216.63■□□□□ 0.254e-7■■□□□ 13.8
XRCC6P12956 GUK1-232ENST00000486668 738 ntTSL 314.23□□□□□ -0.134e-7■■□□□ 13.8
XRCC6P12956 GUK1-212ENST00000435153 865 ntTSL 313.67□□□□□ -0.224e-7■■□□□ 13.8
XRCC6P12956 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.755e-7■■□□□ 13.7
XRCC6P12956 SNRNP70-204ENST00000595231 1673 ntTSL 1 (best)25.21■■□□□ 1.635e-7■■□□□ 13.7
XRCC6P12956 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.12■■□□□ 1.615e-7■■□□□ 13.7
XRCC6P12956 SNRNP70-209ENST00000601065 1757 ntTSL 324.59■■□□□ 1.535e-7■■□□□ 13.7
XRCC6P12956 SNRNP70-202ENST00000401730 3144 ntTSL 221.23■□□□□ 0.995e-7■■□□□ 13.7
XRCC6P12956 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.951e-6■■□□□ 13.7
XRCC6P12956 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.621e-6■■□□□ 13.7
XRCC6P12956 ARID1A-204ENST00000430799 6521 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.431e-6■■□□□ 13.7
XRCC6P12956 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.112e-6■■□□□ 13.7
XRCC6P12956 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC29.65■■■□□ 2.342e-6■■□□□ 13.7
XRCC6P12956 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.912e-6■■□□□ 13.7
XRCC6P12956 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.39■■□□□ 1.822e-6■■□□□ 13.7
XRCC6P12956 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.64■■□□□ 1.692e-6■■□□□ 13.7
XRCC6P12956 TANGO2-215ENST00000450019 1689 ntTSL 525.23■■□□□ 1.632e-6■■□□□ 13.7
XRCC6P12956 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC25.18■■□□□ 1.622e-6■■□□□ 13.7
XRCC6P12956 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC24.3■■□□□ 1.482e-6■■□□□ 13.7
XRCC6P12956 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC23.98■■□□□ 1.432e-6■■□□□ 13.7
XRCC6P12956 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.89■■□□□ 1.412e-6■■□□□ 13.7
XRCC6P12956 TANGO2-203ENST00000399807 2241 ntTSL 518.97■□□□□ 0.632e-6■■□□□ 13.7
XRCC6P12956 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.28■□□□□ 0.362e-6■■□□□ 13.7
XRCC6P12956 TANGO2-213ENST00000444651 847 ntTSL 315.7■□□□□ 0.12e-6■■□□□ 13.7
XRCC6P12956 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.342e-6■■□□□ 13.7
XRCC6P12956 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.13■■■□□ 2.572e-6■■□□□ 13.6
XRCC6P12956 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC29.42■■■□□ 2.32e-6■■□□□ 13.6
XRCC6P12956 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC24.77■■□□□ 1.562e-6■■□□□ 13.6
XRCC6P12956 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.442e-6■■□□□ 13.6
XRCC6P12956 GRK2-207ENST00000529738 500 ntTSL 223.55■■□□□ 1.362e-6■■□□□ 13.6
XRCC6P12956 ARVCF-211ENST00000495096 2549 ntTSL 223.45■■□□□ 1.342e-6■■□□□ 13.6
XRCC6P12956 ADK-206ENST00000541550 2222 ntTSL 2 BASIC23.42■■□□□ 1.345e-6■■□□□ 13.6
XRCC6P12956 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.13■■□□□ 1.292e-6■■□□□ 13.6
XRCC6P12956 GABBR1-208ENST00000472823 4286 ntTSL 522.71■■□□□ 1.232e-6■■□□□ 13.6
XRCC6P12956 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC22.25■■□□□ 1.152e-6■■□□□ 13.6
XRCC6P12956 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.155e-6■■□□□ 13.6
XRCC6P12956 MAN2C1-236ENST00000567360 457 ntTSL 221.85■■□□□ 1.092e-6■■□□□ 13.6
XRCC6P12956 ZNF451-209ENST00000502749 790 ntTSL 521.56■■□□□ 1.042e-6■■□□□ 13.6
XRCC6P12956 ZNF451-216ENST00000510483 719 ntTSL 421.29■■□□□ 12e-6■■□□□ 13.6
XRCC6P12956 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 12e-6■■□□□ 13.6
XRCC6P12956 UNC45A-211ENST00000554481 553 ntTSL 421.22■□□□□ 0.992e-6■■□□□ 13.6
XRCC6P12956 AC010522.1-201ENST00000597134 540 ntTSL 320.77■□□□□ 0.922e-6■■□□□ 13.6
XRCC6P12956 GABBR1-220ENST00000494877 2364 ntTSL 520.58■□□□□ 0.882e-6■■□□□ 13.6
Retrieved 100 of 6,788 protein–RNA pairs in 49.9 ms