RNA–Protein interactions for RNA: ENST00000494877.5

GABBR1-220, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 5

Gene GABBR1, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-220ENST00000494877 NISCHQ9Y2I1 1504 aa37.32■■■■□ 3.56
GABBR1-220ENST00000494877 CCDC180Q9P1Z9 1646 aa32.16■■■□□ 2.74
GABBR1-220ENST00000494877 ZCCHC6Q5VYS8 1495 aaKnown RBP31.46■■■□□ 2.63
GABBR1-220ENST00000494877 SHROOM4Q9ULL8 1493 aa31.01■■■□□ 2.56
GABBR1-220ENST00000494877 DCAF1Q9Y4B6 1507 aa30.8■■■□□ 2.52
GABBR1-220ENST00000494877 DCAF8L2P0C7V8 631 aa30.76■■■□□ 2.51
GABBR1-220ENST00000494877 ABCC9O60706 1549 aa30.46■■■□□ 2.47
GABBR1-220ENST00000494877 MYO15BQ96JP2 1530 aa30.18■■■□□ 2.42
GABBR1-220ENST00000494877 SUPT5HO00267 1087 aaKnown RBP30.18■■■□□ 2.42
GABBR1-220ENST00000494877 NACADO15069 1562 aa29.84■■■□□ 2.37
GABBR1-220ENST00000494877 SCRIBQ14160 1630 aa29.76■■■□□ 2.36
GABBR1-220ENST00000494877 RB1CC1Q8TDY2 1594 aa29.58■■■□□ 2.33
GABBR1-220ENST00000494877 RSF1Q96T23 1441 aaPredicted RBP29.23■■■□□ 2.27
GABBR1-220ENST00000494877 CHIC1Q5VXU3 224 aa29.19■■■□□ 2.26
GABBR1-220ENST00000494877 CECR2Q9BXF3 1484 aa28.99■■■□□ 2.23
GABBR1-220ENST00000494877 UNC13AQ9UPW8 1703 aa28.93■■■□□ 2.22
GABBR1-220ENST00000494877 MROH2BQ7Z745 1585 aa28.88■■■□□ 2.21
GABBR1-220ENST00000494877 PABPN1Q86U42 306 aaKnown RBP eCLIP28.83■■■□□ 2.21
GABBR1-220ENST00000494877 BAZ1AQ9NRL2 1556 aaPredicted RBP28.74■■■□□ 2.19
GABBR1-220ENST00000494877 BICRAQ9NZM4 1560 aa28.7■■■□□ 2.18
GABBR1-220ENST00000494877 WIZO95785 1651 aa28.68■■■□□ 2.18
GABBR1-220ENST00000494877 SMARCA4P51532 1647 aa28.53■■■□□ 2.16
GABBR1-220ENST00000494877 TOP2AP11388 1531 aaKnown RBP28.35■■■□□ 2.13
GABBR1-220ENST00000494877 TRIM41Q8WV44 630 aa28.3■■■□□ 2.12
GABBR1-220ENST00000494877 LOC105371045A0A1W2PR82 267 aa28.15■■■□□ 2.1
GABBR1-220ENST00000494877 PEG3Q9GZU2 1588 aa28.14■■■□□ 2.09
GABBR1-220ENST00000494877 EIF4G1Q04637 1599 aaKnown RBP28.13■■■□□ 2.09
GABBR1-220ENST00000494877 CCDC88BA6NC98 1476 aa28.13■■■□□ 2.09
GABBR1-220ENST00000494877 SMARCA2P51531 1590 aa28.12■■■□□ 2.09
GABBR1-220ENST00000494877 ATAD2BQ9ULI0 1458 aa27.93■■■□□ 2.06
GABBR1-220ENST00000494877 FAM9AQ8IZU1 332 aaPredicted RBP27.84■■■□□ 2.05
GABBR1-220ENST00000494877 BAZ1BQ9UIG0 1483 aaKnown RBP27.81■■■□□ 2.04
GABBR1-220ENST00000494877 ABCC8Q09428 1581 aa27.76■■■□□ 2.03
GABBR1-220ENST00000494877 NCAPD3P42695 1498 aa27.57■■■□□ 2
GABBR1-220ENST00000494877 PCGF6Q9BYE7 350 aa27.55■■■□□ 2
GABBR1-220ENST00000494877 HMGXB3Q12766 1538 aa27.55■■■□□ 2
GABBR1-220ENST00000494877 WRNQ14191 1432 aaPredicted RBP eCLIP27.49■■□□□ 1.99
GABBR1-220ENST00000494877 EHMT2Q96KQ7 1210 aa27.46■■□□□ 1.99
GABBR1-220ENST00000494877 CC2D2AQ9P2K1 1620 aa27.46■■□□□ 1.99
GABBR1-220ENST00000494877 EEA1Q15075 1411 aa27.4■■□□□ 1.98
GABBR1-220ENST00000494877 SOGA1O94964 1423 aa27.39■■□□□ 1.98
GABBR1-220ENST00000494877 TRIM26Q12899 539 aaPredicted RBP27.34■■□□□ 1.97
GABBR1-220ENST00000494877 SYNJ1O43426 1573 aa27.34■■□□□ 1.97
GABBR1-220ENST00000494877 CSRNP3Q8WYN3 585 aa27.27■■□□□ 1.96
GABBR1-220ENST00000494877 HRCP23327 699 aa27.25■■□□□ 1.95
GABBR1-220ENST00000494877 RUSC2Q8N2Y8 1516 aa27.25■■□□□ 1.95
GABBR1-220ENST00000494877 TOP2BQ02880 1626 aa27.16■■□□□ 1.94
GABBR1-220ENST00000494877 CFTRP13569 1480 aa27.15■■□□□ 1.94
GABBR1-220ENST00000494877 TNIKQ9UKE5 1360 aa27.13■■□□□ 1.93
GABBR1-220ENST00000494877 BIVM-ERCC5R4GMW8 1640 aa27.09■■□□□ 1.93
GABBR1-220ENST00000494877 GOLGA3Q08378 1498 aa27.07■■□□□ 1.92
GABBR1-220ENST00000494877 CEP162Q5TB80 1403 aa27.05■■□□□ 1.92
GABBR1-220ENST00000494877 UBTFP17480 764 aaKnown RBP27.01■■□□□ 1.91
GABBR1-220ENST00000494877 CEP164Q9UPV0 1460 aa27.01■■□□□ 1.91
GABBR1-220ENST00000494877 KIF21BO75037 1637 aa27■■□□□ 1.91
GABBR1-220ENST00000494877 PRDM2Q13029 1718 aa26.98■■□□□ 1.91
GABBR1-220ENST00000494877 DNAJC5BQ9UF47 199 aa26.97■■□□□ 1.91
GABBR1-220ENST00000494877 CUX1P39880 1505 aa26.95■■□□□ 1.91
GABBR1-220ENST00000494877 CADPSQ9ULU8 1353 aa26.94■■□□□ 1.9
GABBR1-220ENST00000494877 PPARGC1BQ86YN6 1023 aaKnown RBP26.79■■□□□ 1.88
GABBR1-220ENST00000494877 RAPGEF2Q9Y4G8 1499 aa26.79■■□□□ 1.88
GABBR1-220ENST00000494877 NESP48681 1621 aa26.74■■□□□ 1.87
GABBR1-220ENST00000494877 KIF27Q86VH2 1401 aa26.74■■□□□ 1.87
GABBR1-220ENST00000494877 PRXQ9BXM0 1461 aa26.71■■□□□ 1.87
GABBR1-220ENST00000494877 ERICH3Q5RHP9 1530 aa26.71■■□□□ 1.87
GABBR1-220ENST00000494877 CLIP1P30622 1438 aa26.69■■□□□ 1.86
GABBR1-220ENST00000494877 FANCD2Q9BXW9 1451 aa26.64■■□□□ 1.85
GABBR1-220ENST00000494877 LAMC3Q9Y6N6 1575 aa26.58■■□□□ 1.85
GABBR1-220ENST00000494877 ZEB1P37275 1124 aaPredicted RBP26.57■■□□□ 1.84
GABBR1-220ENST00000494877 FGD5Q6ZNL6 1462 aa26.56■■□□□ 1.84
GABBR1-220ENST00000494877 VPS8Q8N3P4 1428 aa26.53■■□□□ 1.84
GABBR1-220ENST00000494877 CUX2O14529 1486 aa26.53■■□□□ 1.84
GABBR1-220ENST00000494877 DNMBPQ6XZF7 1577 aa26.48■■□□□ 1.83
GABBR1-220ENST00000494877 PDS5BQ9NTI5 1447 aa26.47■■□□□ 1.83
GABBR1-220ENST00000494877 IGF1RP08069 1367 aa26.46■■□□□ 1.83
GABBR1-220ENST00000494877 TTBK1Q5TCY1 1321 aaPredicted RBP26.45■■□□□ 1.82
GABBR1-220ENST00000494877 RANGAP1P46060 587 aaPredicted RBP26.41■■□□□ 1.82
GABBR1-220ENST00000494877 TOPBP1Q92547 1522 aa26.41■■□□□ 1.82
GABBR1-220ENST00000494877 APLP2Q06481 763 aa26.34■■□□□ 1.81
GABBR1-220ENST00000494877 POLA1P09884 1462 aaPredicted RBP26.34■■□□□ 1.81
GABBR1-220ENST00000494877 CARMIL1Q5VZK9 1371 aa26.33■■□□□ 1.81
GABBR1-220ENST00000494877 ARAP1Q96P48 1450 aa26.33■■□□□ 1.81
GABBR1-220ENST00000494877 ABCA10Q8WWZ4 1543 aa26.33■■□□□ 1.81
GABBR1-220ENST00000494877 KIF21AQ7Z4S6 1674 aa26.3■■□□□ 1.8
GABBR1-220ENST00000494877 RAD54L2Q9Y4B4 1467 aa26.29■■□□□ 1.8
GABBR1-220ENST00000494877 URB2Q14146 1524 aaKnown RBP26.28■■□□□ 1.8
GABBR1-220ENST00000494877 ARHGAP35Q9NRY4 1499 aa26.21■■□□□ 1.79
GABBR1-220ENST00000494877 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.21■■□□□ 1.79
GABBR1-220ENST00000494877 CCER1Q8TC90 406 aaPredicted RBP26.18■■□□□ 1.78
GABBR1-220ENST00000494877 WDR97A6NE52 1622 aa26.13■■□□□ 1.77
GABBR1-220ENST00000494877 CUL7Q14999 1698 aa26.12■■□□□ 1.77
GABBR1-220ENST00000494877 MRC2Q9UBG0 1479 aa26.11■■□□□ 1.77
GABBR1-220ENST00000494877 ERCC6Q03468 1493 aa26.1■■□□□ 1.77
GABBR1-220ENST00000494877 ABCA5Q8WWZ7 1642 aa26.03■■□□□ 1.76
GABBR1-220ENST00000494877 TDRD9Q8NDG6 1382 aaKnown RBP26■■□□□ 1.75
GABBR1-220ENST00000494877 KANK4Q5T7N3 995 aaPredicted RBP26■■□□□ 1.75
GABBR1-220ENST00000494877 GAPVD1Q14C86 1478 aa25.99■■□□□ 1.75
GABBR1-220ENST00000494877 HNRNPUL2Q1KMD3 747 aaKnown RBP25.97■■□□□ 1.75
GABBR1-220ENST00000494877 TARBP1Q13395 1621 aaKnown RBP25.95■■□□□ 1.74
GABBR1-220ENST00000494877 MAP3K1Q13233 1512 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms