RNA–Protein interactions for RNA: ENST00000366872.9

CAPN8-201, Transcript of calpain 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN8, Length 2,427 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-201ENST00000366872 NISCHQ9Y2I1 1504 aa26.2■■□□□ 1.79
CAPN8-201ENST00000366872 CCDC180Q9P1Z9 1646 aa22.45■■□□□ 1.18
CAPN8-201ENST00000366872 ZCCHC6Q5VYS8 1495 aaKnown RBP22.27■■□□□ 1.16
CAPN8-201ENST00000366872 SHROOM4Q9ULL8 1493 aa21.94■■□□□ 1.1
CAPN8-201ENST00000366872 DCAF1Q9Y4B6 1507 aa21.77■■□□□ 1.08
CAPN8-201ENST00000366872 SUPT5HO00267 1087 aaKnown RBP21.65■■□□□ 1.06
CAPN8-201ENST00000366872 CHIC1Q5VXU3 224 aa21.43■■□□□ 1.02
CAPN8-201ENST00000366872 MYO15BQ96JP2 1530 aa21.4■■□□□ 1.02
CAPN8-201ENST00000366872 HRCP23327 699 aa21.23■□□□□ 0.99
CAPN8-201ENST00000366872 ABCC9O60706 1549 aa21.1■□□□□ 0.97
CAPN8-201ENST00000366872 DCAF8L2P0C7V8 631 aa20.97■□□□□ 0.95
CAPN8-201ENST00000366872 PCGF6Q9BYE7 350 aa20.8■□□□□ 0.92
CAPN8-201ENST00000366872 RSF1Q96T23 1441 aaPredicted RBP20.72■□□□□ 0.91
CAPN8-201ENST00000366872 RB1CC1Q8TDY2 1594 aa20.7■□□□□ 0.9
CAPN8-201ENST00000366872 SCRIBQ14160 1630 aa20.65■□□□□ 0.9
CAPN8-201ENST00000366872 TRIM26Q12899 539 aaPredicted RBP20.62■□□□□ 0.89
CAPN8-201ENST00000366872 NACADO15069 1562 aa20.57■□□□□ 0.88
CAPN8-201ENST00000366872 LOC105371045A0A1W2PR82 267 aa20.56■□□□□ 0.88
CAPN8-201ENST00000366872 ZEB1P37275 1124 aaPredicted RBP20.43■□□□□ 0.86
CAPN8-201ENST00000366872 PPARGC1BQ86YN6 1023 aaKnown RBP20.39■□□□□ 0.86
CAPN8-201ENST00000366872 TRIM41Q8WV44 630 aa20.33■□□□□ 0.84
CAPN8-201ENST00000366872 BAZ1AQ9NRL2 1556 aaPredicted RBP20.28■□□□□ 0.84
CAPN8-201ENST00000366872 MROH2BQ7Z745 1585 aa20.26■□□□□ 0.83
CAPN8-201ENST00000366872 EIF4G1Q04637 1599 aaKnown RBP20.26■□□□□ 0.83
CAPN8-201ENST00000366872 CECR2Q9BXF3 1484 aa20.21■□□□□ 0.83
CAPN8-201ENST00000366872 WIZO95785 1651 aa20.19■□□□□ 0.82
CAPN8-201ENST00000366872 TOP2AP11388 1531 aaKnown RBP20.02■□□□□ 0.8
CAPN8-201ENST00000366872 SMARCA4P51532 1647 aa19.94■□□□□ 0.78
CAPN8-201ENST00000366872 WRNQ14191 1432 aaPredicted RBP eCLIP19.93■□□□□ 0.78
CAPN8-201ENST00000366872 FAM9AQ8IZU1 332 aaPredicted RBP19.89■□□□□ 0.77
CAPN8-201ENST00000366872 UNC13AQ9UPW8 1703 aa19.87■□□□□ 0.77
CAPN8-201ENST00000366872 SMARCA2P51531 1590 aa19.87■□□□□ 0.77
CAPN8-201ENST00000366872 EEA1Q15075 1411 aa19.83■□□□□ 0.77
CAPN8-201ENST00000366872 PELP1Q8IZL8 1130 aaKnown RBP19.83■□□□□ 0.77
CAPN8-201ENST00000366872 CCDC88BA6NC98 1476 aa19.78■□□□□ 0.76
CAPN8-201ENST00000366872 TNIKQ9UKE5 1360 aa19.72■□□□□ 0.75
CAPN8-201ENST00000366872 PEG3Q9GZU2 1588 aa19.72■□□□□ 0.75
CAPN8-201ENST00000366872 ABCC8Q09428 1581 aa19.71■□□□□ 0.75
CAPN8-201ENST00000366872 CEP162Q5TB80 1403 aa19.66■□□□□ 0.74
CAPN8-201ENST00000366872 SCAF1Q9H7N4 1312 aaKnown RBP19.57■□□□□ 0.72
CAPN8-201ENST00000366872 GOLGA3Q08378 1498 aa19.57■□□□□ 0.72
CAPN8-201ENST00000366872 KIF21BO75037 1637 aa19.56■□□□□ 0.72
CAPN8-201ENST00000366872 SOGA1O94964 1423 aa19.53■□□□□ 0.72
CAPN8-201ENST00000366872 CCER1Q8TC90 406 aaPredicted RBP19.53■□□□□ 0.72
CAPN8-201ENST00000366872 BICRAQ9NZM4 1560 aa19.52■□□□□ 0.72
CAPN8-201ENST00000366872 CSRNP3Q8WYN3 585 aa19.49■□□□□ 0.71
CAPN8-201ENST00000366872 EHMT2Q96KQ7 1210 aa19.48■□□□□ 0.71
CAPN8-201ENST00000366872 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.47■□□□□ 0.71
CAPN8-201ENST00000366872 CEP164Q9UPV0 1460 aa19.45■□□□□ 0.7
CAPN8-201ENST00000366872 BAZ1BQ9UIG0 1483 aaKnown RBP19.43■□□□□ 0.7
CAPN8-201ENST00000366872 ACIN1Q9UKV3 1341 aaKnown RBP19.42■□□□□ 0.7
CAPN8-201ENST00000366872 RUSC2Q8N2Y8 1516 aa19.4■□□□□ 0.7
CAPN8-201ENST00000366872 SYNJ1O43426 1573 aa19.38■□□□□ 0.69
CAPN8-201ENST00000366872 DIEXFQ68CQ4 756 aaKnown RBP19.35■□□□□ 0.69
CAPN8-201ENST00000366872 CENPBP07199 599 aaPredicted RBP19.32■□□□□ 0.68
CAPN8-201ENST00000366872 VPS8Q8N3P4 1428 aa19.28■□□□□ 0.68
CAPN8-201ENST00000366872 ATAD2BQ9ULI0 1458 aa19.27■□□□□ 0.68
CAPN8-201ENST00000366872 BIVM-ERCC5R4GMW8 1640 aa19.27■□□□□ 0.67
CAPN8-201ENST00000366872 TOP2BQ02880 1626 aa19.26■□□□□ 0.67
CAPN8-201ENST00000366872 UBTFP17480 764 aaKnown RBP19.25■□□□□ 0.67
CAPN8-201ENST00000366872 NEUROD1Q13562 356 aa19.24■□□□□ 0.67
CAPN8-201ENST00000366872 CLIP1P30622 1438 aa19.24■□□□□ 0.67
CAPN8-201ENST00000366872 ZNF316A6NFI3 1004 aaPredicted RBP19.23■□□□□ 0.67
CAPN8-201ENST00000366872 ERICH3Q5RHP9 1530 aa19.21■□□□□ 0.67
CAPN8-201ENST00000366872 CLSPNQ9HAW4 1339 aa19.12■□□□□ 0.65
CAPN8-201ENST00000366872 RAPGEF2Q9Y4G8 1499 aa19.12■□□□□ 0.65
CAPN8-201ENST00000366872 HMGXB3Q12766 1538 aa19.07■□□□□ 0.64
CAPN8-201ENST00000366872 PRXQ9BXM0 1461 aa19.07■□□□□ 0.64
CAPN8-201ENST00000366872 GTF3C3Q9Y5Q9 886 aa19.06■□□□□ 0.64
CAPN8-201ENST00000366872 PABPN1Q86U42 306 aaKnown RBP eCLIP19■□□□□ 0.63
CAPN8-201ENST00000366872 PRDM2Q13029 1718 aa18.99■□□□□ 0.63
CAPN8-201ENST00000366872 MYT1Q01538 1121 aa18.99■□□□□ 0.63
CAPN8-201ENST00000366872 TTBK1Q5TCY1 1321 aaPredicted RBP18.99■□□□□ 0.63
CAPN8-201ENST00000366872 CUX2O14529 1486 aa18.97■□□□□ 0.63
CAPN8-201ENST00000366872 ARAP1Q96P48 1450 aa18.97■□□□□ 0.63
CAPN8-201ENST00000366872 APLP2Q06481 763 aa18.97■□□□□ 0.63
CAPN8-201ENST00000366872 NCAPD3P42695 1498 aa18.95■□□□□ 0.62
CAPN8-201ENST00000366872 RRBP1Q9P2E9 1410 aaKnown RBP18.93■□□□□ 0.62
CAPN8-201ENST00000366872 HNRNPUL2Q1KMD3 747 aaKnown RBP18.89■□□□□ 0.61
CAPN8-201ENST00000366872 CUX1P39880 1505 aa18.88■□□□□ 0.61
CAPN8-201ENST00000366872 DHX57Q6P158 1386 aaKnown RBP18.87■□□□□ 0.61
CAPN8-201ENST00000366872 MAP3K1Q13233 1512 aa18.86■□□□□ 0.61
CAPN8-201ENST00000366872 KIF27Q86VH2 1401 aa18.86■□□□□ 0.61
CAPN8-201ENST00000366872 MIER1Q8N108 512 aa18.84■□□□□ 0.61
CAPN8-201ENST00000366872 CFTRP13569 1480 aa18.83■□□□□ 0.61
CAPN8-201ENST00000366872 ARHGAP35Q9NRY4 1499 aa18.75■□□□□ 0.59
CAPN8-201ENST00000366872 CCNB3Q8WWL7 1395 aa18.7■□□□□ 0.58
CAPN8-201ENST00000366872 TIAM1Q13009 1591 aa18.69■□□□□ 0.58
CAPN8-201ENST00000366872 CFAP43Q8NDM7 1665 aa18.66■□□□□ 0.58
CAPN8-201ENST00000366872 KANK4Q5T7N3 995 aaPredicted RBP18.65■□□□□ 0.58
CAPN8-201ENST00000366872 YTHDC1Q96MU7 727 aaKnown RBP18.63■□□□□ 0.57
CAPN8-201ENST00000366872 MAPKBP1O60336 1514 aa18.59■□□□□ 0.57
CAPN8-201ENST00000366872 IGF1RP08069 1367 aa18.57■□□□□ 0.56
CAPN8-201ENST00000366872 LRRC9Q6ZRR7 1453 aa18.55■□□□□ 0.56
CAPN8-201ENST00000366872 FHAD1B1AJZ9 1412 aa18.54■□□□□ 0.56
CAPN8-201ENST00000366872 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.52■□□□□ 0.56
CAPN8-201ENST00000366872 EFCAB5A4FU69 1503 aa18.51■□□□□ 0.55
CAPN8-201ENST00000366872 SETD5Q9C0A6 1442 aa18.5■□□□□ 0.55
CAPN8-201ENST00000366872 RAB3GAP2Q9H2M9 1393 aa18.5■□□□□ 0.55
CAPN8-201ENST00000366872 TIMELESSQ9UNS1 1208 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms