RNA–Protein interactions for RNA: ENST00000461980.1

ZC3H11A-207, Transcript of zinc finger CCCH-type containing 11A, humanhuman

TSL 2

Gene ZC3H11A, Length 822 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H11A-207ENST00000461980 AEBP2Q6ZN18 517 aaPredicted RBP23.96■■□□□ 1.43
ZC3H11A-207ENST00000461980 CHIC1Q5VXU3 224 aa22.72■■□□□ 1.23
ZC3H11A-207ENST00000461980 SENP3Q9H4L4 574 aaPredicted RBP20.4■□□□□ 0.86
ZC3H11A-207ENST00000461980 PHF23Q9BUL5 403 aaPredicted RBP20.13■□□□□ 0.81
ZC3H11A-207ENST00000461980 NISCHQ9Y2I1 1504 aa20.07■□□□□ 0.8
ZC3H11A-207ENST00000461980 FOXD1Q16676 465 aa19.03■□□□□ 0.64
ZC3H11A-207ENST00000461980 ABCC9O60706 1549 aa18.33■□□□□ 0.52
ZC3H11A-207ENST00000461980 PLPPR3Q6T4P5 718 aa18.11■□□□□ 0.49
ZC3H11A-207ENST00000461980 CCDC180Q9P1Z9 1646 aa18.11■□□□□ 0.49
ZC3H11A-207ENST00000461980 MSH5O43196 834 aa17.8■□□□□ 0.44
ZC3H11A-207ENST00000461980 PPP6R1Q9UPN7 881 aa17.78■□□□□ 0.44
ZC3H11A-207ENST00000461980 PIAS4Q8N2W9 510 aaPredicted RBP17.74■□□□□ 0.43
ZC3H11A-207ENST00000461980 ADRA2BP18089 450 aa17.68■□□□□ 0.42
ZC3H11A-207ENST00000461980 POTEDQ86YR6 584 aa17.43■□□□□ 0.38
ZC3H11A-207ENST00000461980 RB1CC1Q8TDY2 1594 aa17.29■□□□□ 0.36
ZC3H11A-207ENST00000461980 DNAJC5BQ9UF47 199 aa17.28■□□□□ 0.36
ZC3H11A-207ENST00000461980 NACADO15069 1562 aa17.09■□□□□ 0.33
ZC3H11A-207ENST00000461980 UNC13AQ9UPW8 1703 aa17.08■□□□□ 0.32
ZC3H11A-207ENST00000461980 DCAF8L2P0C7V8 631 aa17.07■□□□□ 0.32
ZC3H11A-207ENST00000461980 PABPN1Q86U42 306 aaKnown RBP eCLIP17.01■□□□□ 0.31
ZC3H11A-207ENST00000461980 BICRAQ9NZM4 1560 aa16.85■□□□□ 0.29
ZC3H11A-207ENST00000461980 MYO15BQ96JP2 1530 aa16.71■□□□□ 0.27
ZC3H11A-207ENST00000461980 ZCCHC6Q5VYS8 1495 aaKnown RBP16.61■□□□□ 0.25
ZC3H11A-207ENST00000461980 SCRIBQ14160 1630 aa16.59■□□□□ 0.25
ZC3H11A-207ENST00000461980 CC2D2AQ9P2K1 1620 aa16.53■□□□□ 0.24
ZC3H11A-207ENST00000461980 DCAF1Q9Y4B6 1507 aa16.49■□□□□ 0.23
ZC3H11A-207ENST00000461980 CECR2Q9BXF3 1484 aa16.47■□□□□ 0.23
ZC3H11A-207ENST00000461980 EIF4G1Q04637 1599 aaKnown RBP16.43■□□□□ 0.22
ZC3H11A-207ENST00000461980 SHROOM4Q9ULL8 1493 aa16.43■□□□□ 0.22
ZC3H11A-207ENST00000461980 MAPK8IP2Q13387 824 aaPredicted RBP16.25■□□□□ 0.19
ZC3H11A-207ENST00000461980 DMRT2Q9Y5R5 561 aa16.2■□□□□ 0.18
ZC3H11A-207ENST00000461980 SCAF1Q9H7N4 1312 aaKnown RBP16.15■□□□□ 0.18
ZC3H11A-207ENST00000461980 DNAJC5Q9H3Z4 198 aa15.89■□□□□ 0.13
ZC3H11A-207ENST00000461980 PPP4R3CPQ6ZMV5 832 aa15.87■□□□□ 0.13
ZC3H11A-207ENST00000461980 ERCC6Q03468 1493 aa15.79■□□□□ 0.12
ZC3H11A-207ENST00000461980 NCAPD3P42695 1498 aa15.75■□□□□ 0.11
ZC3H11A-207ENST00000461980 SMARCA4P51532 1647 aa15.75■□□□□ 0.11
ZC3H11A-207ENST00000461980 ATAD2BQ9ULI0 1458 aa15.74■□□□□ 0.11
ZC3H11A-207ENST00000461980 CUX2O14529 1486 aa15.73■□□□□ 0.11
ZC3H11A-207ENST00000461980 NESP48681 1621 aa15.72■□□□□ 0.11
ZC3H11A-207ENST00000461980 SMARCA2P51531 1590 aa15.67■□□□□ 0.1
ZC3H11A-207ENST00000461980 HMGXB3Q12766 1538 aa15.67■□□□□ 0.1
ZC3H11A-207ENST00000461980 HOXD11P31277 338 aaPredicted RBP15.62■□□□□ 0.09
ZC3H11A-207ENST00000461980 BAZ1BQ9UIG0 1483 aaKnown RBP15.6■□□□□ 0.09
ZC3H11A-207ENST00000461980 CNKSR2Q8WXI2 1034 aa15.59■□□□□ 0.09
ZC3H11A-207ENST00000461980 BAZ1AQ9NRL2 1556 aaPredicted RBP15.58■□□□□ 0.09
ZC3H11A-207ENST00000461980 THOC2Q8NI27 1593 aaKnown RBP15.58■□□□□ 0.08
ZC3H11A-207ENST00000461980 KIF21AQ7Z4S6 1674 aa15.57■□□□□ 0.08
ZC3H11A-207ENST00000461980 MROH2BQ7Z745 1585 aa15.52■□□□□ 0.07
ZC3H11A-207ENST00000461980 PEG3Q9GZU2 1588 aa15.51■□□□□ 0.07
ZC3H11A-207ENST00000461980 LAMC3Q9Y6N6 1575 aa15.48■□□□□ 0.07
ZC3H11A-207ENST00000461980 RNF216Q9NWF9 866 aaPredicted RBP15.46■□□□□ 0.07
ZC3H11A-207ENST00000461980 DCAF8L1A6NGE4 600 aa15.41■□□□□ 0.06
ZC3H11A-207ENST00000461980 WIZO95785 1651 aa15.39■□□□□ 0.05
ZC3H11A-207ENST00000461980 PDS5BQ9NTI5 1447 aa15.34■□□□□ 0.05
ZC3H11A-207ENST00000461980 MRC2Q9UBG0 1479 aa15.29■□□□□ 0.04
ZC3H11A-207ENST00000461980 CADPSQ9ULU8 1353 aa15.27■□□□□ 0.04
ZC3H11A-207ENST00000461980 TRIM41Q8WV44 630 aa15.27■□□□□ 0.04
ZC3H11A-207ENST00000461980 WDR62O43379 1518 aa15.26■□□□□ 0.03
ZC3H11A-207ENST00000461980 CACNB1Q02641 598 aaPredicted RBP15.25■□□□□ 0.03
ZC3H11A-207ENST00000461980 RNF39Q9H2S5 420 aa15.22■□□□□ 0.03
ZC3H11A-207ENST00000461980 NCBP3Q53F19 620 aaKnown RBP15.21■□□□□ 0.03
ZC3H11A-207ENST00000461980 CEP164Q9UPV0 1460 aa15.2■□□□□ 0.02
ZC3H11A-207ENST00000461980 FANCD2Q9BXW9 1451 aa15.17■□□□□ 0.02
ZC3H11A-207ENST00000461980 TOP2AP11388 1531 aaKnown RBP15.09■□□□□ 0.01
ZC3H11A-207ENST00000461980 PRDM2Q13029 1718 aa15.09■□□□□ 0.01
ZC3H11A-207ENST00000461980 CFTRP13569 1480 aa15.08■□□□□ 0.01
ZC3H11A-207ENST00000461980 URB2Q14146 1524 aaKnown RBP15.08■□□□□ 0.01
ZC3H11A-207ENST00000461980 RSF1Q96T23 1441 aaPredicted RBP15.08■□□□□ 0
ZC3H11A-207ENST00000461980 NPM3O75607 178 aaKnown RBP15.05■□□□□ -0
ZC3H11A-207ENST00000461980 C1QBPQ07021 282 aaKnown RBP14.97□□□□□ -0.01
ZC3H11A-207ENST00000461980 OSCARQ8IYS5 282 aa14.96□□□□□ -0.01
ZC3H11A-207ENST00000461980 RIMBP3CA6NJZ7 1639 aa14.95□□□□□ -0.02
ZC3H11A-207ENST00000461980 RIMBP3BA6NNM3 1639 aa14.95□□□□□ -0.02
ZC3H11A-207ENST00000461980 RIMBP3Q9UFD9 1639 aa14.95□□□□□ -0.02
ZC3H11A-207ENST00000461980 ZNF608Q9ULD9 1512 aaPredicted RBP14.94□□□□□ -0.02
ZC3H11A-207ENST00000461980 CCDC88BA6NC98 1476 aa14.92□□□□□ -0.02
ZC3H11A-207ENST00000461980 EIF4G3O43432 1585 aaKnown RBP14.88□□□□□ -0.03
ZC3H11A-207ENST00000461980 TOPBP1Q92547 1522 aa14.87□□□□□ -0.03
ZC3H11A-207ENST00000461980 CHD1O14646 1710 aa14.86□□□□□ -0.03
ZC3H11A-207ENST00000461980 IFT140Q96RY7 1462 aa14.86□□□□□ -0.03
ZC3H11A-207ENST00000461980 ARHGEF11O15085 1522 aa14.83□□□□□ -0.04
ZC3H11A-207ENST00000461980 DNMBPQ6XZF7 1577 aa14.81□□□□□ -0.04
ZC3H11A-207ENST00000461980 TARBP1Q13395 1621 aaKnown RBP14.78□□□□□ -0.04
ZC3H11A-207ENST00000461980 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.77□□□□□ -0.056e-7■□□□□ 9.3
ZC3H11A-207ENST00000461980 AQRO60306 1485 aaKnown RBP eCLIP14.76□□□□□ -0.051e-6■■■□□ 18.9
ZC3H11A-207ENST00000461980 KCNA4P22459 653 aa14.72□□□□□ -0.05
ZC3H11A-207ENST00000461980 ABCC8Q09428 1581 aa14.72□□□□□ -0.05
ZC3H11A-207ENST00000461980 POLA1P09884 1462 aaPredicted RBP14.71□□□□□ -0.05
ZC3H11A-207ENST00000461980 RAD54L2Q9Y4B4 1467 aa14.7□□□□□ -0.06
ZC3H11A-207ENST00000461980 FBLN2P98095 1184 aa14.7□□□□□ -0.06
ZC3H11A-207ENST00000461980 CYB5RLQ6IPT4 315 aa14.7□□□□□ -0.06
ZC3H11A-207ENST00000461980 ARAP1Q96P48 1450 aa14.69□□□□□ -0.06
ZC3H11A-207ENST00000461980 TDRD9Q8NDG6 1382 aaKnown RBP14.64□□□□□ -0.07
ZC3H11A-207ENST00000461980 SNAPC4Q5SXM2 1469 aa14.62□□□□□ -0.07
ZC3H11A-207ENST00000461980 FGD5Q6ZNL6 1462 aa14.62□□□□□ -0.07
ZC3H11A-207ENST00000461980 TRHP20396 242 aaPredicted RBP14.61□□□□□ -0.07
ZC3H11A-207ENST00000461980 SOGA1O94964 1423 aa14.6□□□□□ -0.07
ZC3H11A-207ENST00000461980 CUX1P39880 1505 aa14.59□□□□□ -0.07
ZC3H11A-207ENST00000461980 WDR97A6NE52 1622 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms