RNA–Protein interactions for RNA: ENST00000555357.1

CDK2-207, Transcript of cyclin dependent kinase 2, humanhuman

TSL 5

Gene CDK2, Length 1,367 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2-207ENST00000555357 NISCHQ9Y2I1 1504 aa32.08■■■□□ 2.73
CDK2-207ENST00000555357 CCDC180Q9P1Z9 1646 aa28.61■■■□□ 2.17
CDK2-207ENST00000555357 ABCC9O60706 1549 aa28.3■■■□□ 2.12
CDK2-207ENST00000555357 RB1CC1Q8TDY2 1594 aa27.06■■□□□ 1.92
CDK2-207ENST00000555357 DCAF8L2P0C7V8 631 aa27■■□□□ 1.91
CDK2-207ENST00000555357 NACADO15069 1562 aa26.95■■□□□ 1.9
CDK2-207ENST00000555357 ZCCHC6Q5VYS8 1495 aaKnown RBP26.68■■□□□ 1.86
CDK2-207ENST00000555357 MYO15BQ96JP2 1530 aa26.65■■□□□ 1.86
CDK2-207ENST00000555357 UNC13AQ9UPW8 1703 aa26.48■■□□□ 1.83
CDK2-207ENST00000555357 DCAF1Q9Y4B6 1507 aa26.48■■□□□ 1.83
CDK2-207ENST00000555357 PABPN1Q86U42 306 aaKnown RBP eCLIP26.41■■□□□ 1.82
CDK2-207ENST00000555357 BICRAQ9NZM4 1560 aa26.25■■□□□ 1.79
CDK2-207ENST00000555357 DNAJC5BQ9UF47 199 aa26.2■■□□□ 1.78
CDK2-207ENST00000555357 SCRIBQ14160 1630 aa26.18■■□□□ 1.78
CDK2-207ENST00000555357 SHROOM4Q9ULL8 1493 aa25.87■■□□□ 1.73
CDK2-207ENST00000555357 EIF4G1Q04637 1599 aaKnown RBP25.59■■□□□ 1.69
CDK2-207ENST00000555357 CC2D2AQ9P2K1 1620 aa25.56■■□□□ 1.68
CDK2-207ENST00000555357 CECR2Q9BXF3 1484 aa25.42■■□□□ 1.66
CDK2-207ENST00000555357 AEBP2Q6ZN18 517 aaPredicted RBP25.24■■□□□ 1.63
CDK2-207ENST00000555357 SMARCA4P51532 1647 aa24.97■■□□□ 1.59
CDK2-207ENST00000555357 BAZ1AQ9NRL2 1556 aaPredicted RBP24.88■■□□□ 1.57
CDK2-207ENST00000555357 ATAD2BQ9ULI0 1458 aa24.86■■□□□ 1.57
CDK2-207ENST00000555357 NCAPD3P42695 1498 aa24.85■■□□□ 1.57
CDK2-207ENST00000555357 SMARCA2P51531 1590 aa24.82■■□□□ 1.56
CDK2-207ENST00000555357 MROH2BQ7Z745 1585 aa24.76■■□□□ 1.55
CDK2-207ENST00000555357 HMGXB3Q12766 1538 aa24.73■■□□□ 1.55
CDK2-207ENST00000555357 BAZ1BQ9UIG0 1483 aaKnown RBP24.68■■□□□ 1.54
CDK2-207ENST00000555357 PEG3Q9GZU2 1588 aa24.67■■□□□ 1.54
CDK2-207ENST00000555357 WIZO95785 1651 aa24.5■■□□□ 1.51
CDK2-207ENST00000555357 NESP48681 1621 aa24.42■■□□□ 1.5
CDK2-207ENST00000555357 ERCC6Q03468 1493 aa24.41■■□□□ 1.5
CDK2-207ENST00000555357 RSF1Q96T23 1441 aaPredicted RBP24.37■■□□□ 1.49
CDK2-207ENST00000555357 LAMC3Q9Y6N6 1575 aa24.25■■□□□ 1.47
CDK2-207ENST00000555357 TOP2AP11388 1531 aaKnown RBP24.2■■□□□ 1.46
CDK2-207ENST00000555357 CUX2O14529 1486 aa24.16■■□□□ 1.46
CDK2-207ENST00000555357 CADPSQ9ULU8 1353 aa24.14■■□□□ 1.45
CDK2-207ENST00000555357 KIF21AQ7Z4S6 1674 aa24.13■■□□□ 1.45
CDK2-207ENST00000555357 PDS5BQ9NTI5 1447 aa24.1■■□□□ 1.45
CDK2-207ENST00000555357 THOC2Q8NI27 1593 aaKnown RBP24.07■■□□□ 1.44
CDK2-207ENST00000555357 CFTRP13569 1480 aa23.94■■□□□ 1.42
CDK2-207ENST00000555357 CCDC88BA6NC98 1476 aa23.91■■□□□ 1.42
CDK2-207ENST00000555357 FANCD2Q9BXW9 1451 aa23.89■■□□□ 1.42
CDK2-207ENST00000555357 MRC2Q9UBG0 1479 aa23.89■■□□□ 1.42
CDK2-207ENST00000555357 CEP164Q9UPV0 1460 aa23.89■■□□□ 1.42
CDK2-207ENST00000555357 DNAJC5Q9H3Z4 198 aa23.88■■□□□ 1.41
CDK2-207ENST00000555357 WDR62O43379 1518 aa23.82■■□□□ 1.4
CDK2-207ENST00000555357 PRDM2Q13029 1718 aa23.78■■□□□ 1.4
CDK2-207ENST00000555357 URB2Q14146 1524 aaKnown RBP23.68■■□□□ 1.38
CDK2-207ENST00000555357 SUPT5HO00267 1087 aaKnown RBP23.67■■□□□ 1.38
CDK2-207ENST00000555357 CHIC1Q5VXU3 224 aa23.55■■□□□ 1.36
CDK2-207ENST00000555357 TOPBP1Q92547 1522 aa23.49■■□□□ 1.35
CDK2-207ENST00000555357 DNMBPQ6XZF7 1577 aa23.44■■□□□ 1.34
CDK2-207ENST00000555357 ABCC8Q09428 1581 aa23.41■■□□□ 1.34
CDK2-207ENST00000555357 IFT140Q96RY7 1462 aa23.38■■□□□ 1.33
CDK2-207ENST00000555357 ZNF608Q9ULD9 1512 aaPredicted RBP23.34■■□□□ 1.33
CDK2-207ENST00000555357 POLA1P09884 1462 aaPredicted RBP23.28■■□□□ 1.32
CDK2-207ENST00000555357 CUX1P39880 1505 aa23.24■■□□□ 1.31
CDK2-207ENST00000555357 EIF4G3O43432 1585 aaKnown RBP23.24■■□□□ 1.31
CDK2-207ENST00000555357 TARBP1Q13395 1621 aaKnown RBP23.24■■□□□ 1.31
CDK2-207ENST00000555357 FGD5Q6ZNL6 1462 aa23.2■■□□□ 1.31
CDK2-207ENST00000555357 RAD54L2Q9Y4B4 1467 aa23.2■■□□□ 1.31
CDK2-207ENST00000555357 AQRO60306 1485 aaKnown RBP eCLIP23.16■■□□□ 1.31e-19■■■■■ 87.5
CDK2-207ENST00000555357 SOGA1O94964 1423 aa23.16■■□□□ 1.3
CDK2-207ENST00000555357 OSCARQ8IYS5 282 aa23.13■■□□□ 1.29
CDK2-207ENST00000555357 TDRD9Q8NDG6 1382 aaKnown RBP23.1■■□□□ 1.29
CDK2-207ENST00000555357 WDR97A6NE52 1622 aa23.01■■□□□ 1.27
CDK2-207ENST00000555357 CHD1O14646 1710 aa23.01■■□□□ 1.27
CDK2-207ENST00000555357 WRNQ14191 1432 aaPredicted RBP eCLIP23■■□□□ 1.27
CDK2-207ENST00000555357 FBLN2P98095 1184 aa22.98■■□□□ 1.27
CDK2-207ENST00000555357 SYNJ1O43426 1573 aa22.98■■□□□ 1.27
CDK2-207ENST00000555357 SNAPC4Q5SXM2 1469 aa22.96■■□□□ 1.27
CDK2-207ENST00000555357 TOP2BQ02880 1626 aa22.96■■□□□ 1.27
CDK2-207ENST00000555357 BIVM-ERCC5R4GMW8 1640 aa22.96■■□□□ 1.27
CDK2-207ENST00000555357 ABCA10Q8WWZ4 1543 aa22.92■■□□□ 1.26
CDK2-207ENST00000555357 GRIN2BQ13224 1484 aa22.92■■□□□ 1.26
CDK2-207ENST00000555357 TRIM41Q8WV44 630 aa22.91■■□□□ 1.26
CDK2-207ENST00000555357 PBRM1Q86U86 1689 aa22.9■■□□□ 1.26
CDK2-207ENST00000555357 GAPVD1Q14C86 1478 aa22.9■■□□□ 1.26
CDK2-207ENST00000555357 ABCA5Q8WWZ7 1642 aa22.88■■□□□ 1.25
CDK2-207ENST00000555357 MAGI1Q96QZ7 1491 aaPredicted RBP22.87■■□□□ 1.25
CDK2-207ENST00000555357 RIMBP3CA6NJZ7 1639 aa22.83■■□□□ 1.25
CDK2-207ENST00000555357 RIMBP3BA6NNM3 1639 aa22.83■■□□□ 1.25
CDK2-207ENST00000555357 RIMBP3Q9UFD9 1639 aa22.83■■□□□ 1.25
CDK2-207ENST00000555357 CHMP7Q8WUX9 453 aaPredicted RBP22.83■■□□□ 1.25
CDK2-207ENST00000555357 SYNJ2O15056 1496 aa22.8■■□□□ 1.24
CDK2-207ENST00000555357 ARHGEF11O15085 1522 aa22.78■■□□□ 1.24
CDK2-207ENST00000555357 CLASP1Q7Z460 1538 aa22.7■■□□□ 1.22
CDK2-207ENST00000555357 ADAMTS12P58397 1594 aa22.69■■□□□ 1.22
CDK2-207ENST00000555357 ERICH3Q5RHP9 1530 aa22.65■■□□□ 1.22
CDK2-207ENST00000555357 GRIN2AQ12879 1464 aa22.64■■□□□ 1.21
CDK2-207ENST00000555357 FHAD1B1AJZ9 1412 aa22.62■■□□□ 1.21
CDK2-207ENST00000555357 CYB5RLQ6IPT4 315 aa22.61■■□□□ 1.21
CDK2-207ENST00000555357 ARAP1Q96P48 1450 aa22.6■■□□□ 1.21
CDK2-207ENST00000555357 CEP170Q5SW79 1584 aa22.55■■□□□ 1.2
CDK2-207ENST00000555357 KIF27Q86VH2 1401 aa22.53■■□□□ 1.2
CDK2-207ENST00000555357 NUP160Q12769 1436 aa22.52■■□□□ 1.2
CDK2-207ENST00000555357 IGF1RP08069 1367 aa22.44■■□□□ 1.18
CDK2-207ENST00000555357 ERCC6L2Q5T890 1561 aa22.42■■□□□ 1.18
CDK2-207ENST00000555357 CUL7Q14999 1698 aa22.42■■□□□ 1.18
CDK2-207ENST00000555357 SHROOM2Q13796 1616 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms