RNA–Protein interactions for RNA: ENST00000588376.5

SHC2-203, Transcript of SHC adaptor protein 2, humanhuman

TSL 1 (best)

Gene SHC2, Length 1,551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC2-203ENST00000588376 NISCHQ9Y2I1 1504 aa36.22■■■■□ 3.39
SHC2-203ENST00000588376 CCDC180Q9P1Z9 1646 aa31.75■■■□□ 2.67
SHC2-203ENST00000588376 ZCCHC6Q5VYS8 1495 aaKnown RBP30.44■■■□□ 2.46
SHC2-203ENST00000588376 DCAF1Q9Y4B6 1507 aa30.01■■■□□ 2.39
SHC2-203ENST00000588376 ABCC9O60706 1549 aa30■■■□□ 2.39
SHC2-203ENST00000588376 DCAF8L2P0C7V8 631 aa29.77■■■□□ 2.36
SHC2-203ENST00000588376 MYO15BQ96JP2 1530 aa29.72■■■□□ 2.35
SHC2-203ENST00000588376 NACADO15069 1562 aa29.55■■■□□ 2.32
SHC2-203ENST00000588376 SHROOM4Q9ULL8 1493 aa29.33■■■□□ 2.29
SHC2-203ENST00000588376 RB1CC1Q8TDY2 1594 aa29.33■■■□□ 2.29
SHC2-203ENST00000588376 SCRIBQ14160 1630 aa29.09■■■□□ 2.25
SHC2-203ENST00000588376 UNC13AQ9UPW8 1703 aa28.76■■■□□ 2.19
SHC2-203ENST00000588376 BICRAQ9NZM4 1560 aa28.44■■■□□ 2.14
SHC2-203ENST00000588376 PABPN1Q86U42 306 aaKnown RBP eCLIP28.2■■■□□ 2.15e-8■■■□□ 15.8
SHC2-203ENST00000588376 CECR2Q9BXF3 1484 aa28.12■■■□□ 2.09
SHC2-203ENST00000588376 SUPT5HO00267 1087 aaKnown RBP28.11■■■□□ 2.09
SHC2-203ENST00000588376 RSF1Q96T23 1441 aaPredicted RBP28.01■■■□□ 2.07
SHC2-203ENST00000588376 BAZ1AQ9NRL2 1556 aaPredicted RBP28■■■□□ 2.07
SHC2-203ENST00000588376 MROH2BQ7Z745 1585 aa27.97■■■□□ 2.07
SHC2-203ENST00000588376 SMARCA4P51532 1647 aa27.91■■■□□ 2.06
SHC2-203ENST00000588376 WIZO95785 1651 aa27.74■■■□□ 2.03
SHC2-203ENST00000588376 PEG3Q9GZU2 1588 aa27.6■■■□□ 2.01
SHC2-203ENST00000588376 EIF4G1Q04637 1599 aaKnown RBP27.58■■■□□ 2.01
SHC2-203ENST00000588376 TOP2AP11388 1531 aaKnown RBP27.49■■□□□ 1.99
SHC2-203ENST00000588376 SMARCA2P51531 1590 aa27.46■■□□□ 1.99
SHC2-203ENST00000588376 ATAD2BQ9ULI0 1458 aa27.44■■□□□ 1.98
SHC2-203ENST00000588376 BAZ1BQ9UIG0 1483 aaKnown RBP27.28■■□□□ 1.96
SHC2-203ENST00000588376 HMGXB3Q12766 1538 aa27.24■■□□□ 1.95
SHC2-203ENST00000588376 NCAPD3P42695 1498 aa27.23■■□□□ 1.95
SHC2-203ENST00000588376 CC2D2AQ9P2K1 1620 aa27.2■■□□□ 1.95
SHC2-203ENST00000588376 CCDC88BA6NC98 1476 aa27.14■■□□□ 1.94
SHC2-203ENST00000588376 CHIC1Q5VXU3 224 aa26.88■■□□□ 1.89
SHC2-203ENST00000588376 CFTRP13569 1480 aa26.6■■□□□ 1.85
SHC2-203ENST00000588376 PRDM2Q13029 1718 aa26.55■■□□□ 1.84
SHC2-203ENST00000588376 ABCC8Q09428 1581 aa26.53■■□□□ 1.84
SHC2-203ENST00000588376 DNAJC5BQ9UF47 199 aa26.52■■□□□ 1.84
SHC2-203ENST00000588376 CADPSQ9ULU8 1353 aa26.5■■□□□ 1.83
SHC2-203ENST00000588376 TRIM41Q8WV44 630 aa26.46■■□□□ 1.83
SHC2-203ENST00000588376 WRNQ14191 1432 aaPredicted RBP eCLIP26.38■■□□□ 1.81
SHC2-203ENST00000588376 LAMC3Q9Y6N6 1575 aa26.38■■□□□ 1.81
SHC2-203ENST00000588376 SYNJ1O43426 1573 aa26.31■■□□□ 1.8
SHC2-203ENST00000588376 NESP48681 1621 aa26.31■■□□□ 1.8
SHC2-203ENST00000588376 BIVM-ERCC5R4GMW8 1640 aa26.24■■□□□ 1.79
SHC2-203ENST00000588376 TOP2BQ02880 1626 aa26.23■■□□□ 1.79
SHC2-203ENST00000588376 FANCD2Q9BXW9 1451 aa26.23■■□□□ 1.79
SHC2-203ENST00000588376 CUX1P39880 1505 aa26.17■■□□□ 1.78
SHC2-203ENST00000588376 PDS5BQ9NTI5 1447 aa26.12■■□□□ 1.77
SHC2-203ENST00000588376 CEP164Q9UPV0 1460 aa26.09■■□□□ 1.77
SHC2-203ENST00000588376 KIF21AQ7Z4S6 1674 aa26.05■■□□□ 1.76
SHC2-203ENST00000588376 DNMBPQ6XZF7 1577 aa26.01■■□□□ 1.75
SHC2-203ENST00000588376 SOGA1O94964 1423 aa25.97■■□□□ 1.75
SHC2-203ENST00000588376 EEA1Q15075 1411 aa25.96■■□□□ 1.75
SHC2-203ENST00000588376 TOPBP1Q92547 1522 aa25.94■■□□□ 1.74
SHC2-203ENST00000588376 FAM9AQ8IZU1 332 aaPredicted RBP25.94■■□□□ 1.74
SHC2-203ENST00000588376 URB2Q14146 1524 aaKnown RBP25.92■■□□□ 1.74
SHC2-203ENST00000588376 FGD5Q6ZNL6 1462 aa25.9■■□□□ 1.74
SHC2-203ENST00000588376 RUSC2Q8N2Y8 1516 aa25.88■■□□□ 1.73
SHC2-203ENST00000588376 MRC2Q9UBG0 1479 aa25.82■■□□□ 1.72
SHC2-203ENST00000588376 POLA1P09884 1462 aaPredicted RBP25.8■■□□□ 1.72
SHC2-203ENST00000588376 LOC105371045A0A1W2PR82 267 aa25.79■■□□□ 1.72
SHC2-203ENST00000588376 ERCC6Q03468 1493 aa25.76■■□□□ 1.71
SHC2-203ENST00000588376 CSRNP3Q8WYN3 585 aa25.73■■□□□ 1.71
SHC2-203ENST00000588376 KIF27Q86VH2 1401 aa25.72■■□□□ 1.71
SHC2-203ENST00000588376 WDR62O43379 1518 aa25.72■■□□□ 1.71
SHC2-203ENST00000588376 THOC2Q8NI27 1593 aaKnown RBP25.7■■□□□ 1.7
SHC2-203ENST00000588376 ABCA10Q8WWZ4 1543 aa25.69■■□□□ 1.7
SHC2-203ENST00000588376 CUX2O14529 1486 aa25.69■■□□□ 1.7
SHC2-203ENST00000588376 WDR97A6NE52 1622 aa25.69■■□□□ 1.7
SHC2-203ENST00000588376 RAD54L2Q9Y4B4 1467 aa25.68■■□□□ 1.7
SHC2-203ENST00000588376 KIF21BO75037 1637 aa25.66■■□□□ 1.7
SHC2-203ENST00000588376 TARBP1Q13395 1621 aaKnown RBP25.59■■□□□ 1.69
SHC2-203ENST00000588376 GOLGA3Q08378 1498 aa25.58■■□□□ 1.69
SHC2-203ENST00000588376 EHMT2Q96KQ7 1210 aa25.54■■□□□ 1.68
SHC2-203ENST00000588376 PRXQ9BXM0 1461 aa25.53■■□□□ 1.68
SHC2-203ENST00000588376 ABCA5Q8WWZ7 1642 aa25.53■■□□□ 1.68
SHC2-203ENST00000588376 ERICH3Q5RHP9 1530 aa25.51■■□□□ 1.67
SHC2-203ENST00000588376 IFT140Q96RY7 1462 aa25.49■■□□□ 1.67
SHC2-203ENST00000588376 IGF1RP08069 1367 aa25.48■■□□□ 1.67
SHC2-203ENST00000588376 RAPGEF2Q9Y4G8 1499 aa25.47■■□□□ 1.67
SHC2-203ENST00000588376 TNIKQ9UKE5 1360 aa25.45■■□□□ 1.66
SHC2-203ENST00000588376 GAPVD1Q14C86 1478 aa25.42■■□□□ 1.66
SHC2-203ENST00000588376 CUL7Q14999 1698 aa25.41■■□□□ 1.66
SHC2-203ENST00000588376 TDRD9Q8NDG6 1382 aaKnown RBP25.4■■□□□ 1.66
SHC2-203ENST00000588376 CARMIL1Q5VZK9 1371 aa25.36■■□□□ 1.65
SHC2-203ENST00000588376 PBRM1Q86U86 1689 aa25.36■■□□□ 1.65
SHC2-203ENST00000588376 UBTFP17480 764 aaKnown RBP25.35■■□□□ 1.65
SHC2-203ENST00000588376 ZNF608Q9ULD9 1512 aaPredicted RBP25.31■■□□□ 1.64
SHC2-203ENST00000588376 CEP162Q5TB80 1403 aa25.3■■□□□ 1.64
SHC2-203ENST00000588376 EIF4G3O43432 1585 aaKnown RBP25.29■■□□□ 1.64
SHC2-203ENST00000588376 AQRO60306 1485 aaKnown RBP eCLIP25.28■■□□□ 1.64
SHC2-203ENST00000588376 GRIN2BQ13224 1484 aa25.25■■□□□ 1.63
SHC2-203ENST00000588376 ADAMTS12P58397 1594 aa25.21■■□□□ 1.63
SHC2-203ENST00000588376 FHAD1B1AJZ9 1412 aa25.16■■□□□ 1.62
SHC2-203ENST00000588376 CLIP1P30622 1438 aa25.13■■□□□ 1.61
SHC2-203ENST00000588376 SNAPC4Q5SXM2 1469 aa25.11■■□□□ 1.61
SHC2-203ENST00000588376 CTTNBP2Q8WZ74 1663 aa25.1■■□□□ 1.61
SHC2-203ENST00000588376 MAGI1Q96QZ7 1491 aaPredicted RBP25.08■■□□□ 1.61
SHC2-203ENST00000588376 SYNJ2O15056 1496 aa24.97■■□□□ 1.59
SHC2-203ENST00000588376 GRIN2AQ12879 1464 aa24.95■■□□□ 1.59
SHC2-203ENST00000588376 ARAP1Q96P48 1450 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms