RNA–Protein interactions for RNA: ENST00000575078.5

HGS-213, Transcript of hepatocyte growth factor-regulated tyrosine kinase substrate, humanhuman

TSL 3

Gene HGS, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HGS-213ENST00000575078 NISCHQ9Y2I1 1504 aa29.34■■■□□ 2.29
HGS-213ENST00000575078 CCDC180Q9P1Z9 1646 aa26.28■■□□□ 1.8
HGS-213ENST00000575078 ABCC9O60706 1549 aa25.63■■□□□ 1.69
HGS-213ENST00000575078 RB1CC1Q8TDY2 1594 aa24.71■■□□□ 1.55
HGS-213ENST00000575078 NACADO15069 1562 aa24.65■■□□□ 1.54
HGS-213ENST00000575078 MYO15BQ96JP2 1530 aa24.5■■□□□ 1.51
HGS-213ENST00000575078 ZCCHC6Q5VYS8 1495 aaKnown RBP24.44■■□□□ 1.5
HGS-213ENST00000575078 DCAF8L2P0C7V8 631 aa24.34■■□□□ 1.49
HGS-213ENST00000575078 DCAF1Q9Y4B6 1507 aa24.34■■□□□ 1.49
HGS-213ENST00000575078 UNC13AQ9UPW8 1703 aa24.28■■□□□ 1.48
HGS-213ENST00000575078 BICRAQ9NZM4 1560 aa23.97■■□□□ 1.43
HGS-213ENST00000575078 SCRIBQ14160 1630 aa23.84■■□□□ 1.41
HGS-213ENST00000575078 PABPN1Q86U42 306 aaKnown RBP eCLIP23.83■■□□□ 1.411e-7■■■□□ 15.7
HGS-213ENST00000575078 SHROOM4Q9ULL8 1493 aa23.76■■□□□ 1.39
HGS-213ENST00000575078 DNAJC5BQ9UF47 199 aa23.56■■□□□ 1.36
HGS-213ENST00000575078 EIF4G1Q04637 1599 aaKnown RBP23.33■■□□□ 1.33
HGS-213ENST00000575078 CC2D2AQ9P2K1 1620 aa23.27■■□□□ 1.32
HGS-213ENST00000575078 CECR2Q9BXF3 1484 aa23.07■■□□□ 1.28
HGS-213ENST00000575078 SMARCA4P51532 1647 aa22.84■■□□□ 1.25
HGS-213ENST00000575078 BAZ1AQ9NRL2 1556 aaPredicted RBP22.78■■□□□ 1.24
HGS-213ENST00000575078 SMARCA2P51531 1590 aa22.71■■□□□ 1.23
HGS-213ENST00000575078 NCAPD3P42695 1498 aa22.69■■□□□ 1.22
HGS-213ENST00000575078 ATAD2BQ9ULI0 1458 aa22.67■■□□□ 1.22
HGS-213ENST00000575078 PEG3Q9GZU2 1588 aa22.65■■□□□ 1.22
HGS-213ENST00000575078 HMGXB3Q12766 1538 aa22.65■■□□□ 1.22
HGS-213ENST00000575078 MROH2BQ7Z745 1585 aa22.58■■□□□ 1.2
HGS-213ENST00000575078 BAZ1BQ9UIG0 1483 aaKnown RBP22.49■■□□□ 1.19
HGS-213ENST00000575078 WIZO95785 1651 aa22.38■■□□□ 1.17
HGS-213ENST00000575078 RSF1Q96T23 1441 aaPredicted RBP22.25■■□□□ 1.15
HGS-213ENST00000575078 LAMC3Q9Y6N6 1575 aa22.18■■□□□ 1.14
HGS-213ENST00000575078 NESP48681 1621 aa22.16■■□□□ 1.14
HGS-213ENST00000575078 TOP2AP11388 1531 aaKnown RBP22.14■■□□□ 1.13
HGS-213ENST00000575078 ERCC6Q03468 1493 aa22.12■■□□□ 1.13
HGS-213ENST00000575078 KIF21AQ7Z4S6 1674 aa22.03■■□□□ 1.12
HGS-213ENST00000575078 CUX2O14529 1486 aa22■■□□□ 1.11
HGS-213ENST00000575078 CADPSQ9ULU8 1353 aa21.99■■□□□ 1.11
HGS-213ENST00000575078 THOC2Q8NI27 1593 aaKnown RBP21.97■■□□□ 1.11
HGS-213ENST00000575078 PDS5BQ9NTI5 1447 aa21.96■■□□□ 1.11
HGS-213ENST00000575078 PRDM2Q13029 1718 aa21.92■■□□□ 1.1
HGS-213ENST00000575078 CFTRP13569 1480 aa21.87■■□□□ 1.09
HGS-213ENST00000575078 CCDC88BA6NC98 1476 aa21.81■■□□□ 1.08
HGS-213ENST00000575078 MRC2Q9UBG0 1479 aa21.77■■□□□ 1.07
HGS-213ENST00000575078 CEP164Q9UPV0 1460 aa21.77■■□□□ 1.07
HGS-213ENST00000575078 FANCD2Q9BXW9 1451 aa21.76■■□□□ 1.07
HGS-213ENST00000575078 WDR62O43379 1518 aa21.74■■□□□ 1.07
HGS-213ENST00000575078 URB2Q14146 1524 aaKnown RBP21.56■■□□□ 1.04
HGS-213ENST00000575078 SUPT5HO00267 1087 aaKnown RBP21.46■■□□□ 1.03
HGS-213ENST00000575078 ABCC8Q09428 1581 aa21.43■■□□□ 1.02
HGS-213ENST00000575078 DNMBPQ6XZF7 1577 aa21.43■■□□□ 1.02
HGS-213ENST00000575078 TOPBP1Q92547 1522 aa21.42■■□□□ 1.02
HGS-213ENST00000575078 DNAJC5Q9H3Z4 198 aa21.36■■□□□ 1.01
HGS-213ENST00000575078 IFT140Q96RY7 1462 aa21.31■■□□□ 1
HGS-213ENST00000575078 TARBP1Q13395 1621 aaKnown RBP21.25■□□□□ 0.99
HGS-213ENST00000575078 POLA1P09884 1462 aaPredicted RBP21.22■□□□□ 0.99
HGS-213ENST00000575078 CUX1P39880 1505 aa21.21■□□□□ 0.99
HGS-213ENST00000575078 EIF4G3O43432 1585 aaKnown RBP21.2■□□□□ 0.98
HGS-213ENST00000575078 ZNF608Q9ULD9 1512 aaPredicted RBP21.19■□□□□ 0.98
HGS-213ENST00000575078 FGD5Q6ZNL6 1462 aa21.14■□□□□ 0.98
HGS-213ENST00000575078 WDR97A6NE52 1622 aa21.14■□□□□ 0.97
HGS-213ENST00000575078 BIVM-ERCC5R4GMW8 1640 aa21.08■□□□□ 0.97
HGS-213ENST00000575078 RAD54L2Q9Y4B4 1467 aa21.07■□□□□ 0.96
HGS-213ENST00000575078 SOGA1O94964 1423 aa21.07■□□□□ 0.96
HGS-213ENST00000575078 TOP2BQ02880 1626 aa21.04■□□□□ 0.96
HGS-213ENST00000575078 AQRO60306 1485 aaKnown RBP eCLIP21.02■□□□□ 0.962e-13■■■■■ 33.9
HGS-213ENST00000575078 CHD1O14646 1710 aa21.01■□□□□ 0.95
HGS-213ENST00000575078 SYNJ1O43426 1573 aa21■□□□□ 0.95
HGS-213ENST00000575078 WRNQ14191 1432 aaPredicted RBP eCLIP20.99■□□□□ 0.95
HGS-213ENST00000575078 PBRM1Q86U86 1689 aa20.97■□□□□ 0.95
HGS-213ENST00000575078 ABCA10Q8WWZ4 1543 aa20.96■□□□□ 0.95
HGS-213ENST00000575078 ABCA5Q8WWZ7 1642 aa20.94■□□□□ 0.94
HGS-213ENST00000575078 OSCARQ8IYS5 282 aa20.94■□□□□ 0.94
HGS-213ENST00000575078 TDRD9Q8NDG6 1382 aaKnown RBP20.94■□□□□ 0.94
HGS-213ENST00000575078 GRIN2BQ13224 1484 aa20.89■□□□□ 0.94
HGS-213ENST00000575078 MAGI1Q96QZ7 1491 aaPredicted RBP20.88■□□□□ 0.93
HGS-213ENST00000575078 SNAPC4Q5SXM2 1469 aa20.88■□□□□ 0.93
HGS-213ENST00000575078 GAPVD1Q14C86 1478 aa20.87■□□□□ 0.93
HGS-213ENST00000575078 SYNJ2O15056 1496 aa20.79■□□□□ 0.92
HGS-213ENST00000575078 RIMBP3CA6NJZ7 1639 aa20.76■□□□□ 0.91
HGS-213ENST00000575078 RIMBP3BA6NNM3 1639 aa20.76■□□□□ 0.91
HGS-213ENST00000575078 RIMBP3Q9UFD9 1639 aa20.76■□□□□ 0.91
HGS-213ENST00000575078 ADAMTS12P58397 1594 aa20.74■□□□□ 0.91
HGS-213ENST00000575078 ERICH3Q5RHP9 1530 aa20.73■□□□□ 0.91
HGS-213ENST00000575078 FBLN2P98095 1184 aa20.72■□□□□ 0.91
HGS-213ENST00000575078 CLASP1Q7Z460 1538 aa20.72■□□□□ 0.91
HGS-213ENST00000575078 ARHGEF11O15085 1522 aa20.7■□□□□ 0.9
HGS-213ENST00000575078 CHMP7Q8WUX9 453 aaPredicted RBP20.68■□□□□ 0.9
HGS-213ENST00000575078 GRIN2AQ12879 1464 aa20.64■□□□□ 0.89
HGS-213ENST00000575078 FHAD1B1AJZ9 1412 aa20.62■□□□□ 0.89
HGS-213ENST00000575078 CUL7Q14999 1698 aa20.58■□□□□ 0.88
HGS-213ENST00000575078 CEP170Q5SW79 1584 aa20.56■□□□□ 0.88
HGS-213ENST00000575078 NUP160Q12769 1436 aa20.55■□□□□ 0.88
HGS-213ENST00000575078 KIF27Q86VH2 1401 aa20.55■□□□□ 0.88
HGS-213ENST00000575078 TRIM41Q8WV44 630 aa20.53■□□□□ 0.88
HGS-213ENST00000575078 ARAP1Q96P48 1450 aa20.52■□□□□ 0.88
HGS-213ENST00000575078 SHROOM2Q13796 1616 aa20.5■□□□□ 0.87
HGS-213ENST00000575078 IGF1RP08069 1367 aa20.46■□□□□ 0.87
HGS-213ENST00000575078 RUSC2Q8N2Y8 1516 aa20.44■□□□□ 0.86
HGS-213ENST00000575078 CYB5RLQ6IPT4 315 aa20.38■□□□□ 0.85
HGS-213ENST00000575078 ERCC6L2Q5T890 1561 aa20.37■□□□□ 0.85
HGS-213ENST00000575078 CARMIL1Q5VZK9 1371 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms