RNA–Protein interactions for RNA: ENST00000340073.8

SPDYE11-201, Transcript of speedy/RINGO cell cycle regulator family member E11, humanhuman

TSL 1 (best) BASIC

Gene SPDYE11, Length 2,281 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE11-201ENST00000340073 NISCHQ9Y2I1 1504 aa28.43■■■□□ 2.14
SPDYE11-201ENST00000340073 CCDC180Q9P1Z9 1646 aa24.59■■□□□ 1.53
SPDYE11-201ENST00000340073 ZCCHC6Q5VYS8 1495 aaKnown RBP23.96■■□□□ 1.43
SPDYE11-201ENST00000340073 SHROOM4Q9ULL8 1493 aa23.63■■□□□ 1.37
SPDYE11-201ENST00000340073 DCAF8L2P0C7V8 631 aa23.54■■□□□ 1.36
SPDYE11-201ENST00000340073 DCAF1Q9Y4B6 1507 aa23.4■■□□□ 1.34
SPDYE11-201ENST00000340073 ABCC9O60706 1549 aa23.32■■□□□ 1.32
SPDYE11-201ENST00000340073 MYO15BQ96JP2 1530 aa22.97■■□□□ 1.27
SPDYE11-201ENST00000340073 SUPT5HO00267 1087 aaKnown RBP22.86■■□□□ 1.25
SPDYE11-201ENST00000340073 SCRIBQ14160 1630 aa22.82■■□□□ 1.24
SPDYE11-201ENST00000340073 NACADO15069 1562 aa22.82■■□□□ 1.24
SPDYE11-201ENST00000340073 RB1CC1Q8TDY2 1594 aa22.67■■□□□ 1.22
SPDYE11-201ENST00000340073 UNC13AQ9UPW8 1703 aa22.24■■□□□ 1.15
SPDYE11-201ENST00000340073 RSF1Q96T23 1441 aaPredicted RBP22.21■■□□□ 1.15
SPDYE11-201ENST00000340073 CECR2Q9BXF3 1484 aa22.14■■□□□ 1.13
SPDYE11-201ENST00000340073 MROH2BQ7Z745 1585 aa22.04■■□□□ 1.12
SPDYE11-201ENST00000340073 PABPN1Q86U42 306 aaKnown RBP eCLIP21.99■■□□□ 1.11
SPDYE11-201ENST00000340073 BICRAQ9NZM4 1560 aa21.98■■□□□ 1.11
SPDYE11-201ENST00000340073 CHIC1Q5VXU3 224 aa21.96■■□□□ 1.11
SPDYE11-201ENST00000340073 BAZ1AQ9NRL2 1556 aaPredicted RBP21.92■■□□□ 1.1
SPDYE11-201ENST00000340073 WIZO95785 1651 aa21.91■■□□□ 1.1
SPDYE11-201ENST00000340073 SMARCA4P51532 1647 aa21.82■■□□□ 1.08
SPDYE11-201ENST00000340073 TOP2AP11388 1531 aaKnown RBP21.61■■□□□ 1.05
SPDYE11-201ENST00000340073 PEG3Q9GZU2 1588 aa21.46■■□□□ 1.03
SPDYE11-201ENST00000340073 SMARCA2P51531 1590 aa21.45■■□□□ 1.02
SPDYE11-201ENST00000340073 CCDC88BA6NC98 1476 aa21.42■■□□□ 1.02
SPDYE11-201ENST00000340073 EIF4G1Q04637 1599 aaKnown RBP21.4■■□□□ 1.02
SPDYE11-201ENST00000340073 TRIM41Q8WV44 630 aa21.39■■□□□ 1.01
SPDYE11-201ENST00000340073 ATAD2BQ9ULI0 1458 aa21.35■■□□□ 1.01
SPDYE11-201ENST00000340073 BAZ1BQ9UIG0 1483 aaKnown RBP21.28■■□□□ 1
SPDYE11-201ENST00000340073 LOC105371045A0A1W2PR82 267 aa21.22■□□□□ 0.99
SPDYE11-201ENST00000340073 ABCC8Q09428 1581 aa21.16■□□□□ 0.98
SPDYE11-201ENST00000340073 FAM9AQ8IZU1 332 aaPredicted RBP21.12■□□□□ 0.97
SPDYE11-201ENST00000340073 HMGXB3Q12766 1538 aa21.08■□□□□ 0.96
SPDYE11-201ENST00000340073 CC2D2AQ9P2K1 1620 aa21.07■□□□□ 0.96
SPDYE11-201ENST00000340073 NCAPD3P42695 1498 aa21.06■□□□□ 0.96
SPDYE11-201ENST00000340073 EHMT2Q96KQ7 1210 aa20.91■□□□□ 0.94
SPDYE11-201ENST00000340073 WRNQ14191 1432 aaPredicted RBP eCLIP20.91■□□□□ 0.94
SPDYE11-201ENST00000340073 SYNJ1O43426 1573 aa20.85■□□□□ 0.93
SPDYE11-201ENST00000340073 SOGA1O94964 1423 aa20.8■□□□□ 0.92
SPDYE11-201ENST00000340073 RUSC2Q8N2Y8 1516 aa20.72■□□□□ 0.91
SPDYE11-201ENST00000340073 CFTRP13569 1480 aa20.72■□□□□ 0.91
SPDYE11-201ENST00000340073 EEA1Q15075 1411 aa20.69■□□□□ 0.9
SPDYE11-201ENST00000340073 TOP2BQ02880 1626 aa20.68■□□□□ 0.9
SPDYE11-201ENST00000340073 DNAJC5BQ9UF47 199 aa20.66■□□□□ 0.9
SPDYE11-201ENST00000340073 PRDM2Q13029 1718 aa20.66■□□□□ 0.9
SPDYE11-201ENST00000340073 BIVM-ERCC5R4GMW8 1640 aa20.64■□□□□ 0.89
SPDYE11-201ENST00000340073 CSRNP3Q8WYN3 585 aa20.61■□□□□ 0.89
SPDYE11-201ENST00000340073 PCGF6Q9BYE7 350 aa20.61■□□□□ 0.89
SPDYE11-201ENST00000340073 CADPSQ9ULU8 1353 aa20.58■□□□□ 0.88
SPDYE11-201ENST00000340073 CUX1P39880 1505 aa20.57■□□□□ 0.88
SPDYE11-201ENST00000340073 GOLGA3Q08378 1498 aa20.51■□□□□ 0.87
SPDYE11-201ENST00000340073 KIF21BO75037 1637 aa20.47■□□□□ 0.87
SPDYE11-201ENST00000340073 TNIKQ9UKE5 1360 aa20.47■□□□□ 0.87
SPDYE11-201ENST00000340073 CEP162Q5TB80 1403 aa20.46■□□□□ 0.87
SPDYE11-201ENST00000340073 CEP164Q9UPV0 1460 aa20.46■□□□□ 0.87
SPDYE11-201ENST00000340073 UBTFP17480 764 aaKnown RBP20.46■□□□□ 0.87
SPDYE11-201ENST00000340073 NESP48681 1621 aa20.43■□□□□ 0.86
SPDYE11-201ENST00000340073 TRIM26Q12899 539 aaPredicted RBP20.42■□□□□ 0.86
SPDYE11-201ENST00000340073 FANCD2Q9BXW9 1451 aa20.4■□□□□ 0.86
SPDYE11-201ENST00000340073 LAMC3Q9Y6N6 1575 aa20.37■□□□□ 0.85
SPDYE11-201ENST00000340073 RAPGEF2Q9Y4G8 1499 aa20.36■□□□□ 0.85
SPDYE11-201ENST00000340073 KIF27Q86VH2 1401 aa20.32■□□□□ 0.84
SPDYE11-201ENST00000340073 FGD5Q6ZNL6 1462 aa20.31■□□□□ 0.84
SPDYE11-201ENST00000340073 PPARGC1BQ86YN6 1023 aaKnown RBP20.28■□□□□ 0.84
SPDYE11-201ENST00000340073 PRXQ9BXM0 1461 aa20.26■□□□□ 0.83
SPDYE11-201ENST00000340073 DNMBPQ6XZF7 1577 aa20.25■□□□□ 0.83
SPDYE11-201ENST00000340073 ERICH3Q5RHP9 1530 aa20.25■□□□□ 0.83
SPDYE11-201ENST00000340073 CUX2O14529 1486 aa20.25■□□□□ 0.83
SPDYE11-201ENST00000340073 PDS5BQ9NTI5 1447 aa20.23■□□□□ 0.83
SPDYE11-201ENST00000340073 HRCP23327 699 aa20.22■□□□□ 0.83
SPDYE11-201ENST00000340073 TOPBP1Q92547 1522 aa20.21■□□□□ 0.83
SPDYE11-201ENST00000340073 CLIP1P30622 1438 aa20.21■□□□□ 0.83
SPDYE11-201ENST00000340073 KIF21AQ7Z4S6 1674 aa20.17■□□□□ 0.82
SPDYE11-201ENST00000340073 POLA1P09884 1462 aaPredicted RBP20.15■□□□□ 0.82
SPDYE11-201ENST00000340073 RANGAP1P46060 587 aaPredicted RBP20.15■□□□□ 0.82
SPDYE11-201ENST00000340073 URB2Q14146 1524 aaKnown RBP20.14■□□□□ 0.81
SPDYE11-201ENST00000340073 RAD54L2Q9Y4B4 1467 aa20.13■□□□□ 0.81
SPDYE11-201ENST00000340073 IGF1RP08069 1367 aa20.1■□□□□ 0.81
SPDYE11-201ENST00000340073 TTBK1Q5TCY1 1321 aaPredicted RBP20.1■□□□□ 0.81
SPDYE11-201ENST00000340073 ABCA10Q8WWZ4 1543 aa20.08■□□□□ 0.8
SPDYE11-201ENST00000340073 VPS8Q8N3P4 1428 aa20.06■□□□□ 0.8
SPDYE11-201ENST00000340073 CARMIL1Q5VZK9 1371 aa20.02■□□□□ 0.8
SPDYE11-201ENST00000340073 WDR97A6NE52 1622 aa20.01■□□□□ 0.79
SPDYE11-201ENST00000340073 ERCC6Q03468 1493 aa20■□□□□ 0.79
SPDYE11-201ENST00000340073 MRC2Q9UBG0 1479 aa19.98■□□□□ 0.79
SPDYE11-201ENST00000340073 ARAP1Q96P48 1450 aa19.97■□□□□ 0.79
SPDYE11-201ENST00000340073 CUL7Q14999 1698 aa19.92■□□□□ 0.78
SPDYE11-201ENST00000340073 ABCA5Q8WWZ7 1642 aa19.92■□□□□ 0.78
SPDYE11-201ENST00000340073 ARHGAP35Q9NRY4 1499 aa19.9■□□□□ 0.78
SPDYE11-201ENST00000340073 TDRD9Q8NDG6 1382 aaKnown RBP19.9■□□□□ 0.78
SPDYE11-201ENST00000340073 APLP2Q06481 763 aa19.88■□□□□ 0.77
SPDYE11-201ENST00000340073 TARBP1Q13395 1621 aaKnown RBP19.87■□□□□ 0.77
SPDYE11-201ENST00000340073 WDR62O43379 1518 aa19.86■□□□□ 0.77
SPDYE11-201ENST00000340073 GAPVD1Q14C86 1478 aa19.86■□□□□ 0.77
SPDYE11-201ENST00000340073 THOC2Q8NI27 1593 aaKnown RBP19.84■□□□□ 0.77
SPDYE11-201ENST00000340073 CTTNBP2Q8WZ74 1663 aa19.79■□□□□ 0.76
SPDYE11-201ENST00000340073 PBRM1Q86U86 1689 aa19.76■□□□□ 0.75
SPDYE11-201ENST00000340073 AQRO60306 1485 aaKnown RBP eCLIP19.71■□□□□ 0.75
SPDYE11-201ENST00000340073 IFT140Q96RY7 1462 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms