RNA–Protein interactions for RNA: ENST00000557263.5

GPATCH2L-212, Transcript of G-patch domain containing 2 like, humanhuman

TSL 2 BASIC

Gene GPATCH2L, Length 1,458 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH2L-212ENST00000557263 NISCHQ9Y2I1 1504 aa28.32■■■□□ 2.12
GPATCH2L-212ENST00000557263 CCDC180Q9P1Z9 1646 aa24.67■■□□□ 1.54
GPATCH2L-212ENST00000557263 ZCCHC6Q5VYS8 1495 aaKnown RBP23.88■■□□□ 1.41
GPATCH2L-212ENST00000557263 DCAF1Q9Y4B6 1507 aa23.44■■□□□ 1.34
GPATCH2L-212ENST00000557263 SHROOM4Q9ULL8 1493 aa23.34■■□□□ 1.33
GPATCH2L-212ENST00000557263 DCAF8L2P0C7V8 631 aa23.22■■□□□ 1.31
GPATCH2L-212ENST00000557263 MYO15BQ96JP2 1530 aa23.03■■□□□ 1.28
GPATCH2L-212ENST00000557263 ABCC9O60706 1549 aa22.84■■□□□ 1.25
GPATCH2L-212ENST00000557263 NACADO15069 1562 aa22.81■■□□□ 1.24
GPATCH2L-212ENST00000557263 SCRIBQ14160 1630 aa22.67■■□□□ 1.22
GPATCH2L-212ENST00000557263 SUPT5HO00267 1087 aaKnown RBP22.62■■□□□ 1.21
GPATCH2L-212ENST00000557263 RB1CC1Q8TDY2 1594 aa22.55■■□□□ 1.2
GPATCH2L-212ENST00000557263 UNC13AQ9UPW8 1703 aa22.14■■□□□ 1.14
GPATCH2L-212ENST00000557263 RSF1Q96T23 1441 aaPredicted RBP22.06■■□□□ 1.12
GPATCH2L-212ENST00000557263 CECR2Q9BXF3 1484 aa21.9■■□□□ 1.1
GPATCH2L-212ENST00000557263 BAZ1AQ9NRL2 1556 aaPredicted RBP21.9■■□□□ 1.1
GPATCH2L-212ENST00000557263 MROH2BQ7Z745 1585 aa21.87■■□□□ 1.09
GPATCH2L-212ENST00000557263 CHIC1Q5VXU3 224 aa21.82■■□□□ 1.08
GPATCH2L-212ENST00000557263 WIZO95785 1651 aa21.77■■□□□ 1.08
GPATCH2L-212ENST00000557263 BICRAQ9NZM4 1560 aa21.76■■□□□ 1.07
GPATCH2L-212ENST00000557263 SMARCA4P51532 1647 aa21.75■■□□□ 1.07
GPATCH2L-212ENST00000557263 TOP2AP11388 1531 aaKnown RBP21.58■■□□□ 1.05
GPATCH2L-212ENST00000557263 PABPN1Q86U42 306 aaKnown RBP eCLIP21.53■■□□□ 1.04
GPATCH2L-212ENST00000557263 PEG3Q9GZU2 1588 aa21.43■■□□□ 1.02
GPATCH2L-212ENST00000557263 SMARCA2P51531 1590 aa21.36■■□□□ 1.01
GPATCH2L-212ENST00000557263 EIF4G1Q04637 1599 aaKnown RBP21.34■■□□□ 1.01
GPATCH2L-212ENST00000557263 CCDC88BA6NC98 1476 aa21.28■■□□□ 1
GPATCH2L-212ENST00000557263 TRIM41Q8WV44 630 aa21.27■■□□□ 1
GPATCH2L-212ENST00000557263 ATAD2BQ9ULI0 1458 aa21.21■□□□□ 0.99
GPATCH2L-212ENST00000557263 BAZ1BQ9UIG0 1483 aaKnown RBP21.19■□□□□ 0.98
GPATCH2L-212ENST00000557263 HMGXB3Q12766 1538 aa21.06■□□□□ 0.96
GPATCH2L-212ENST00000557263 ABCC8Q09428 1581 aa20.99■□□□□ 0.95
GPATCH2L-212ENST00000557263 LOC105371045A0A1W2PR82 267 aa20.96■□□□□ 0.95
GPATCH2L-212ENST00000557263 NCAPD3P42695 1498 aa20.95■□□□□ 0.94
GPATCH2L-212ENST00000557263 FAM9AQ8IZU1 332 aaPredicted RBP20.87■□□□□ 0.93
GPATCH2L-212ENST00000557263 WRNQ14191 1432 aaPredicted RBP eCLIP20.81■□□□□ 0.92
GPATCH2L-212ENST00000557263 EEA1Q15075 1411 aa20.78■□□□□ 0.92
GPATCH2L-212ENST00000557263 PRDM2Q13029 1718 aa20.77■□□□□ 0.92
GPATCH2L-212ENST00000557263 SYNJ1O43426 1573 aa20.73■□□□□ 0.91
GPATCH2L-212ENST00000557263 CC2D2AQ9P2K1 1620 aa20.73■□□□□ 0.91
GPATCH2L-212ENST00000557263 BIVM-ERCC5R4GMW8 1640 aa20.66■□□□□ 0.9
GPATCH2L-212ENST00000557263 TOP2BQ02880 1626 aa20.65■□□□□ 0.9
GPATCH2L-212ENST00000557263 CFTRP13569 1480 aa20.61■□□□□ 0.89
GPATCH2L-212ENST00000557263 SOGA1O94964 1423 aa20.6■□□□□ 0.89
GPATCH2L-212ENST00000557263 EHMT2Q96KQ7 1210 aa20.56■□□□□ 0.88
GPATCH2L-212ENST00000557263 CSRNP3Q8WYN3 585 aa20.51■□□□□ 0.87
GPATCH2L-212ENST00000557263 KIF21BO75037 1637 aa20.51■□□□□ 0.87
GPATCH2L-212ENST00000557263 GOLGA3Q08378 1498 aa20.5■□□□□ 0.87
GPATCH2L-212ENST00000557263 RUSC2Q8N2Y8 1516 aa20.49■□□□□ 0.87
GPATCH2L-212ENST00000557263 PCGF6Q9BYE7 350 aa20.48■□□□□ 0.87
GPATCH2L-212ENST00000557263 CEP164Q9UPV0 1460 aa20.46■□□□□ 0.87
GPATCH2L-212ENST00000557263 TNIKQ9UKE5 1360 aa20.45■□□□□ 0.86
GPATCH2L-212ENST00000557263 CADPSQ9ULU8 1353 aa20.45■□□□□ 0.86
GPATCH2L-212ENST00000557263 CUX1P39880 1505 aa20.45■□□□□ 0.86
GPATCH2L-212ENST00000557263 TRIM26Q12899 539 aaPredicted RBP20.43■□□□□ 0.86
GPATCH2L-212ENST00000557263 CEP162Q5TB80 1403 aa20.38■□□□□ 0.85
GPATCH2L-212ENST00000557263 UBTFP17480 764 aaKnown RBP20.33■□□□□ 0.85
GPATCH2L-212ENST00000557263 ERICH3Q5RHP9 1530 aa20.29■□□□□ 0.84
GPATCH2L-212ENST00000557263 LAMC3Q9Y6N6 1575 aa20.29■□□□□ 0.84
GPATCH2L-212ENST00000557263 KIF27Q86VH2 1401 aa20.28■□□□□ 0.84
GPATCH2L-212ENST00000557263 FANCD2Q9BXW9 1451 aa20.27■□□□□ 0.84
GPATCH2L-212ENST00000557263 DNMBPQ6XZF7 1577 aa20.22■□□□□ 0.83
GPATCH2L-212ENST00000557263 HRCP23327 699 aa20.22■□□□□ 0.83
GPATCH2L-212ENST00000557263 RAPGEF2Q9Y4G8 1499 aa20.21■□□□□ 0.83
GPATCH2L-212ENST00000557263 FGD5Q6ZNL6 1462 aa20.18■□□□□ 0.82
GPATCH2L-212ENST00000557263 PRXQ9BXM0 1461 aa20.17■□□□□ 0.82
GPATCH2L-212ENST00000557263 CLIP1P30622 1438 aa20.15■□□□□ 0.82
GPATCH2L-212ENST00000557263 NESP48681 1621 aa20.14■□□□□ 0.81
GPATCH2L-212ENST00000557263 CUX2O14529 1486 aa20.12■□□□□ 0.81
GPATCH2L-212ENST00000557263 TOPBP1Q92547 1522 aa20.1■□□□□ 0.81
GPATCH2L-212ENST00000557263 PDS5BQ9NTI5 1447 aa20.08■□□□□ 0.8
GPATCH2L-212ENST00000557263 KIF21AQ7Z4S6 1674 aa20.04■□□□□ 0.8
GPATCH2L-212ENST00000557263 VPS8Q8N3P4 1428 aa20.03■□□□□ 0.8
GPATCH2L-212ENST00000557263 ABCA10Q8WWZ4 1543 aa20.01■□□□□ 0.79
GPATCH2L-212ENST00000557263 POLA1P09884 1462 aaPredicted RBP20.01■□□□□ 0.79
GPATCH2L-212ENST00000557263 WDR97A6NE52 1622 aa20■□□□□ 0.79
GPATCH2L-212ENST00000557263 PPARGC1BQ86YN6 1023 aaKnown RBP19.98■□□□□ 0.79
GPATCH2L-212ENST00000557263 CUL7Q14999 1698 aa19.98■□□□□ 0.79
GPATCH2L-212ENST00000557263 URB2Q14146 1524 aaKnown RBP19.97■□□□□ 0.79
GPATCH2L-212ENST00000557263 IGF1RP08069 1367 aa19.94■□□□□ 0.78
GPATCH2L-212ENST00000557263 CARMIL1Q5VZK9 1371 aa19.92■□□□□ 0.78
GPATCH2L-212ENST00000557263 RAD54L2Q9Y4B4 1467 aa19.91■□□□□ 0.78
GPATCH2L-212ENST00000557263 APLP2Q06481 763 aa19.91■□□□□ 0.78
GPATCH2L-212ENST00000557263 ZEB1P37275 1124 aaPredicted RBP19.9■□□□□ 0.78
GPATCH2L-212ENST00000557263 ARAP1Q96P48 1450 aa19.88■□□□□ 0.77
GPATCH2L-212ENST00000557263 ABCA5Q8WWZ7 1642 aa19.87■□□□□ 0.77
GPATCH2L-212ENST00000557263 RANGAP1P46060 587 aaPredicted RBP19.86■□□□□ 0.77
GPATCH2L-212ENST00000557263 CTTNBP2Q8WZ74 1663 aa19.84■□□□□ 0.77
GPATCH2L-212ENST00000557263 MRC2Q9UBG0 1479 aa19.82■□□□□ 0.76
GPATCH2L-212ENST00000557263 TTBK1Q5TCY1 1321 aaPredicted RBP19.8■□□□□ 0.76
GPATCH2L-212ENST00000557263 DNAJC5BQ9UF47 199 aa19.8■□□□□ 0.76
GPATCH2L-212ENST00000557263 ARHGAP35Q9NRY4 1499 aa19.79■□□□□ 0.76
GPATCH2L-212ENST00000557263 TARBP1Q13395 1621 aaKnown RBP19.78■□□□□ 0.76
GPATCH2L-212ENST00000557263 GAPVD1Q14C86 1478 aa19.76■□□□□ 0.75
GPATCH2L-212ENST00000557263 PBRM1Q86U86 1689 aa19.75■□□□□ 0.75
GPATCH2L-212ENST00000557263 EFCAB5A4FU69 1503 aa19.72■□□□□ 0.75
GPATCH2L-212ENST00000557263 WDR62O43379 1518 aa19.69■□□□□ 0.74
GPATCH2L-212ENST00000557263 TDRD9Q8NDG6 1382 aaKnown RBP19.66■□□□□ 0.74
GPATCH2L-212ENST00000557263 FHAD1B1AJZ9 1412 aa19.66■□□□□ 0.74
GPATCH2L-212ENST00000557263 MAP3K1Q13233 1512 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms