Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AL365259.1-204ENST00000606001 2635 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SCN2BO60939 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SCN2BO60939 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SCN2BO60939 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
SCN2BO60939 TBC1D3I-201ENST00000616671 1982 ntTSL 5 BASIC12.41□□□□□ -0.42
SCN2BO60939 AC120024.4-201ENST00000624285 2143 ntBASIC12.41□□□□□ -0.42
SCN2BO60939 CAPN8-201ENST00000366872 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SCN2BO60939 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SCN2BO60939 SLC25A13-202ENST00000416240 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SCN2BO60939 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SCN2BO60939 AC023355.1-202ENST00000612262 4242 ntTSL 5 BASIC12.41□□□□□ -0.42
SCN2BO60939 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SCN2BO60939 P2RX1-201ENST00000225538 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SCN2BO60939 CHD1L-202ENST00000369258 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SCN2BO60939 BBOF1-201ENST00000394009 3106 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
SCN2BO60939 ZNF529-209ENST00000591340 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SCN2BO60939 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SCN2BO60939 ALX1-201ENST00000316824 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SCN2BO60939 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SCN2BO60939 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SCN2BO60939 HLA-DQB2-229ENST00000411527 1059 ntBASIC12.41□□□□□ -0.42
SCN2BO60939 FAM21EP-201ENST00000417804 985 ntBASIC12.41□□□□□ -0.42
SCN2BO60939 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SCN2BO60939 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC12.41□□□□□ -0.42
SCN2BO60939 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC12.41□□□□□ -0.42
SCN2BO60939 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SCN2BO60939 LAMTOR5-203ENST00000474861 1154 ntTSL 2 BASIC12.41□□□□□ -0.42
SCN2BO60939 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC12.41□□□□□ -0.42
SCN2BO60939 CR383656.3-201ENST00000551315 183 ntBASIC12.41□□□□□ -0.42
SCN2BO60939 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC12.41□□□□□ -0.42
SCN2BO60939 RN7SL162P-201ENST00000579233 292 ntBASIC12.41□□□□□ -0.42
SCN2BO60939 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC12.41□□□□□ -0.42
SCN2BO60939 RN7SL470P-201ENST00000583069 259 ntBASIC12.41□□□□□ -0.42
SCN2BO60939 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC12.41□□□□□ -0.42
SCN2BO60939 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC12.41□□□□□ -0.42
SCN2BO60939 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC12.41□□□□□ -0.42
SCN2BO60939 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC12.41□□□□□ -0.42
SCN2BO60939 AC126755.5-201ENST00000622756 267 ntBASIC12.41□□□□□ -0.42
SCN2BO60939 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC12.41□□□□□ -0.42
SCN2BO60939 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC12.41□□□□□ -0.42
SCN2BO60939 ZC3H10-201ENST00000257940 7228 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SCN2BO60939 SPDYE8P-201ENST00000333385 2281 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SCN2BO60939 SPDYE11-201ENST00000340073 2281 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SCN2BO60939 SPDYE9P-203ENST00000575125 2281 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SCN2BO60939 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SCN2BO60939 AC134407.3-201ENST00000624035 2139 ntBASIC12.41□□□□□ -0.42
SCN2BO60939 INTS14-203ENST00000431261 1980 ntTSL 2 BASIC12.41□□□□□ -0.42
SCN2BO60939 POM121L1P-202ENST00000605258 1835 ntBASIC12.41□□□□□ -0.42
SCN2BO60939 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SCN2BO60939 PSMD5-201ENST00000210313 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SCN2BO60939 PRKAG1-201ENST00000316299 1683 ntTSL 2 BASIC12.41□□□□□ -0.42
SCN2BO60939 VOPP1-206ENST00000428097 1671 ntTSL 3 BASIC12.41□□□□□ -0.42
SCN2BO60939 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
SCN2BO60939 MKRN7P-201ENST00000433469 1371 ntBASIC12.41□□□□□ -0.42
SCN2BO60939 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC12.41□□□□□ -0.42
SCN2BO60939 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SCN2BO60939 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SCN2BO60939 CDK20-203ENST00000375871 1907 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SCN2BO60939 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SCN2BO60939 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SCN2BO60939 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC12.41□□□□□ -0.42
SCN2BO60939 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC12.4□□□□□ -0.42
SCN2BO60939 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SCN2BO60939 AC020914.1-201ENST00000396477 1476 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SCN2BO60939 GPATCH2L-212ENST00000557263 1458 ntTSL 2 BASIC12.4□□□□□ -0.42
SCN2BO60939 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SCN2BO60939 MIPEPP1-201ENST00000413533 2027 ntBASIC12.4□□□□□ -0.42
SCN2BO60939 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SCN2BO60939 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SCN2BO60939 OR10N1P-203ENST00000641736 1305 ntBASIC12.4□□□□□ -0.42
SCN2BO60939 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SCN2BO60939 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SCN2BO60939 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SCN2BO60939 LRTM2-201ENST00000299194 3688 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SCN2BO60939 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SCN2BO60939 HS6ST1-201ENST00000259241 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SCN2BO60939 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SCN2BO60939 LINC02202-201ENST00000499583 2664 ntTSL 2 BASIC12.4□□□□□ -0.42
SCN2BO60939 NBPF17P-201ENST00000401087 2119 ntBASIC12.4□□□□□ -0.42
SCN2BO60939 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SCN2BO60939 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SCN2BO60939 NXPE4-201ENST00000375478 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SCN2BO60939 APOBEC3B-203ENST00000402182 1844 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
SCN2BO60939 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SCN2BO60939 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SCN2BO60939 RNA5SP491-201ENST00000362936 118 ntBASIC12.4□□□□□ -0.42
SCN2BO60939 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SCN2BO60939 RHOC-205ENST00000369636 786 ntTSL 2 BASIC12.4□□□□□ -0.42
SCN2BO60939 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
SCN2BO60939 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SCN2BO60939 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC12.4□□□□□ -0.42
SCN2BO60939 ACTG1P19-201ENST00000418987 1116 ntBASIC12.4□□□□□ -0.42
SCN2BO60939 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SCN2BO60939 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
SCN2BO60939 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC12.4□□□□□ -0.42
SCN2BO60939 PGK1P2-201ENST00000431702 1214 ntBASIC12.4□□□□□ -0.42
SCN2BO60939 UBTFL5-201ENST00000443682 1191 ntBASIC12.4□□□□□ -0.42
SCN2BO60939 EEF1DP6-201ENST00000449232 372 ntBASIC12.4□□□□□ -0.42
SCN2BO60939 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC12.4□□□□□ -0.42
SCN2BO60939 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms