RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 DCAF8L2P0C7V8 631 aa20.84■□□□□ 0.93
CACNA1C-219ENST00000399649 PELP1Q8IZL8 1130 aaKnown RBP19.95■□□□□ 0.78
CACNA1C-219ENST00000399649 SUPT5HO00267 1087 aaKnown RBP19.67■□□□□ 0.74
CACNA1C-219ENST00000399649 EHMT2Q96KQ7 1210 aa19.42■□□□□ 0.7
CACNA1C-219ENST00000399649 APLP2Q06481 763 aa19.3■□□□□ 0.68
CACNA1C-219ENST00000399649 ERICH6Q7L0X2 663 aa19.21■□□□□ 0.67
CACNA1C-219ENST00000399649 FAM9AQ8IZU1 332 aaPredicted RBP19.14■□□□□ 0.65
CACNA1C-219ENST00000399649 SHROOM4Q9ULL8 1493 aa19.13■□□□□ 0.65
CACNA1C-219ENST00000399649 CCER1Q8TC90 406 aaPredicted RBP19.06■□□□□ 0.64
CACNA1C-219ENST00000399649 NISCHQ9Y2I1 1504 aa18.95■□□□□ 0.62
CACNA1C-219ENST00000399649 TTBK1Q5TCY1 1321 aaPredicted RBP18.82■□□□□ 0.6
CACNA1C-219ENST00000399649 CENPBP07199 599 aaPredicted RBP18.8■□□□□ 0.6
CACNA1C-219ENST00000399649 PCGF6Q9BYE7 350 aa18.66■□□□□ 0.58
CACNA1C-219ENST00000399649 NEFLP07196 543 aa18.58■□□□□ 0.57
CACNA1C-219ENST00000399649 ATP1B4Q9UN42 357 aaPredicted RBP18.56■□□□□ 0.56
CACNA1C-219ENST00000399649 RANGAP1P46060 587 aaPredicted RBP18.56■□□□□ 0.56
CACNA1C-219ENST00000399649 ZEB1P37275 1124 aaPredicted RBP18.54■□□□□ 0.56
CACNA1C-219ENST00000399649 MYT1Q01538 1121 aa18.45■□□□□ 0.54
CACNA1C-219ENST00000399649 YTHDC1Q96MU7 727 aaKnown RBP18.32■□□□□ 0.52
CACNA1C-219ENST00000399649 DAXXQ9UER7 740 aaPredicted RBP18.3■□□□□ 0.52
CACNA1C-219ENST00000399649 TRIM41Q8WV44 630 aa18.22■□□□□ 0.51
CACNA1C-219ENST00000399649 UBTFP17480 764 aaKnown RBP18.2■□□□□ 0.5
CACNA1C-219ENST00000399649 MYT1LQ9UL68 1186 aa18.03■□□□□ 0.48
CACNA1C-219ENST00000399649 POLR3GLQ9BT43 218 aa17.99■□□□□ 0.47
CACNA1C-219ENST00000399649 ZNF316A6NFI3 1004 aaPredicted RBP17.84■□□□□ 0.45
CACNA1C-219ENST00000399649 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.82■□□□□ 0.44
CACNA1C-219ENST00000399649 HNRNPUL2Q1KMD3 747 aaKnown RBP17.82■□□□□ 0.44
CACNA1C-219ENST00000399649 PPARGC1BQ86YN6 1023 aaKnown RBP17.81■□□□□ 0.44
CACNA1C-219ENST00000399649 SLC4A1APQ9BWU0 796 aaKnown RBP17.78■□□□□ 0.44
CACNA1C-219ENST00000399649 ITGAEP38570 1179 aa17.76■□□□□ 0.43
CACNA1C-219ENST00000399649 RTL5Q5HYW3 569 aaPredicted RBP17.75■□□□□ 0.43
CACNA1C-219ENST00000399649 CNGB1Q14028 1251 aaPredicted RBP17.74■□□□□ 0.43
CACNA1C-219ENST00000399649 CLSPNQ9HAW4 1339 aa17.73■□□□□ 0.43
CACNA1C-219ENST00000399649 CHIC1Q5VXU3 224 aa17.71■□□□□ 0.43
CACNA1C-219ENST00000399649 TRIM26Q12899 539 aaPredicted RBP17.68■□□□□ 0.42
CACNA1C-219ENST00000399649 HRCP23327 699 aa17.53■□□□□ 0.4
CACNA1C-219ENST00000399649 ZBTB47Q9UFB7 747 aaPredicted RBP17.45■□□□□ 0.38
CACNA1C-219ENST00000399649 TRIM52Q96A61 297 aa17.28■□□□□ 0.36
CACNA1C-219ENST00000399649 FAM50AQ14320 339 aaKnown RBP17.27■□□□□ 0.35
CACNA1C-219ENST00000399649 DIEXFQ68CQ4 756 aaKnown RBP17.26■□□□□ 0.35
CACNA1C-219ENST00000399649 SLC24A1O60721 1099 aa17.26■□□□□ 0.35
CACNA1C-219ENST00000399649 CDK11AQ9UQ88 783 aaPredicted RBP17.23■□□□□ 0.35
CACNA1C-219ENST00000399649 CANXP27824 592 aaKnown RBP17.22■□□□□ 0.35
CACNA1C-219ENST00000399649 BCANQ96GW7 911 aa17.19■□□□□ 0.34
CACNA1C-219ENST00000399649 BCL11AQ9H165 835 aa17.18■□□□□ 0.34
CACNA1C-219ENST00000399649 NEUROD1Q13562 356 aa17.16■□□□□ 0.34
CACNA1C-219ENST00000399649 ANP32CO43423 234 aa17.15■□□□□ 0.34
CACNA1C-219ENST00000399649 LOC105371045A0A1W2PR82 267 aa17.14■□□□□ 0.33
CACNA1C-219ENST00000399649 NEFMP07197 916 aa17.13■□□□□ 0.33
CACNA1C-219ENST00000399649 ZNF326Q5BKZ1 582 aaKnown RBP17.11■□□□□ 0.33
CACNA1C-219ENST00000399649 ANP32AP39687 249 aaKnown RBP17■□□□□ 0.31
CACNA1C-219ENST00000399649 ANP32BQ92688 251 aaKnown RBP17■□□□□ 0.31
CACNA1C-219ENST00000399649 GTF3C3Q9Y5Q9 886 aa16.96■□□□□ 0.31
CACNA1C-219ENST00000399649 PABPN1Q86U42 306 aaKnown RBP eCLIP16.95■□□□□ 0.3
CACNA1C-219ENST00000399649 ABCC9O60706 1549 aa16.9■□□□□ 0.3
CACNA1C-219ENST00000399649 FBLN2P98095 1184 aa16.9■□□□□ 0.3
CACNA1C-219ENST00000399649 NPM2Q86SE8 214 aaKnown RBP16.9■□□□□ 0.3
CACNA1C-219ENST00000399649 HSP90AA1P07900 732 aaKnown RBP16.87■□□□□ 0.29
CACNA1C-219ENST00000399649 EIF5BO60841 1220 aaKnown RBP16.83■□□□□ 0.29
CACNA1C-219ENST00000399649 UPF2Q9HAU5 1272 aaKnown RBP16.78■□□□□ 0.28
CACNA1C-219ENST00000399649 GLIPR1L2Q4G1C9 344 aa16.77■□□□□ 0.28
CACNA1C-219ENST00000399649 ESF1Q9H501 851 aaKnown RBP16.71■□□□□ 0.27
CACNA1C-219ENST00000399649 CDK11BP21127 795 aaKnown RBP16.67■□□□□ 0.26
CACNA1C-219ENST00000399649 STAG3Q9UJ98 1225 aa16.65■□□□□ 0.26
CACNA1C-219ENST00000399649 ZNF777Q9ULD5 760 aaPredicted RBP16.64■□□□□ 0.25
CACNA1C-219ENST00000399649 ARID3CA6NKF2 412 aa16.61■□□□□ 0.25
CACNA1C-219ENST00000399649 CHGAP10645 457 aaKnown RBP16.59■□□□□ 0.25
CACNA1C-219ENST00000399649 FKBP8Q14318 412 aa16.57■□□□□ 0.24
CACNA1C-219ENST00000399649 ACIN1Q9UKV3 1341 aaKnown RBP16.57■□□□□ 0.24
CACNA1C-219ENST00000399649 P3H3Q8IVL6 736 aa16.56■□□□□ 0.24
CACNA1C-219ENST00000399649 PLPPR3Q6T4P5 718 aa16.55■□□□□ 0.24
CACNA1C-219ENST00000399649 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.54■□□□□ 0.24
CACNA1C-219ENST00000399649 ARXQ96QS3 562 aa16.52■□□□□ 0.24
CACNA1C-219ENST00000399649 TONSLQ96HA7 1378 aa16.48■□□□□ 0.23
CACNA1C-219ENST00000399649 FAM9BQ8IZU0 186 aa16.48■□□□□ 0.23
CACNA1C-219ENST00000399649 NBR1Q14596 966 aa16.48■□□□□ 0.23
CACNA1C-219ENST00000399649 HNRNPUQ00839 825 aaKnown RBP eCLIP16.48■□□□□ 0.23
CACNA1C-219ENST00000399649 SALL2Q9Y467 1007 aaPredicted RBP16.46■□□□□ 0.23
CACNA1C-219ENST00000399649 MYH16Q9H6N6 1097 aa16.46■□□□□ 0.23
CACNA1C-219ENST00000399649 WDR43Q15061 677 aaKnown RBP eCLIP16.45■□□□□ 0.22
CACNA1C-219ENST00000399649 SCAF1Q9H7N4 1312 aaKnown RBP16.44■□□□□ 0.22
CACNA1C-219ENST00000399649 CCDC136Q96JN2 1154 aa16.44■□□□□ 0.22
CACNA1C-219ENST00000399649 NPM1P06748 294 aaKnown RBP eCLIP16.42■□□□□ 0.22
CACNA1C-219ENST00000399649 NCLP19338 710 aaKnown RBP16.41■□□□□ 0.22
CACNA1C-219ENST00000399649 A0A0G2JS52 829 aa16.4■□□□□ 0.22
CACNA1C-219ENST00000399649 TMC1Q8TDI8 760 aa16.39■□□□□ 0.21
CACNA1C-219ENST00000399649 TRIM44Q96DX7 344 aaPredicted RBP16.33■□□□□ 0.21
CACNA1C-219ENST00000399649 DDX10Q13206 875 aaKnown RBP16.32■□□□□ 0.2
CACNA1C-219ENST00000399649 ZBTB7CA1YPR0 619 aa16.31■□□□□ 0.2
CACNA1C-219ENST00000399649 BECN1Q14457 450 aa16.31■□□□□ 0.2
CACNA1C-219ENST00000399649 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.31■□□□□ 0.2
CACNA1C-219ENST00000399649 DDRGK1Q96HY6 314 aa16.3■□□□□ 0.2
CACNA1C-219ENST00000399649 TNNT2P45379 298 aaPredicted RBP16.29■□□□□ 0.2
CACNA1C-219ENST00000399649 GOLGA6L22H0YM25 854 aa16.28■□□□□ 0.2
CACNA1C-219ENST00000399649 ZRSR1Q15695 479 aaKnown RBP16.28■□□□□ 0.2
CACNA1C-219ENST00000399649 ANP32EQ9BTT0 268 aa16.26■□□□□ 0.19
CACNA1C-219ENST00000399649 CSRNP3Q8WYN3 585 aa16.25■□□□□ 0.19
CACNA1C-219ENST00000399649 PTMAP06454 111 aaKnown RBP16.23■□□□□ 0.19
CACNA1C-219ENST00000399649 MRS2Q9HD23 443 aa16.23■□□□□ 0.19
CACNA1C-219ENST00000399649 TULP1O00294 542 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms