RNA–Protein interactions for RNA: ENST00000296088.11

SNRK-201, Transcript of SNF related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRK, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRK-201ENST00000296088 PELP1Q8IZL8 1130 aaKnown RBP20.71■□□□□ 0.91
SNRK-201ENST00000296088 DCAF8L2P0C7V8 631 aa19.98■□□□□ 0.79
SNRK-201ENST00000296088 MYT1Q01538 1121 aa19.95■□□□□ 0.78
SNRK-201ENST00000296088 CCER1Q8TC90 406 aaPredicted RBP19.71■□□□□ 0.75
SNRK-201ENST00000296088 ERICH6Q7L0X2 663 aa19.59■□□□□ 0.73
SNRK-201ENST00000296088 CENPBP07199 599 aaPredicted RBP19.4■□□□□ 0.7
SNRK-201ENST00000296088 SUPT5HO00267 1087 aaKnown RBP19.3■□□□□ 0.68
SNRK-201ENST00000296088 APLP2Q06481 763 aa19.25■□□□□ 0.67
SNRK-201ENST00000296088 ZEB1P37275 1124 aaPredicted RBP19.15■□□□□ 0.66
SNRK-201ENST00000296088 FAM9AQ8IZU1 332 aaPredicted RBP19■□□□□ 0.63
SNRK-201ENST00000296088 NEFLP07196 543 aa18.96■□□□□ 0.63
SNRK-201ENST00000296088 YTHDC1Q96MU7 727 aaKnown RBP18.95■□□□□ 0.62
SNRK-201ENST00000296088 PCGF6Q9BYE7 350 aa18.62■□□□□ 0.57
SNRK-201ENST00000296088 DAXXQ9UER7 740 aaPredicted RBP18.6■□□□□ 0.57
SNRK-201ENST00000296088 EHMT2Q96KQ7 1210 aa18.6■□□□□ 0.57
SNRK-201ENST00000296088 TTBK1Q5TCY1 1321 aaPredicted RBP18.58■□□□□ 0.56
SNRK-201ENST00000296088 NISCHQ9Y2I1 1504 aa18.57■□□□□ 0.56
SNRK-201ENST00000296088 SHROOM4Q9ULL8 1493 aa18.4■□□□□ 0.54
SNRK-201ENST00000296088 RTL5Q5HYW3 569 aaPredicted RBP18.27■□□□□ 0.52
SNRK-201ENST00000296088 HRCP23327 699 aa18.08■□□□□ 0.48
SNRK-201ENST00000296088 ZNF316A6NFI3 1004 aaPredicted RBP18.06■□□□□ 0.48
SNRK-201ENST00000296088 TRIM41Q8WV44 630 aa18.04■□□□□ 0.48
SNRK-201ENST00000296088 ATP1B4Q9UN42 357 aaPredicted RBP17.94■□□□□ 0.46
SNRK-201ENST00000296088 TRIM26Q12899 539 aaPredicted RBP17.94■□□□□ 0.46
SNRK-201ENST00000296088 UBTFP17480 764 aaKnown RBP17.93■□□□□ 0.46
SNRK-201ENST00000296088 CLSPNQ9HAW4 1339 aa17.81■□□□□ 0.44
SNRK-201ENST00000296088 RANGAP1P46060 587 aaPredicted RBP17.8■□□□□ 0.44
SNRK-201ENST00000296088 PPARGC1BQ86YN6 1023 aaKnown RBP17.7■□□□□ 0.42
SNRK-201ENST00000296088 GLIPR1L2Q4G1C9 344 aa17.69■□□□□ 0.42
SNRK-201ENST00000296088 CDK11AQ9UQ88 783 aaPredicted RBP17.6■□□□□ 0.41
SNRK-201ENST00000296088 POLR3GLQ9BT43 218 aa17.59■□□□□ 0.41
SNRK-201ENST00000296088 MYT1LQ9UL68 1186 aa17.59■□□□□ 0.41
SNRK-201ENST00000296088 ZBTB47Q9UFB7 747 aaPredicted RBP17.53■□□□□ 0.4
SNRK-201ENST00000296088 DIEXFQ68CQ4 756 aaKnown RBP17.52■□□□□ 0.39
SNRK-201ENST00000296088 ANP32BQ92688 251 aaKnown RBP17.46■□□□□ 0.38
SNRK-201ENST00000296088 ANP32AP39687 249 aaKnown RBP17.4■□□□□ 0.38
SNRK-201ENST00000296088 ITGAEP38570 1179 aa17.32■□□□□ 0.36
SNRK-201ENST00000296088 EIF5BO60841 1220 aaKnown RBP17.31■□□□□ 0.36
SNRK-201ENST00000296088 GTF3C3Q9Y5Q9 886 aa17.3■□□□□ 0.36
SNRK-201ENST00000296088 ANP32CO43423 234 aa17.29■□□□□ 0.36
SNRK-201ENST00000296088 SLC4A1APQ9BWU0 796 aaKnown RBP17.29■□□□□ 0.36
SNRK-201ENST00000296088 CHIC1Q5VXU3 224 aa17.28■□□□□ 0.36
SNRK-201ENST00000296088 HNRNPUL2Q1KMD3 747 aaKnown RBP17.27■□□□□ 0.36
SNRK-201ENST00000296088 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.26■□□□□ 0.35
SNRK-201ENST00000296088 LOC105371045A0A1W2PR82 267 aa17.26■□□□□ 0.35
SNRK-201ENST00000296088 CNGB1Q14028 1251 aaPredicted RBP17.19■□□□□ 0.34
SNRK-201ENST00000296088 NEFMP07197 916 aa17.16■□□□□ 0.34
SNRK-201ENST00000296088 CANXP27824 592 aaKnown RBP17.16■□□□□ 0.34
SNRK-201ENST00000296088 BCANQ96GW7 911 aa17.15■□□□□ 0.34
SNRK-201ENST00000296088 UPF2Q9HAU5 1272 aaKnown RBP17.1■□□□□ 0.33
SNRK-201ENST00000296088 ACIN1Q9UKV3 1341 aaKnown RBP17.08■□□□□ 0.33
SNRK-201ENST00000296088 HSP90AA1P07900 732 aaKnown RBP17.03■□□□□ 0.32
SNRK-201ENST00000296088 TNNT2P45379 298 aaPredicted RBP17.01■□□□□ 0.31
SNRK-201ENST00000296088 TRIM52Q96A61 297 aa16.98■□□□□ 0.31
SNRK-201ENST00000296088 ANP32EQ9BTT0 268 aa16.98■□□□□ 0.31
SNRK-201ENST00000296088 FAM50AQ14320 339 aaKnown RBP16.92■□□□□ 0.3
SNRK-201ENST00000296088 NPM2Q86SE8 214 aaKnown RBP16.9■□□□□ 0.3
SNRK-201ENST00000296088 NEUROD1Q13562 356 aa16.86■□□□□ 0.29
SNRK-201ENST00000296088 SCAF1Q9H7N4 1312 aaKnown RBP16.84■□□□□ 0.29
SNRK-201ENST00000296088 CDK11BP21127 795 aaKnown RBP16.83■□□□□ 0.29
SNRK-201ENST00000296088 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.81■□□□□ 0.28
SNRK-201ENST00000296088 TRIM44Q96DX7 344 aaPredicted RBP16.81■□□□□ 0.28
SNRK-201ENST00000296088 FKBP8Q14318 412 aa16.75■□□□□ 0.27
SNRK-201ENST00000296088 DDRGK1Q96HY6 314 aa16.74■□□□□ 0.27
SNRK-201ENST00000296088 SLC24A1O60721 1099 aa16.74■□□□□ 0.27
SNRK-201ENST00000296088 ZNF326Q5BKZ1 582 aaKnown RBP16.73■□□□□ 0.27
SNRK-201ENST00000296088 ERICH6BQ5W0A0 696 aa16.72■□□□□ 0.27
SNRK-201ENST00000296088 GOLGA6L22H0YM25 854 aa16.68■□□□□ 0.26
SNRK-201ENST00000296088 BECN1Q14457 450 aa16.68■□□□□ 0.26
SNRK-201ENST00000296088 NCLP19338 710 aaKnown RBP16.68■□□□□ 0.26
SNRK-201ENST00000296088 CCDC136Q96JN2 1154 aa16.67■□□□□ 0.26
SNRK-201ENST00000296088 BCL11AQ9H165 835 aa16.67■□□□□ 0.26
SNRK-201ENST00000296088 NBR1Q14596 966 aa16.62■□□□□ 0.25
SNRK-201ENST00000296088 PPM1GO15355 546 aaPredicted RBP16.58■□□□□ 0.24
SNRK-201ENST00000296088 HNRNPUQ00839 825 aaKnown RBP eCLIP16.58■□□□□ 0.24
SNRK-201ENST00000296088 MYH16Q9H6N6 1097 aa16.54■□□□□ 0.24
SNRK-201ENST00000296088 PTMAP06454 111 aaKnown RBP16.5■□□□□ 0.23
SNRK-201ENST00000296088 ZRSR1Q15695 479 aaKnown RBP16.5■□□□□ 0.23
SNRK-201ENST00000296088 TONSLQ96HA7 1378 aa16.49■□□□□ 0.23
SNRK-201ENST00000296088 DCAF1Q9Y4B6 1507 aa16.46■□□□□ 0.23
SNRK-201ENST00000296088 DNTTIP2Q5QJE6 756 aaKnown RBP16.45■□□□□ 0.22
SNRK-201ENST00000296088 NRDCO43847 1150 aa16.45■□□□□ 0.22
SNRK-201ENST00000296088 TMC1Q8TDI8 760 aa16.44■□□□□ 0.22
SNRK-201ENST00000296088 ARXQ96QS3 562 aa16.44■□□□□ 0.22
SNRK-201ENST00000296088 GOLGA6L6A8MZA4 724 aa16.44■□□□□ 0.22
SNRK-201ENST00000296088 WDR43Q15061 677 aaKnown RBP eCLIP16.42■□□□□ 0.22
SNRK-201ENST00000296088 NAP1L5Q96NT1 182 aaPredicted RBP16.41■□□□□ 0.22
SNRK-201ENST00000296088 FAM9BQ8IZU0 186 aa16.4■□□□□ 0.22
SNRK-201ENST00000296088 CHAF1AQ13111 956 aaPredicted RBP16.35■□□□□ 0.21
SNRK-201ENST00000296088 L1TD1Q5T7N2 865 aaKnown RBP16.35■□□□□ 0.21
SNRK-201ENST00000296088 CASC1Q6TDU7 716 aa16.35■□□□□ 0.21
SNRK-201ENST00000296088 MRS2Q9HD23 443 aa16.31■□□□□ 0.2
SNRK-201ENST00000296088 DDX10Q13206 875 aaKnown RBP16.3■□□□□ 0.2
SNRK-201ENST00000296088 CHMP4BQ9H444 224 aaKnown RBP16.26■□□□□ 0.19
SNRK-201ENST00000296088 ESF1Q9H501 851 aaKnown RBP16.25■□□□□ 0.19
SNRK-201ENST00000296088 PTMSP20962 102 aa16.2■□□□□ 0.18
SNRK-201ENST00000296088 MIER1Q8N108 512 aa16.2■□□□□ 0.18
SNRK-201ENST00000296088 MSNP26038 577 aaKnown RBP16.2■□□□□ 0.18
SNRK-201ENST00000296088 CSRNP3Q8WYN3 585 aa16.19■□□□□ 0.18
SNRK-201ENST00000296088 CFAP44Q96MT7 982 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms