RNA–Protein interactions for RNA: ENST00000370793.5

USP33-203, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 1 (best) BASIC

Gene USP33, Length 4,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-203ENST00000370793 NISCHQ9Y2I1 1504 aa23.89■■□□□ 1.41
USP33-203ENST00000370793 DCAF8L2P0C7V8 631 aa22.44■■□□□ 1.18
USP33-203ENST00000370793 SUPT5HO00267 1087 aaKnown RBP21.94■■□□□ 1.1
USP33-203ENST00000370793 SHROOM4Q9ULL8 1493 aa21.85■■□□□ 1.09
USP33-203ENST00000370793 EHMT2Q96KQ7 1210 aa20.62■□□□□ 0.89
USP33-203ENST00000370793 PCGF6Q9BYE7 350 aa20.59■□□□□ 0.89
USP33-203ENST00000370793 FAM9AQ8IZU1 332 aaPredicted RBP20.49■□□□□ 0.87
USP33-203ENST00000370793 TRIM41Q8WV44 630 aa20.41■□□□□ 0.86
USP33-203ENST00000370793 CHIC1Q5VXU3 224 aa20.33■□□□□ 0.84
USP33-203ENST00000370793 ZEB1P37275 1124 aaPredicted RBP20.15■□□□□ 0.82
USP33-203ENST00000370793 APLP2Q06481 763 aa20.11■□□□□ 0.81
USP33-203ENST00000370793 HRCP23327 699 aa20.04■□□□□ 0.8
USP33-203ENST00000370793 TRIM26Q12899 539 aaPredicted RBP19.99■□□□□ 0.79
USP33-203ENST00000370793 LOC105371045A0A1W2PR82 267 aa19.99■□□□□ 0.79
USP33-203ENST00000370793 ZCCHC6Q5VYS8 1495 aaKnown RBP19.97■□□□□ 0.79
USP33-203ENST00000370793 TTBK1Q5TCY1 1321 aaPredicted RBP19.97■□□□□ 0.79
USP33-203ENST00000370793 CCER1Q8TC90 406 aaPredicted RBP19.87■□□□□ 0.77
USP33-203ENST00000370793 UBTFP17480 764 aaKnown RBP19.84■□□□□ 0.77
USP33-203ENST00000370793 CCDC180Q9P1Z9 1646 aa19.81■□□□□ 0.76
USP33-203ENST00000370793 RANGAP1P46060 587 aaPredicted RBP19.69■□□□□ 0.74
USP33-203ENST00000370793 PPARGC1BQ86YN6 1023 aaKnown RBP19.69■□□□□ 0.74
USP33-203ENST00000370793 ABCC9O60706 1549 aa19.66■□□□□ 0.74
USP33-203ENST00000370793 CENPBP07199 599 aaPredicted RBP19.62■□□□□ 0.73
USP33-203ENST00000370793 PELP1Q8IZL8 1130 aaKnown RBP19.58■□□□□ 0.72
USP33-203ENST00000370793 SCRIBQ14160 1630 aa19.35■□□□□ 0.69
USP33-203ENST00000370793 ATP1B4Q9UN42 357 aaPredicted RBP19.32■□□□□ 0.68
USP33-203ENST00000370793 DCAF1Q9Y4B6 1507 aa19.3■□□□□ 0.68
USP33-203ENST00000370793 PABPN1Q86U42 306 aaKnown RBP eCLIP19.26■□□□□ 0.67
USP33-203ENST00000370793 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.24■□□□□ 0.67
USP33-203ENST00000370793 HNRNPUL2Q1KMD3 747 aaKnown RBP19.21■□□□□ 0.67
USP33-203ENST00000370793 MYO15BQ96JP2 1530 aa19.2■□□□□ 0.66
USP33-203ENST00000370793 YTHDC1Q96MU7 727 aaKnown RBP19.18■□□□□ 0.66
USP33-203ENST00000370793 RSF1Q96T23 1441 aaPredicted RBP19.08■□□□□ 0.65
USP33-203ENST00000370793 CSRNP3Q8WYN3 585 aa19.05■□□□□ 0.64
USP33-203ENST00000370793 DIEXFQ68CQ4 756 aaKnown RBP19.04■□□□□ 0.64
USP33-203ENST00000370793 ITGAEP38570 1179 aa19.03■□□□□ 0.64
USP33-203ENST00000370793 NACADO15069 1562 aa18.9■□□□□ 0.62
USP33-203ENST00000370793 NEFLP07196 543 aa18.87■□□□□ 0.61
USP33-203ENST00000370793 RB1CC1Q8TDY2 1594 aa18.83■□□□□ 0.6
USP33-203ENST00000370793 ZNF316A6NFI3 1004 aaPredicted RBP18.75■□□□□ 0.59
USP33-203ENST00000370793 FAM50AQ14320 339 aaKnown RBP18.7■□□□□ 0.58
USP33-203ENST00000370793 MYT1Q01538 1121 aa18.69■□□□□ 0.58
USP33-203ENST00000370793 CECR2Q9BXF3 1484 aa18.67■□□□□ 0.58
USP33-203ENST00000370793 EEA1Q15075 1411 aa18.65■□□□□ 0.58
USP33-203ENST00000370793 ERICH6Q7L0X2 663 aa18.62■□□□□ 0.57
USP33-203ENST00000370793 BAZ1AQ9NRL2 1556 aaPredicted RBP18.62■□□□□ 0.57
USP33-203ENST00000370793 GTF3C3Q9Y5Q9 886 aa18.62■□□□□ 0.57
USP33-203ENST00000370793 ACIN1Q9UKV3 1341 aaKnown RBP18.6■□□□□ 0.57
USP33-203ENST00000370793 CEP162Q5TB80 1403 aa18.56■□□□□ 0.56
USP33-203ENST00000370793 NEUROD1Q13562 356 aa18.52■□□□□ 0.56
USP33-203ENST00000370793 GOLGA3Q08378 1498 aa18.52■□□□□ 0.55
USP33-203ENST00000370793 MROH2BQ7Z745 1585 aa18.51■□□□□ 0.55
USP33-203ENST00000370793 CLIP1P30622 1438 aa18.51■□□□□ 0.55
USP33-203ENST00000370793 WRNQ14191 1432 aaPredicted RBP eCLIP18.5■□□□□ 0.55
USP33-203ENST00000370793 TNIKQ9UKE5 1360 aa18.5■□□□□ 0.55
USP33-203ENST00000370793 P3H3Q8IVL6 736 aa18.45■□□□□ 0.54
USP33-203ENST00000370793 TRIM52Q96A61 297 aa18.41■□□□□ 0.54
USP33-203ENST00000370793 POLR3GLQ9BT43 218 aa18.41■□□□□ 0.54
USP33-203ENST00000370793 BAZ1BQ9UIG0 1483 aaKnown RBP18.39■□□□□ 0.53
USP33-203ENST00000370793 CEP164Q9UPV0 1460 aa18.37■□□□□ 0.53
USP33-203ENST00000370793 ANP32CO43423 234 aa18.33■□□□□ 0.53
USP33-203ENST00000370793 CCDC88BA6NC98 1476 aa18.31■□□□□ 0.52
USP33-203ENST00000370793 SOGA1O94964 1423 aa18.3■□□□□ 0.52
USP33-203ENST00000370793 WIZO95785 1651 aa18.27■□□□□ 0.51
USP33-203ENST00000370793 SCAF1Q9H7N4 1312 aaKnown RBP18.24■□□□□ 0.51
USP33-203ENST00000370793 CNGB1Q14028 1251 aaPredicted RBP18.24■□□□□ 0.51
USP33-203ENST00000370793 ABCC8Q09428 1581 aa18.23■□□□□ 0.51
USP33-203ENST00000370793 TOP2AP11388 1531 aaKnown RBP18.21■□□□□ 0.51
USP33-203ENST00000370793 KIF27Q86VH2 1401 aa18.21■□□□□ 0.51
USP33-203ENST00000370793 CLSPNQ9HAW4 1339 aa18.19■□□□□ 0.5
USP33-203ENST00000370793 MIER1Q8N108 512 aa18.17■□□□□ 0.5
USP33-203ENST00000370793 BCANQ96GW7 911 aa18.16■□□□□ 0.5
USP33-203ENST00000370793 MYT1LQ9UL68 1186 aa18.16■□□□□ 0.5
USP33-203ENST00000370793 TONSLQ96HA7 1378 aa18.15■□□□□ 0.5
USP33-203ENST00000370793 ARID3CA6NKF2 412 aa18.12■□□□□ 0.49
USP33-203ENST00000370793 FBLN2P98095 1184 aa18.1■□□□□ 0.49
USP33-203ENST00000370793 CDK11AQ9UQ88 783 aaPredicted RBP18.1■□□□□ 0.49
USP33-203ENST00000370793 VPS8Q8N3P4 1428 aa18.08■□□□□ 0.48
USP33-203ENST00000370793 DDX10Q13206 875 aaKnown RBP18.08■□□□□ 0.48
USP33-203ENST00000370793 ZNF326Q5BKZ1 582 aaKnown RBP18.08■□□□□ 0.48
USP33-203ENST00000370793 MTUS2Q5JR59 1369 aa18.07■□□□□ 0.48
USP33-203ENST00000370793 SMARCA2P51531 1590 aa18.05■□□□□ 0.48
USP33-203ENST00000370793 SMARCA4P51532 1647 aa18.04■□□□□ 0.48
USP33-203ENST00000370793 ZNF777Q9ULD5 760 aaPredicted RBP17.97■□□□□ 0.47
USP33-203ENST00000370793 CHIC2Q9UKJ5 165 aa17.95■□□□□ 0.46
USP33-203ENST00000370793 CCNB3Q8WWL7 1395 aa17.94■□□□□ 0.46
USP33-203ENST00000370793 FKBP8Q14318 412 aa17.92■□□□□ 0.46
USP33-203ENST00000370793 CUX2O14529 1486 aa17.91■□□□□ 0.46
USP33-203ENST00000370793 DAXXQ9UER7 740 aaPredicted RBP17.91■□□□□ 0.46
USP33-203ENST00000370793 CARMIL1Q5VZK9 1371 aa17.91■□□□□ 0.46
USP33-203ENST00000370793 ATAD2BQ9ULI0 1458 aa17.9■□□□□ 0.46
USP33-203ENST00000370793 FHAD1B1AJZ9 1412 aa17.89■□□□□ 0.45
USP33-203ENST00000370793 HNRNPUQ00839 825 aaKnown RBP eCLIP17.87■□□□□ 0.45
USP33-203ENST00000370793 RUSC2Q8N2Y8 1516 aa17.87■□□□□ 0.45
USP33-203ENST00000370793 KANK4Q5T7N3 995 aaPredicted RBP17.84■□□□□ 0.45
USP33-203ENST00000370793 HIRIP3Q9BW71 556 aaPredicted RBP17.83■□□□□ 0.44
USP33-203ENST00000370793 RAPGEF2Q9Y4G8 1499 aa17.82■□□□□ 0.44
USP33-203ENST00000370793 RRP7BPQ9NSQ0 103 aa17.81■□□□□ 0.44
USP33-203ENST00000370793 SLC4A1APQ9BWU0 796 aaKnown RBP17.79■□□□□ 0.44
USP33-203ENST00000370793 EIF4G2P78344 907 aaKnown RBP eCLIP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms