Protein–RNA interactions for Protein: Q9Y2R4

DDX52, Probable ATP-dependent RNA helicase DDX52, humanhuman

Known RBP eCLIP

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52Q9Y2R4 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.58□□□□□ -1.362e-64■■□□□ 12.2
DDX52Q9Y2R4 ALB-205ENST00000476441 1604 ntTSL 56.58□□□□□ -1.362e-64■■□□□ 12.2
DDX52Q9Y2R4 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.53□□□□□ -1.362e-64■■□□□ 12.2
DDX52Q9Y2R4 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.13□□□□□ -1.432e-64■■□□□ 12.2
DDX52Q9Y2R4 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.03□□□□□ -1.442e-64■■□□□ 12.2
DDX52Q9Y2R4 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.51□□□□□ -1.532e-64■■□□□ 12.2
DDX52Q9Y2R4 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.532e-64■■□□□ 12.2
DDX52Q9Y2R4 ALB-218ENST00000515133 665 ntTSL 25.06□□□□□ -1.62e-64■■□□□ 12.2
DDX52Q9Y2R4 ALB-217ENST00000514786 577 ntTSL 42.37□□□□□ -2.032e-64■■□□□ 12.2
DDX52Q9Y2R4 MT-RNR1-201ENST00000389680 954 ntBASIC6.19□□□□□ -1.421e-323■■□□□ 12.2
DDX52Q9Y2R4 RNA5SP359-201ENST00000364838 113 ntBASIC17.04■□□□□ 0.322e-7■■□□□ 12.2
DDX52Q9Y2R4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.725e-14■■□□□ 12.1
DDX52Q9Y2R4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.695e-14■■□□□ 12.1
DDX52Q9Y2R4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.379e-8■■□□□ 12.1
DDX52Q9Y2R4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.062e-6■■□□□ 12.1
DDX52Q9Y2R4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC27.7■■■□□ 2.032e-6■■□□□ 12.1
DDX52Q9Y2R4 YWHAH-204ENST00000443669 822 ntTSL 327.33■■□□□ 1.972e-6■■□□□ 12.1
DDX52Q9Y2R4 SLC39A10-204ENST00000418005 563 ntTSL 427.15■■□□□ 1.942e-6■■□□□ 12.1
DDX52Q9Y2R4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC26.85■■□□□ 1.892e-6■■□□□ 12.1
DDX52Q9Y2R4 NECAB3-211ENST00000485399 1373 ntTSL 225.76■■□□□ 1.712e-6■■□□□ 12.1
DDX52Q9Y2R4 NECAB3-222ENST00000607805 969 ntTSL 525■■□□□ 1.592e-6■■□□□ 12.1
DDX52Q9Y2R4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC24.02■■□□□ 1.432e-6■■□□□ 12.1
DDX52Q9Y2R4 NECAB3-213ENST00000488489 2142 ntTSL 223.69■■□□□ 1.382e-6■■□□□ 12.1
DDX52Q9Y2R4 Z98883.1-201ENST00000409439 916 ntTSL 323.6■■□□□ 1.372e-6■■□□□ 12.1
DDX52Q9Y2R4 NECAB3-215ENST00000494174 859 ntTSL 523.4■■□□□ 1.342e-6■■□□□ 12.1
DDX52Q9Y2R4 NECAB3-217ENST00000606106 591 ntTSL 423.4■■□□□ 1.342e-6■■□□□ 12.1
DDX52Q9Y2R4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC23.18■■□□□ 1.32e-6■■□□□ 12.1
DDX52Q9Y2R4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.282e-6■■□□□ 12.1
DDX52Q9Y2R4 PIGQ-202ENST00000293874 603 ntTSL 422.82■■□□□ 1.242e-6■■□□□ 12.1
DDX52Q9Y2R4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC22.58■■□□□ 1.22e-6■■□□□ 12.1
DDX52Q9Y2R4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.22e-6■■□□□ 12.1
DDX52Q9Y2R4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC22.22■■□□□ 1.152e-6■■□□□ 12.1
DDX52Q9Y2R4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC22.13■■□□□ 1.132e-6■■□□□ 12.1
DDX52Q9Y2R4 PIGQ-207ENST00000439574 586 ntTSL 322.1■■□□□ 1.132e-6■■□□□ 12.1
DDX52Q9Y2R4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.132e-6■■□□□ 12.1
DDX52Q9Y2R4 NECAB3-220ENST00000606699 1022 ntTSL 221.87■■□□□ 1.092e-6■■□□□ 12.1
DDX52Q9Y2R4 OGFOD2-213ENST00000540324 1828 ntTSL 1 (best)21.58■■□□□ 1.052e-6■■□□□ 12.1
DDX52Q9Y2R4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.31■■□□□ 12e-6■■□□□ 12.1
DDX52Q9Y2R4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.59■□□□□ 0.892e-6■■□□□ 12.1
DDX52Q9Y2R4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.872e-6■■□□□ 12.1
DDX52Q9Y2R4 NECAB3-208ENST00000480994 732 ntTSL 520.12■□□□□ 0.812e-6■■□□□ 12.1
DDX52Q9Y2R4 NECAB3-214ENST00000493590 625 ntTSL 519.54■□□□□ 0.722e-6■■□□□ 12.1
DDX52Q9Y2R4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.82■□□□□ 0.62e-6■■□□□ 12.1
DDX52Q9Y2R4 SLC39A10-208ENST00000464301 571 ntTSL 418.4■□□□□ 0.542e-6■■□□□ 12.1
DDX52Q9Y2R4 PIGQ-221ENST00000636657 2841 ntTSL 518.36■□□□□ 0.532e-6■■□□□ 12.1
DDX52Q9Y2R4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.32■□□□□ 0.362e-6■■□□□ 12.1
DDX52Q9Y2R4 NECAB3-203ENST00000439478 925 ntTSL 516.99■□□□□ 0.312e-6■■□□□ 12.1
DDX52Q9Y2R4 NECAB3-219ENST00000606690 900 ntTSL 516.99■□□□□ 0.312e-6■■□□□ 12.1
DDX52Q9Y2R4 YWHAH-206ENST00000479649 662 ntTSL 313.23□□□□□ -0.292e-6■■□□□ 12.1
DDX52Q9Y2R4 SLC39A10-207ENST00000458054 593 ntTSL 410.7□□□□□ -0.72e-6■■□□□ 12.1
DDX52Q9Y2R4 SLC39A10-203ENST00000412905 337 ntTSL 310.06□□□□□ -0.82e-6■■□□□ 12.1
DDX52Q9Y2R4 SLC39A10-205ENST00000430412 4478 ntTSL 26.41□□□□□ -1.382e-6■■□□□ 12.1
DDX52Q9Y2R4 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.512e-6■■□□□ 12.1
DDX52Q9Y2R4 SLC39A10-206ENST00000444421 544 ntTSL 44.98□□□□□ -1.612e-6■■□□□ 12.1
DDX52Q9Y2R4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.862e-6■■□□□ 12.1
DDX52Q9Y2R4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.012e-6■■□□□ 12.1
DDX52Q9Y2R4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.317e-16■■□□□ 12.1
DDX52Q9Y2R4 SRSF4-206ENST00000605204 1399 ntTSL 1 (best)22.8■■□□□ 1.247e-16■■□□□ 12.1
DDX52Q9Y2R4 SRSF4-202ENST00000466448 1264 ntAPPRIS ALT2 TSL 322.35■■□□□ 1.177e-16■■□□□ 12.1
DDX52Q9Y2R4 PFKL-210ENST00000496824 1063 ntTSL 523.34■■□□□ 1.335e-6■■□□□ 12.1
DDX52Q9Y2R4 PFKL-205ENST00000466134 5986 ntTSL 220.33■□□□□ 0.855e-6■■□□□ 12.1
DDX52Q9Y2R4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.795e-6■■□□□ 12.1
DDX52Q9Y2R4 PFKL-202ENST00000397961 3390 ntTSL 1 (best)16.56■□□□□ 0.245e-6■■□□□ 12.1
DDX52Q9Y2R4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.743e-6■■□□□ 12
DDX52Q9Y2R4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.573e-6■■□□□ 12
DDX52Q9Y2R4 TAL1-204ENST00000464796 237 ntTSL 1 (best)10.48□□□□□ -0.733e-6■■□□□ 12
DDX52Q9Y2R4 GSE1-213ENST00000568080 289 ntTSL 517.57■□□□□ 0.42e-6■■□□□ 12
DDX52Q9Y2R4 CNOT6L-208ENST00000515506 4024 ntTSL 511.89□□□□□ -0.512e-7■■□□□ 12
DDX52Q9Y2R4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.494e-13■■□□□ 12
DDX52Q9Y2R4 UBAC1-202ENST00000465873 882 ntTSL 219.33■□□□□ 0.684e-13■■□□□ 12
DDX52Q9Y2R4 UBAC1-206ENST00000489050 864 ntTSL 311.1□□□□□ -0.634e-13■■□□□ 12
DDX52Q9Y2R4 FAAP20-210ENST00000440825 855 ntTSL 332.9■■■□□ 2.861e-7■■□□□ 11.9
DDX52Q9Y2R4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC32.53■■■□□ 2.81e-7■■□□□ 11.9
DDX52Q9Y2R4 FAAP20-207ENST00000420515 1544 ntTSL 1 (best)32.26■■■□□ 2.751e-7■■□□□ 11.9
DDX52Q9Y2R4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.421e-7■■□□□ 11.9
DDX52Q9Y2R4 FAAP20-201ENST00000378543 569 ntTSL 227.94■■■□□ 2.061e-7■■□□□ 11.9
DDX52Q9Y2R4 FAAP20-206ENST00000414253 2216 ntTSL 227.87■■■□□ 2.051e-7■■□□□ 11.9
DDX52Q9Y2R4 FAAP20-209ENST00000428120 2313 ntTSL 1 (best)26.99■■□□□ 1.911e-7■■□□□ 11.9
DDX52Q9Y2R4 FAAP20-203ENST00000400918 811 ntTSL 226.85■■□□□ 1.891e-7■■□□□ 11.9
DDX52Q9Y2R4 FAAP20-205ENST00000401813 2543 ntTSL 1 (best)21.31■■□□□ 11e-7■■□□□ 11.9
DDX52Q9Y2R4 FAAP20-211ENST00000469733 2280 ntTSL 219.88■□□□□ 0.771e-7■■□□□ 11.9
DDX52Q9Y2R4 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.76■□□□□ 0.271e-7■■□□□ 11.9
DDX52Q9Y2R4 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.251e-7■■□□□ 11.9
DDX52Q9Y2R4 PRAME-209ENST00000439106 891 ntAPPRIS ALT2 TSL 316.46■□□□□ 0.231e-7■■□□□ 11.9
DDX52Q9Y2R4 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.221e-7■■□□□ 11.9
DDX52Q9Y2R4 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.141e-7■■□□□ 11.9
DDX52Q9Y2R4 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.111e-7■■□□□ 11.9
DDX52Q9Y2R4 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.051e-7■■□□□ 11.9
DDX52Q9Y2R4 PRAME-207ENST00000420709 705 ntAPPRIS ALT2 TSL 215.25■□□□□ 0.031e-7■■□□□ 11.9
DDX52Q9Y2R4 CNOT3-210ENST00000618939 4516 ntTSL 515.07■□□□□ 01e-7■■□□□ 11.9
DDX52Q9Y2R4 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.021e-7■■□□□ 11.9
DDX52Q9Y2R4 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.031e-7■■□□□ 11.9
DDX52Q9Y2R4 PRAME-213ENST00000492657 2831 ntTSL 1 (best)14.76□□□□□ -0.051e-7■■□□□ 11.9
DDX52Q9Y2R4 FAAP20-213ENST00000487186 3576 ntTSL 214.68□□□□□ -0.061e-7■■□□□ 11.9
DDX52Q9Y2R4 FASN-207ENST00000635197 627 ntTSL 318.81■□□□□ 0.64e-8■■□□□ 11.9
DDX52Q9Y2R4 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.174e-8■■□□□ 11.9
DDX52Q9Y2R4 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.224e-8■■□□□ 11.9
DDX52Q9Y2R4 SMG1P3-202ENST00000437413 589 ntTSL 426.02■■□□□ 1.763e-7■■□□□ 11.9
DDX52Q9Y2R4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.59■□□□□ 0.573e-7■■□□□ 11.9
DDX52Q9Y2R4 RANBP1-213ENST00000486575 2177 ntTSL 224.45■■□□□ 1.56e-7■■□□□ 11.8
Retrieved 100 of 4,483 protein–RNA pairs in 118.9 ms