RNA–Protein interactions for RNA: ENST00000538897.5

TCF7L2-218, Transcript of transcription factor 7 like 2, humanhuman

TSL 1 (best) BASIC

Gene TCF7L2, Length 4,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF7L2-218ENST00000538897 NISCHQ9Y2I1 1504 aa13.62□□□□□ -0.23
TCF7L2-218ENST00000538897 HRCP23327 699 aa11.71□□□□□ -0.54
TCF7L2-218ENST00000538897 MYO15BQ96JP2 1530 aa11.68□□□□□ -0.54
TCF7L2-218ENST00000538897 ZCCHC6Q5VYS8 1495 aaKnown RBP11.66□□□□□ -0.54
TCF7L2-218ENST00000538897 CCDC180Q9P1Z9 1646 aa11.58□□□□□ -0.56
TCF7L2-218ENST00000538897 DCAF1Q9Y4B6 1507 aa11.5□□□□□ -0.57
TCF7L2-218ENST00000538897 CHIC1Q5VXU3 224 aa11.44□□□□□ -0.58
TCF7L2-218ENST00000538897 SHROOM4Q9ULL8 1493 aa11.43□□□□□ -0.58
TCF7L2-218ENST00000538897 SUPT5HO00267 1087 aaKnown RBP11.3□□□□□ -0.6
TCF7L2-218ENST00000538897 PPARGC1BQ86YN6 1023 aaKnown RBP11.28□□□□□ -0.6
TCF7L2-218ENST00000538897 PCGF6Q9BYE7 350 aa11.24□□□□□ -0.61
TCF7L2-218ENST00000538897 PELP1Q8IZL8 1130 aaKnown RBP11.17□□□□□ -0.62
TCF7L2-218ENST00000538897 ABCC9O60706 1549 aa11.1□□□□□ -0.63
TCF7L2-218ENST00000538897 TRIM26Q12899 539 aaPredicted RBP11.08□□□□□ -0.64
TCF7L2-218ENST00000538897 SCAF1Q9H7N4 1312 aaKnown RBP11.01□□□□□ -0.65
TCF7L2-218ENST00000538897 LOC105371045A0A1W2PR82 267 aa10.99□□□□□ -0.65
TCF7L2-218ENST00000538897 ZEB1P37275 1124 aaPredicted RBP10.97□□□□□ -0.65
TCF7L2-218ENST00000538897 RB1CC1Q8TDY2 1594 aa10.88□□□□□ -0.67
TCF7L2-218ENST00000538897 RSF1Q96T23 1441 aaPredicted RBP10.86□□□□□ -0.67
TCF7L2-218ENST00000538897 EIF4G1Q04637 1599 aaKnown RBP10.85□□□□□ -0.67
TCF7L2-218ENST00000538897 ACIN1Q9UKV3 1341 aaKnown RBP10.73□□□□□ -0.69
TCF7L2-218ENST00000538897 MYT1Q01538 1121 aa10.72□□□□□ -0.69
TCF7L2-218ENST00000538897 WRNQ14191 1432 aaPredicted RBP eCLIP10.68□□□□□ -0.7
TCF7L2-218ENST00000538897 NEUROD1Q13562 356 aa10.68□□□□□ -0.7
TCF7L2-218ENST00000538897 SCRIBQ14160 1630 aa10.64□□□□□ -0.71
TCF7L2-218ENST00000538897 BAZ1AQ9NRL2 1556 aaPredicted RBP10.61□□□□□ -0.71
TCF7L2-218ENST00000538897 TRIM41Q8WV44 630 aa10.58□□□□□ -0.72
TCF7L2-218ENST00000538897 MROH2BQ7Z745 1585 aa10.58□□□□□ -0.72
TCF7L2-218ENST00000538897 NACADO15069 1562 aa10.57□□□□□ -0.72
TCF7L2-218ENST00000538897 WIZO95785 1651 aa10.57□□□□□ -0.72
TCF7L2-218ENST00000538897 GTF3C3Q9Y5Q9 886 aa10.52□□□□□ -0.72
TCF7L2-218ENST00000538897 CECR2Q9BXF3 1484 aa10.52□□□□□ -0.73
TCF7L2-218ENST00000538897 DCAF8L2P0C7V8 631 aa10.49□□□□□ -0.73
TCF7L2-218ENST00000538897 DIEXFQ68CQ4 756 aaKnown RBP10.48□□□□□ -0.73
TCF7L2-218ENST00000538897 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.45□□□□□ -0.74
TCF7L2-218ENST00000538897 CENPBP07199 599 aaPredicted RBP10.44□□□□□ -0.74
TCF7L2-218ENST00000538897 TOP2AP11388 1531 aaKnown RBP10.43□□□□□ -0.74
TCF7L2-218ENST00000538897 TNIKQ9UKE5 1360 aa10.41□□□□□ -0.74
TCF7L2-218ENST00000538897 CEP162Q5TB80 1403 aa10.41□□□□□ -0.74
TCF7L2-218ENST00000538897 SMARCA2P51531 1590 aa10.4□□□□□ -0.74
TCF7L2-218ENST00000538897 CCDC88BA6NC98 1476 aa10.39□□□□□ -0.75
TCF7L2-218ENST00000538897 ABCC8Q09428 1581 aa10.38□□□□□ -0.75
TCF7L2-218ENST00000538897 CCER1Q8TC90 406 aaPredicted RBP10.37□□□□□ -0.75
TCF7L2-218ENST00000538897 ZNF316A6NFI3 1004 aaPredicted RBP10.36□□□□□ -0.75
TCF7L2-218ENST00000538897 EEA1Q15075 1411 aa10.36□□□□□ -0.75
TCF7L2-218ENST00000538897 FAM9AQ8IZU1 332 aaPredicted RBP10.36□□□□□ -0.75
TCF7L2-218ENST00000538897 KIF21BO75037 1637 aa10.35□□□□□ -0.75
TCF7L2-218ENST00000538897 SMARCA4P51532 1647 aa10.33□□□□□ -0.76
TCF7L2-218ENST00000538897 UNC13AQ9UPW8 1703 aa10.3□□□□□ -0.76
TCF7L2-218ENST00000538897 SOGA1O94964 1423 aa10.29□□□□□ -0.76
TCF7L2-218ENST00000538897 RUSC2Q8N2Y8 1516 aa10.27□□□□□ -0.77
TCF7L2-218ENST00000538897 PEG3Q9GZU2 1588 aa10.26□□□□□ -0.77
TCF7L2-218ENST00000538897 MIER1Q8N108 512 aa10.26□□□□□ -0.77
TCF7L2-218ENST00000538897 CLSPNQ9HAW4 1339 aa10.26□□□□□ -0.77
TCF7L2-218ENST00000538897 GOLGA3Q08378 1498 aa10.26□□□□□ -0.77
TCF7L2-218ENST00000538897 BAZ1BQ9UIG0 1483 aaKnown RBP10.22□□□□□ -0.77
TCF7L2-218ENST00000538897 CUX2O14529 1486 aa10.22□□□□□ -0.77
TCF7L2-218ENST00000538897 SYNJ1O43426 1573 aa10.19□□□□□ -0.78
TCF7L2-218ENST00000538897 VPS8Q8N3P4 1428 aa10.18□□□□□ -0.78
TCF7L2-218ENST00000538897 CEP164Q9UPV0 1460 aa10.17□□□□□ -0.78
TCF7L2-218ENST00000538897 CLIP1P30622 1438 aa10.17□□□□□ -0.78
TCF7L2-218ENST00000538897 SUPT16HQ9Y5B9 1047 aaKnown RBP10.15□□□□□ -0.78
TCF7L2-218ENST00000538897 CSRNP3Q8WYN3 585 aa10.14□□□□□ -0.79
TCF7L2-218ENST00000538897 TTBK1Q5TCY1 1321 aaPredicted RBP10.14□□□□□ -0.79
TCF7L2-218ENST00000538897 DHX57Q6P158 1386 aaKnown RBP10.13□□□□□ -0.79
TCF7L2-218ENST00000538897 EHMT2Q96KQ7 1210 aa10.12□□□□□ -0.79
TCF7L2-218ENST00000538897 BIVM-ERCC5R4GMW8 1640 aa10.11□□□□□ -0.79
TCF7L2-218ENST00000538897 TSHZ2Q9NRE2 1034 aa10.11□□□□□ -0.79
TCF7L2-218ENST00000538897 ERICH3Q5RHP9 1530 aa10.1□□□□□ -0.79
TCF7L2-218ENST00000538897 RRBP1Q9P2E9 1410 aaKnown RBP10.09□□□□□ -0.79
TCF7L2-218ENST00000538897 TOP2BQ02880 1626 aa10.07□□□□□ -0.8
TCF7L2-218ENST00000538897 ANP32EQ9BTT0 268 aa10.07□□□□□ -0.8
TCF7L2-218ENST00000538897 ARAP1Q96P48 1450 aa10.06□□□□□ -0.8
TCF7L2-218ENST00000538897 RAPGEF2Q9Y4G8 1499 aa10.05□□□□□ -0.8
TCF7L2-218ENST00000538897 YTHDC1Q96MU7 727 aaKnown RBP10.05□□□□□ -0.8
TCF7L2-218ENST00000538897 BICRAQ9NZM4 1560 aa10.05□□□□□ -0.8
TCF7L2-218ENST00000538897 MAPKBP1O60336 1514 aa10.05□□□□□ -0.8
TCF7L2-218ENST00000538897 PRXQ9BXM0 1461 aa10.02□□□□□ -0.8
TCF7L2-218ENST00000538897 MAP3K1Q13233 1512 aa9.97□□□□□ -0.81
TCF7L2-218ENST00000538897 BCL11AQ9H165 835 aa9.97□□□□□ -0.81
TCF7L2-218ENST00000538897 HNRNPUL2Q1KMD3 747 aaKnown RBP9.93□□□□□ -0.82
TCF7L2-218ENST00000538897 UBTFP17480 764 aaKnown RBP9.92□□□□□ -0.82
TCF7L2-218ENST00000538897 CFAP43Q8NDM7 1665 aa9.91□□□□□ -0.82
TCF7L2-218ENST00000538897 WDR97A6NE52 1622 aa9.9□□□□□ -0.82
TCF7L2-218ENST00000538897 ATAD2BQ9ULI0 1458 aa9.89□□□□□ -0.83
TCF7L2-218ENST00000538897 PRDM2Q13029 1718 aa9.89□□□□□ -0.83
TCF7L2-218ENST00000538897 TIAM1Q13009 1591 aa9.88□□□□□ -0.83
TCF7L2-218ENST00000538897 ARHGAP35Q9NRY4 1499 aa9.87□□□□□ -0.83
TCF7L2-218ENST00000538897 KCNH8Q96L42 1107 aa9.86□□□□□ -0.83
TCF7L2-218ENST00000538897 PPP1R15AO75807 674 aaPredicted RBP9.85□□□□□ -0.83
TCF7L2-218ENST00000538897 KANK4Q5T7N3 995 aaPredicted RBP9.85□□□□□ -0.83
TCF7L2-218ENST00000538897 KDM5BQ9UGL1 1544 aa9.85□□□□□ -0.83
TCF7L2-218ENST00000538897 CCNB3Q8WWL7 1395 aa9.84□□□□□ -0.83
TCF7L2-218ENST00000538897 CUX1P39880 1505 aa9.84□□□□□ -0.83
TCF7L2-218ENST00000538897 MSH5O43196 834 aa9.82□□□□□ -0.84
TCF7L2-218ENST00000538897 RBM19Q9Y4C8 960 aaKnown RBP9.82□□□□□ -0.84
TCF7L2-218ENST00000538897 RAB3GAP2Q9H2M9 1393 aa9.81□□□□□ -0.84
TCF7L2-218ENST00000538897 CCER2I3L3R5 266 aa9.79□□□□□ -0.84
TCF7L2-218ENST00000538897 FANCIQ9NVI1 1328 aa9.79□□□□□ -0.84
TCF7L2-218ENST00000538897 TIMELESSQ9UNS1 1208 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms