Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.396e-7■■■□□ 15.9
PABPN1Q86U42 PRKRIP1-204ENST00000469763 1642 ntTSL 545.85■■■■■ 4.932e-7■■■□□ 15.9
PABPN1Q86U42 PRKRIP1-207ENST00000482549 1625 ntTSL 1 (best)45.59■■■■■ 4.892e-7■■■□□ 15.9
PABPN1Q86U42 PRKRIP1-202ENST00000462601 884 ntTSL 2 BASIC24.46■■□□□ 1.512e-7■■■□□ 15.9
PABPN1Q86U42 ARHGEF10L-204ENST00000375415 4035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.365e-7■■■□□ 15.9
PABPN1Q86U42 HDAC6-230ENST00000488543 2484 ntTSL 221.73■■□□□ 1.078e-7■■■□□ 15.9
PABPN1Q86U42 TRMT1-211ENST00000588511 2251 ntTSL 530.88■■■□□ 2.536e-7■■■□□ 15.9
PABPN1Q86U42 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC29.82■■■□□ 2.366e-7■■■□□ 15.9
PABPN1Q86U42 TRMT1-222ENST00000593157 2127 ntTSL 228.69■■■□□ 2.186e-7■■■□□ 15.9
PABPN1Q86U42 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.426e-7■■■□□ 15.9
PABPN1Q86U42 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC22.88■■□□□ 1.256e-7■■■□□ 15.9
PABPN1Q86U42 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC22.35■■□□□ 1.176e-7■■■□□ 15.9
PABPN1Q86U42 TAF1C-219ENST00000568265 1140 ntAPPRIS ALT2 TSL 439.85■■■■□ 3.975e-7■■■□□ 15.9
PABPN1Q86U42 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC29.02■■■□□ 2.245e-7■■■□□ 15.9
PABPN1Q86U42 TAF1C-208ENST00000563428 2531 ntTSL 228.04■■■□□ 2.085e-7■■■□□ 15.9
PABPN1Q86U42 TAF1C-204ENST00000544090 2747 ntTSL 226.01■■□□□ 1.755e-7■■■□□ 15.9
PABPN1Q86U42 CAPN15-204ENST00000566977 279 ntTSL 531.08■■■□□ 2.578e-8■■■□□ 15.8
PABPN1Q86U42 ADAT2-201ENST00000237283 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.441e-7■■■□□ 15.8
PABPN1Q86U42 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.7□□□□□ -1.661e-7■■■□□ 15.8
PABPN1Q86U42 LTBP3-213ENST00000529371 575 ntTSL 247.73■■■■■ 5.232e-8■■■□□ 15.8
PABPN1Q86U42 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC39.4■■■■□ 3.97e-9■■■□□ 15.8
PABPN1Q86U42 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC31.37■■■□□ 2.617e-9■■■□□ 15.8
PABPN1Q86U42 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC30.33■■■□□ 2.457e-9■■■□□ 15.8
PABPN1Q86U42 DHRS2-204ENST00000553600 844 ntTSL 227.13■■□□□ 1.938e-10■■■□□ 15.8
PABPN1Q86U42 LTBP3-207ENST00000526927 2750 ntTSL 229.79■■■□□ 2.364e-8■■■□□ 15.8
PABPN1Q86U42 ARFGAP1-221ENST00000549047 1040 ntTSL 530.97■■■□□ 2.555e-14■■■□□ 15.8
PABPN1Q86U42 NSMF-202ENST00000371468 672 ntTSL 230.72■■■□□ 2.514e-9■■■□□ 15.8
PABPN1Q86U42 GSDMB-209ENST00000479136 2209 ntTSL 1 (best)18.8■□□□□ 0.62e-7■■■□□ 15.8
PABPN1Q86U42 PSME2-206ENST00000559042 643 nt26.29■■□□□ 1.84e-8■■■□□ 15.8
PABPN1Q86U42 ASPSCR1-206ENST00000578361 590 ntTSL 231.59■■■□□ 2.653e-9■■■□□ 15.8
PABPN1Q86U42 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC45.97■■■■■ 4.955e-8■■■□□ 15.8
PABPN1Q86U42 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC43.74■■■■■ 4.595e-8■■■□□ 15.8
PABPN1Q86U42 SHC2-202ENST00000587423 1691 ntTSL 237.98■■■■□ 3.675e-8■■■□□ 15.8
PABPN1Q86U42 EIF3B-212ENST00000494658 637 ntTSL 237.04■■■■□ 3.525e-8■■■□□ 15.8
PABPN1Q86U42 TPT1-AS1-202ENST00000379050 631 ntTSL 234.83■■■■□ 3.175e-8■■■□□ 15.8
PABPN1Q86U42 TPT1-AS1-222ENST00000619457 372 ntTSL 232.39■■■□□ 2.785e-8■■■□□ 15.8
PABPN1Q86U42 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC31.59■■■□□ 2.655e-8■■■□□ 15.8
PABPN1Q86U42 TPT1-AS1-208ENST00000520432 897 ntTSL 330.03■■■□□ 2.45e-8■■■□□ 15.8
PABPN1Q86U42 HDAC5-203ENST00000586339 465 ntTSL 229.11■■■□□ 2.256e-15■■■□□ 15.8
PABPN1Q86U42 SHC2-203ENST00000588376 1551 ntTSL 1 (best)28.2■■■□□ 2.15e-8■■■□□ 15.8
PABPN1Q86U42 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.95e-8■■■□□ 15.8
PABPN1Q86U42 TPT1-AS1-220ENST00000524062 2285 ntTSL 226.06■■□□□ 1.765e-8■■■□□ 15.8
PABPN1Q86U42 TPT1-AS1-201ENST00000330825 2869 ntTSL 222.13■■□□□ 1.135e-8■■■□□ 15.8
PABPN1Q86U42 EIF3B-207ENST00000465670 2766 ntTSL 222.1■■□□□ 1.135e-8■■■□□ 15.8
PABPN1Q86U42 TPT1-AS1-205ENST00000517509 3456 ntTSL 2 BASIC19.89■□□□□ 0.785e-8■■■□□ 15.8
PABPN1Q86U42 TMEM63A-204ENST00000482753 405 ntTSL 319.79■□□□□ 0.765e-8■■■□□ 15.8
PABPN1Q86U42 TCF7L2-223ENST00000629706 1755 ntTSL 1 (best) BASIC19.52■□□□□ 0.713e-6■■■□□ 15.8
PABPN1Q86U42 TCF7L2-205ENST00000355717 1979 ntTSL 1 (best) BASIC17.46■□□□□ 0.393e-6■■■□□ 15.8
PABPN1Q86U42 TCF7L2-204ENST00000352065 1553 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.353e-6■■■□□ 15.8
PABPN1Q86U42 TCF7L2-209ENST00000369395 1541 ntTSL 1 (best) BASIC14.51□□□□□ -0.093e-6■■■□□ 15.8
PABPN1Q86U42 TCF7L2-216ENST00000534894 3778 ntTSL 1 (best) BASIC14.27□□□□□ -0.133e-6■■■□□ 15.8
PABPN1Q86U42 TCF7L2-202ENST00000346198 667 ntTSL 313.61□□□□□ -0.233e-6■■■□□ 15.8
PABPN1Q86U42 TCF7L2-221ENST00000545257 2160 ntTSL 1 (best) BASIC13.2□□□□□ -0.33e-6■■■□□ 15.8
PABPN1Q86U42 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.475e-8■■■□□ 15.8
PABPN1Q86U42 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.475e-8■■■□□ 15.8
PABPN1Q86U42 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC11.56□□□□□ -0.563e-6■■■□□ 15.8
PABPN1Q86U42 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC11.05□□□□□ -0.643e-6■■■□□ 15.8
PABPN1Q86U42 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.713e-6■■■□□ 15.8
PABPN1Q86U42 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC10.02□□□□□ -0.813e-6■■■□□ 15.8
PABPN1Q86U42 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC9.49□□□□□ -0.893e-6■■■□□ 15.8
PABPN1Q86U42 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC9.09□□□□□ -0.953e-6■■■□□ 15.8
PABPN1Q86U42 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC8.72□□□□□ -1.013e-6■■■□□ 15.8
PABPN1Q86U42 SRRT-210ENST00000477529 540 ntTSL 228.04■■■□□ 2.084e-8■■■□□ 15.8
PABPN1Q86U42 SORBS3-211ENST00000521554 858 ntTSL 233.88■■■■□ 3.019e-8■■■□□ 15.8
PABPN1Q86U42 ENTPD6-210ENST00000433417 940 ntTSL 249.54■■■■■ 5.522e-6■■■□□ 15.8
PABPN1Q86U42 PLCG1-215ENST00000608689 969 ntTSL 529.44■■■□□ 2.34e-9■■■□□ 15.8
PABPN1Q86U42 PLCG1-216ENST00000608885 865 ntTSL 517■□□□□ 0.314e-9■■■□□ 15.8
PABPN1Q86U42 RRP1-202ENST00000471909 2544 ntTSL 1 (best)28.83■■■□□ 2.215e-7■■■□□ 15.8
PABPN1Q86U42 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.815e-7■■■□□ 15.8
PABPN1Q86U42 RRP1-201ENST00000467112 3019 ntTSL 1 (best)22.46■■□□□ 1.195e-7■■■□□ 15.8
PABPN1Q86U42 MYO18A-205ENST00000529578 2667 ntTSL 219.45■□□□□ 0.71e-8■■■□□ 15.8
PABPN1Q86U42 HGS-213ENST00000575078 330 ntTSL 323.83■■□□□ 1.411e-7■■■□□ 15.7
PABPN1Q86U42 KDM5D-209ENST00000492117 5235 ntTSL 218.4■□□□□ 0.542e-6■■■□□ 15.7
PABPN1Q86U42 KDM5D-201ENST00000317961 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.412e-6■■■□□ 15.7
PABPN1Q86U42 KDM5D-202ENST00000382806 5134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.342e-6■■■□□ 15.7
PABPN1Q86U42 KDM5D-210ENST00000541639 5579 ntAPPRIS P5 TSL 1 (best) BASIC14.9□□□□□ -0.022e-6■■■□□ 15.7
PABPN1Q86U42 KDM5D-206ENST00000469599 5501 ntTSL 214.88□□□□□ -0.032e-6■■■□□ 15.7
PABPN1Q86U42 KDM5D-204ENST00000440077 4701 ntAPPRIS ALT2 TSL 512.65□□□□□ -0.382e-6■■■□□ 15.7
PABPN1Q86U42 RHOT2-219ENST00000568950 1343 ntTSL 545.76■■■■■ 4.925e-7■■■□□ 15.7
PABPN1Q86U42 MSH5-SAPCD1-208ENST00000498473 2216 ntAPPRIS ALT2 TSL 1 (best)27.47■■□□□ 1.992e-6■■■□□ 15.7
PABPN1Q86U42 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.62e-6■■■□□ 15.7
PABPN1Q86U42 MSH5-206ENST00000423982 2706 ntTSL 524.27■■□□□ 1.482e-6■■■□□ 15.7
PABPN1Q86U42 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC22.89■■□□□ 1.252e-6■■■□□ 15.7
PABPN1Q86U42 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.192e-6■■■□□ 15.7
PABPN1Q86U42 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.992e-6■■■□□ 15.7
PABPN1Q86U42 MSH5-SAPCD1-207ENST00000493662 3991 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.362e-6■■■□□ 15.7
PABPN1Q86U42 MSH5-211ENST00000463144 2296 ntTSL 517.19■□□□□ 0.342e-6■■■□□ 15.7
PABPN1Q86U42 MSH5-205ENST00000395853 2704 ntTSL 2 BASIC15.49■□□□□ 0.072e-6■■■□□ 15.7
PABPN1Q86U42 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.754e-7■■■□□ 15.7
PABPN1Q86U42 PHF1-207ENST00000479029 933 ntTSL 234.31■■■■□ 3.081e-8■■■□□ 15.7
PABPN1Q86U42 PHF1-204ENST00000427826 862 ntTSL 330.76■■■□□ 2.511e-8■■■□□ 15.7
PABPN1Q86U42 CCNL2-212ENST00000480646 614 ntTSL 326.41■■□□□ 1.823e-20■■■□□ 15.7
PABPN1Q86U42 PGGHG-202ENST00000409479 3062 ntTSL 5 BASIC19.67■□□□□ 0.747e-7■■■□□ 15.7
PABPN1Q86U42 GIGYF1-203ENST00000471340 478 ntTSL 534.61■■■■□ 3.131e-7■■■□□ 15.7
PABPN1Q86U42 SGSM2-204ENST00000572841 2450 ntTSL 225.7■■□□□ 1.73e-6■■■□□ 15.7
PABPN1Q86U42 RHOF-207ENST00000546227 1219 ntTSL 545.58■■■■■ 4.895e-8■■■□□ 15.7
PABPN1Q86U42 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC38.07■■■■□ 3.685e-8■■■□□ 15.7
PABPN1Q86U42 RHOF-206ENST00000545544 826 ntTSL 532.93■■■□□ 2.865e-8■■■□□ 15.7
PABPN1Q86U42 RHOF-205ENST00000541657 1626 ntTSL 532.82■■■□□ 2.845e-8■■■□□ 15.7
PABPN1Q86U42 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC30.25■■■□□ 2.435e-8■■■□□ 15.7
Retrieved 100 of 8,254 protein–RNA pairs in 172.8 ms