RNA–Protein interactions for RNA: ENST00000466470.5

ZC3H11A-208, Transcript of zinc finger CCCH-type containing 11A, humanhuman

TSL 2

Gene ZC3H11A, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H11A-208ENST00000466470 AEBP2Q6ZN18 517 aaPredicted RBP27.89■■■□□ 2.06
ZC3H11A-208ENST00000466470 CHIC1Q5VXU3 224 aa26.69■■□□□ 1.86
ZC3H11A-208ENST00000466470 SENP3Q9H4L4 574 aaPredicted RBP23.71■■□□□ 1.39
ZC3H11A-208ENST00000466470 PHF23Q9BUL5 403 aaPredicted RBP23.42■■□□□ 1.34
ZC3H11A-208ENST00000466470 NISCHQ9Y2I1 1504 aa22.58■■□□□ 1.21
ZC3H11A-208ENST00000466470 FOXD1Q16676 465 aa22.09■■□□□ 1.13
ZC3H11A-208ENST00000466470 PLPPR3Q6T4P5 718 aa21.44■■□□□ 1.02
ZC3H11A-208ENST00000466470 PPP6R1Q9UPN7 881 aa20.82■□□□□ 0.92
ZC3H11A-208ENST00000466470 ADRA2BP18089 450 aa20.73■□□□□ 0.91
ZC3H11A-208ENST00000466470 PIAS4Q8N2W9 510 aaPredicted RBP20.65■□□□□ 0.9
ZC3H11A-208ENST00000466470 MSH5O43196 834 aa20.56■□□□□ 0.88
ZC3H11A-208ENST00000466470 CCDC180Q9P1Z9 1646 aa20.02■□□□□ 0.8
ZC3H11A-208ENST00000466470 ABCC9O60706 1549 aa19.86■□□□□ 0.77
ZC3H11A-208ENST00000466470 POTEDQ86YR6 584 aa19.71■□□□□ 0.75
ZC3H11A-208ENST00000466470 DCAF8L2P0C7V8 631 aa19.15■□□□□ 0.66
ZC3H11A-208ENST00000466470 MAPK8IP2Q13387 824 aaPredicted RBP18.97■□□□□ 0.63
ZC3H11A-208ENST00000466470 RB1CC1Q8TDY2 1594 aa18.96■□□□□ 0.63
ZC3H11A-208ENST00000466470 SCAF1Q9H7N4 1312 aaKnown RBP18.93■□□□□ 0.62
ZC3H11A-208ENST00000466470 NACADO15069 1562 aa18.89■□□□□ 0.62
ZC3H11A-208ENST00000466470 DMRT2Q9Y5R5 561 aa18.87■□□□□ 0.61
ZC3H11A-208ENST00000466470 PPP4R3CPQ6ZMV5 832 aa18.82■□□□□ 0.6
ZC3H11A-208ENST00000466470 ZCCHC6Q5VYS8 1495 aaKnown RBP18.78■□□□□ 0.6
ZC3H11A-208ENST00000466470 MYO15BQ96JP2 1530 aa18.68■□□□□ 0.58
ZC3H11A-208ENST00000466470 PABPN1Q86U42 306 aaKnown RBP eCLIP18.61■□□□□ 0.57
ZC3H11A-208ENST00000466470 DCAF1Q9Y4B6 1507 aa18.59■□□□□ 0.57
ZC3H11A-208ENST00000466470 UNC13AQ9UPW8 1703 aa18.44■□□□□ 0.54
ZC3H11A-208ENST00000466470 SCRIBQ14160 1630 aa18.41■□□□□ 0.54
ZC3H11A-208ENST00000466470 CNKSR2Q8WXI2 1034 aa18.41■□□□□ 0.54
ZC3H11A-208ENST00000466470 BICRAQ9NZM4 1560 aa18.36■□□□□ 0.53
ZC3H11A-208ENST00000466470 DNAJC5BQ9UF47 199 aa18.3■□□□□ 0.52
ZC3H11A-208ENST00000466470 HOXD11P31277 338 aaPredicted RBP18.28■□□□□ 0.52
ZC3H11A-208ENST00000466470 RNF216Q9NWF9 866 aaPredicted RBP18.18■□□□□ 0.5
ZC3H11A-208ENST00000466470 NCBP3Q53F19 620 aaKnown RBP18.15■□□□□ 0.5
ZC3H11A-208ENST00000466470 SHROOM4Q9ULL8 1493 aa18.1■□□□□ 0.49
ZC3H11A-208ENST00000466470 NPM3O75607 178 aaKnown RBP17.95■□□□□ 0.46
ZC3H11A-208ENST00000466470 DCAF8L1A6NGE4 600 aa17.92■□□□□ 0.46
ZC3H11A-208ENST00000466470 EIF4G1Q04637 1599 aaKnown RBP17.91■□□□□ 0.46
ZC3H11A-208ENST00000466470 CC2D2AQ9P2K1 1620 aa17.87■□□□□ 0.45
ZC3H11A-208ENST00000466470 KCNA4P22459 653 aa17.85■□□□□ 0.45
ZC3H11A-208ENST00000466470 CECR2Q9BXF3 1484 aa17.82■□□□□ 0.44
ZC3H11A-208ENST00000466470 RNF39Q9H2S5 420 aa17.6■□□□□ 0.41
ZC3H11A-208ENST00000466470 SMARCA4P51532 1647 aa17.53■□□□□ 0.4
ZC3H11A-208ENST00000466470 BAZ1AQ9NRL2 1556 aaPredicted RBP17.5■□□□□ 0.39
ZC3H11A-208ENST00000466470 ATAD2BQ9ULI0 1458 aa17.49■□□□□ 0.39
ZC3H11A-208ENST00000466470 NCAPD3P42695 1498 aa17.45■□□□□ 0.38
ZC3H11A-208ENST00000466470 CACNB1Q02641 598 aaPredicted RBP17.44■□□□□ 0.38
ZC3H11A-208ENST00000466470 SMARCA2P51531 1590 aa17.44■□□□□ 0.38
ZC3H11A-208ENST00000466470 MROH2BQ7Z745 1585 aa17.44■□□□□ 0.38
ZC3H11A-208ENST00000466470 BAZ1BQ9UIG0 1483 aaKnown RBP17.37■□□□□ 0.37
ZC3H11A-208ENST00000466470 HMGXB3Q12766 1538 aa17.33■□□□□ 0.37
ZC3H11A-208ENST00000466470 C1QBPQ07021 282 aaKnown RBP17.33■□□□□ 0.36
ZC3H11A-208ENST00000466470 PEG3Q9GZU2 1588 aa17.29■□□□□ 0.36
ZC3H11A-208ENST00000466470 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.29■□□□□ 0.366e-7■□□□□ 9.3
ZC3H11A-208ENST00000466470 WIZO95785 1651 aa17.23■□□□□ 0.35
ZC3H11A-208ENST00000466470 RSF1Q96T23 1441 aaPredicted RBP17.21■□□□□ 0.35
ZC3H11A-208ENST00000466470 NESP48681 1621 aa17.14■□□□□ 0.33
ZC3H11A-208ENST00000466470 ERCC6Q03468 1493 aa17.13■□□□□ 0.33
ZC3H11A-208ENST00000466470 SLC4A2P04920 1241 aa17.08■□□□□ 0.32
ZC3H11A-208ENST00000466470 U3KPZ7 1027 aaPredicted RBP17.05■□□□□ 0.32
ZC3H11A-208ENST00000466470 TOP2AP11388 1531 aaKnown RBP17.02■□□□□ 0.32
ZC3H11A-208ENST00000466470 CADPSQ9ULU8 1353 aa16.99■□□□□ 0.31
ZC3H11A-208ENST00000466470 LAMC3Q9Y6N6 1575 aa16.98■□□□□ 0.31
ZC3H11A-208ENST00000466470 PDS5BQ9NTI5 1447 aa16.95■□□□□ 0.3
ZC3H11A-208ENST00000466470 SUPT5HO00267 1087 aaKnown RBP16.9■□□□□ 0.3
ZC3H11A-208ENST00000466470 SLC4A1APQ9BWU0 796 aaKnown RBP16.88■□□□□ 0.29
ZC3H11A-208ENST00000466470 CCDC88BA6NC98 1476 aa16.87■□□□□ 0.29
ZC3H11A-208ENST00000466470 CUX2O14529 1486 aa16.86■□□□□ 0.29
ZC3H11A-208ENST00000466470 KIF21AQ7Z4S6 1674 aa16.85■□□□□ 0.29
ZC3H11A-208ENST00000466470 CFTRP13569 1480 aa16.84■□□□□ 0.29
ZC3H11A-208ENST00000466470 FANCD2Q9BXW9 1451 aa16.81■□□□□ 0.28
ZC3H11A-208ENST00000466470 THOC2Q8NI27 1593 aaKnown RBP16.8■□□□□ 0.28
ZC3H11A-208ENST00000466470 CEP164Q9UPV0 1460 aa16.79■□□□□ 0.28
ZC3H11A-208ENST00000466470 MRC2Q9UBG0 1479 aa16.76■□□□□ 0.27
ZC3H11A-208ENST00000466470 SPINK5Q9NQ38 1064 aaPredicted RBP16.71■□□□□ 0.27
ZC3H11A-208ENST00000466470 WDR62O43379 1518 aa16.66■□□□□ 0.26
ZC3H11A-208ENST00000466470 URB2Q14146 1524 aaKnown RBP16.63■□□□□ 0.25
ZC3H11A-208ENST00000466470 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.62■□□□□ 0.25
ZC3H11A-208ENST00000466470 HNRNPUL2Q1KMD3 747 aaKnown RBP16.62■□□□□ 0.25
ZC3H11A-208ENST00000466470 CAPN15O75808 1086 aa16.6■□□□□ 0.25
ZC3H11A-208ENST00000466470 MYCNP04198 464 aaPredicted RBP16.6■□□□□ 0.25
ZC3H11A-208ENST00000466470 PRDM2Q13029 1718 aa16.59■□□□□ 0.25
ZC3H11A-208ENST00000466470 FOXD4L1Q9NU39 408 aa16.58■□□□□ 0.24
ZC3H11A-208ENST00000466470 APLP2Q06481 763 aa16.56■□□□□ 0.24
ZC3H11A-208ENST00000466470 SAMD1Q6SPF0 538 aaPredicted RBP16.55■□□□□ 0.24
ZC3H11A-208ENST00000466470 DSG3P32926 999 aa16.54■□□□□ 0.24
ZC3H11A-208ENST00000466470 DNAJC5Q9H3Z4 198 aa16.51■□□□□ 0.23
ZC3H11A-208ENST00000466470 TOPBP1Q92547 1522 aa16.5■□□□□ 0.23
ZC3H11A-208ENST00000466470 ZBTB22O15209 634 aa16.46■□□□□ 0.23
ZC3H11A-208ENST00000466470 ABCC8Q09428 1581 aa16.46■□□□□ 0.23
ZC3H11A-208ENST00000466470 DNMBPQ6XZF7 1577 aa16.46■□□□□ 0.23
ZC3H11A-208ENST00000466470 ZNF219Q9P2Y4 722 aaPredicted RBP16.43■□□□□ 0.22
ZC3H11A-208ENST00000466470 IFT140Q96RY7 1462 aa16.42■□□□□ 0.22
ZC3H11A-208ENST00000466470 ZNF608Q9ULD9 1512 aaPredicted RBP16.4■□□□□ 0.22
ZC3H11A-208ENST00000466470 TRHP20396 242 aaPredicted RBP16.38■□□□□ 0.21
ZC3H11A-208ENST00000466470 POLA1P09884 1462 aaPredicted RBP16.37■□□□□ 0.21
ZC3H11A-208ENST00000466470 CUX1P39880 1505 aa16.36■□□□□ 0.21
ZC3H11A-208ENST00000466470 RAD54L2Q9Y4B4 1467 aa16.35■□□□□ 0.21
ZC3H11A-208ENST00000466470 SOGA1O94964 1423 aa16.34■□□□□ 0.21
ZC3H11A-208ENST00000466470 FGD5Q6ZNL6 1462 aa16.34■□□□□ 0.21
ZC3H11A-208ENST00000466470 AQRO60306 1485 aaKnown RBP eCLIP16.32■□□□□ 0.21e-6■■■□□ 18.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms