RNA–Protein interactions for RNA: ENST00000494658.1

EIF3B-212, Transcript of eukaryotic translation initiation factor 3 subunit B, humanhuman

TSL 2

Gene EIF3B, Length 637 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3B-212ENST00000494658 NISCHQ9Y2I1 1504 aa44.32■■■■■ 4.69
EIF3B-212ENST00000494658 CCDC180Q9P1Z9 1646 aa39.85■■■■□ 3.97
EIF3B-212ENST00000494658 ABCC9O60706 1549 aa39.85■■■■□ 3.97
EIF3B-212ENST00000494658 RB1CC1Q8TDY2 1594 aa37.86■■■■□ 3.65
EIF3B-212ENST00000494658 NACADO15069 1562 aa37.57■■■■□ 3.6
EIF3B-212ENST00000494658 DNAJC5BQ9UF47 199 aa37.39■■■■□ 3.58
EIF3B-212ENST00000494658 UNC13AQ9UPW8 1703 aa37.32■■■■□ 3.56
EIF3B-212ENST00000494658 DCAF8L2P0C7V8 631 aa37.31■■■■□ 3.56
EIF3B-212ENST00000494658 PABPN1Q86U42 306 aaKnown RBP eCLIP37.04■■■■□ 3.525e-8■■■□□ 15.8
EIF3B-212ENST00000494658 MYO15BQ96JP2 1530 aa36.99■■■■□ 3.51
EIF3B-212ENST00000494658 BICRAQ9NZM4 1560 aa36.9■■■■□ 3.5
EIF3B-212ENST00000494658 ZCCHC6Q5VYS8 1495 aaKnown RBP36.75■■■■□ 3.47
EIF3B-212ENST00000494658 DCAF1Q9Y4B6 1507 aa36.54■■■■□ 3.44
EIF3B-212ENST00000494658 SCRIBQ14160 1630 aa36.37■■■■□ 3.41
EIF3B-212ENST00000494658 SHROOM4Q9ULL8 1493 aa36.15■■■■□ 3.38
EIF3B-212ENST00000494658 CC2D2AQ9P2K1 1620 aa36.04■■■■□ 3.36
EIF3B-212ENST00000494658 EIF4G1Q04637 1599 aaKnown RBP35.92■■■■□ 3.34
EIF3B-212ENST00000494658 CECR2Q9BXF3 1484 aa35.83■■■■□ 3.33
EIF3B-212ENST00000494658 SMARCA4P51532 1647 aa34.66■■■■□ 3.14
EIF3B-212ENST00000494658 NCAPD3P42695 1498 aa34.65■■■■□ 3.14
EIF3B-212ENST00000494658 ATAD2BQ9ULI0 1458 aa34.6■■■■□ 3.13
EIF3B-212ENST00000494658 SMARCA2P51531 1590 aa34.48■■■■□ 3.11
EIF3B-212ENST00000494658 HMGXB3Q12766 1538 aa34.45■■■■□ 3.11
EIF3B-212ENST00000494658 BAZ1AQ9NRL2 1556 aaPredicted RBP34.37■■■■□ 3.09
EIF3B-212ENST00000494658 ERCC6Q03468 1493 aa34.32■■■■□ 3.08
EIF3B-212ENST00000494658 NESP48681 1621 aa34.28■■■■□ 3.08
EIF3B-212ENST00000494658 BAZ1BQ9UIG0 1483 aaKnown RBP34.26■■■■□ 3.07
EIF3B-212ENST00000494658 PEG3Q9GZU2 1588 aa34.25■■■■□ 3.07
EIF3B-212ENST00000494658 CUX2O14529 1486 aa34.24■■■■□ 3.07
EIF3B-212ENST00000494658 MROH2BQ7Z745 1585 aa34.22■■■■□ 3.07
EIF3B-212ENST00000494658 DNAJC5Q9H3Z4 198 aa34.2■■■■□ 3.07
EIF3B-212ENST00000494658 THOC2Q8NI27 1593 aaKnown RBP33.97■■■■□ 3.03
EIF3B-212ENST00000494658 LAMC3Q9Y6N6 1575 aa33.94■■■■□ 3.02
EIF3B-212ENST00000494658 KIF21AQ7Z4S6 1674 aa33.94■■■■□ 3.02
EIF3B-212ENST00000494658 WIZO95785 1651 aa33.89■■■■□ 3.02
EIF3B-212ENST00000494658 PDS5BQ9NTI5 1447 aa33.62■■■□□ 2.97
EIF3B-212ENST00000494658 CADPSQ9ULU8 1353 aa33.58■■■□□ 2.97
EIF3B-212ENST00000494658 MRC2Q9UBG0 1479 aa33.44■■■□□ 2.94
EIF3B-212ENST00000494658 RSF1Q96T23 1441 aaPredicted RBP33.42■■■□□ 2.94
EIF3B-212ENST00000494658 WDR62O43379 1518 aa33.4■■■□□ 2.94
EIF3B-212ENST00000494658 TOP2AP11388 1531 aaKnown RBP33.33■■■□□ 2.93
EIF3B-212ENST00000494658 CEP164Q9UPV0 1460 aa33.3■■■□□ 2.92
EIF3B-212ENST00000494658 FANCD2Q9BXW9 1451 aa33.27■■■□□ 2.92
EIF3B-212ENST00000494658 CFTRP13569 1480 aa33.24■■■□□ 2.91
EIF3B-212ENST00000494658 PRDM2Q13029 1718 aa33.15■■■□□ 2.9
EIF3B-212ENST00000494658 URB2Q14146 1524 aaKnown RBP33.07■■■□□ 2.89
EIF3B-212ENST00000494658 CCDC88BA6NC98 1476 aa32.94■■■□□ 2.86
EIF3B-212ENST00000494658 TRIM41Q8WV44 630 aa32.76■■■□□ 2.83
EIF3B-212ENST00000494658 TOPBP1Q92547 1522 aa32.67■■■□□ 2.82
EIF3B-212ENST00000494658 ZNF608Q9ULD9 1512 aaPredicted RBP32.67■■■□□ 2.82
EIF3B-212ENST00000494658 IFT140Q96RY7 1462 aa32.59■■■□□ 2.81
EIF3B-212ENST00000494658 OSCARQ8IYS5 282 aa32.58■■■□□ 2.81
EIF3B-212ENST00000494658 DNMBPQ6XZF7 1577 aa32.56■■■□□ 2.8
EIF3B-212ENST00000494658 EIF4G3O43432 1585 aaKnown RBP32.53■■■□□ 2.8
EIF3B-212ENST00000494658 TARBP1Q13395 1621 aaKnown RBP32.46■■■□□ 2.79
EIF3B-212ENST00000494658 ABCC8Q09428 1581 aa32.45■■■□□ 2.78
EIF3B-212ENST00000494658 RIMBP3CA6NJZ7 1639 aa32.43■■■□□ 2.78
EIF3B-212ENST00000494658 RIMBP3BA6NNM3 1639 aa32.43■■■□□ 2.78
EIF3B-212ENST00000494658 RIMBP3Q9UFD9 1639 aa32.43■■■□□ 2.78
EIF3B-212ENST00000494658 CHD1O14646 1710 aa32.38■■■□□ 2.77
EIF3B-212ENST00000494658 POLA1P09884 1462 aaPredicted RBP32.33■■■□□ 2.77
EIF3B-212ENST00000494658 AQRO60306 1485 aaKnown RBP eCLIP32.31■■■□□ 2.763e-7■■■■■ 29.4
EIF3B-212ENST00000494658 RAD54L2Q9Y4B4 1467 aa32.25■■■□□ 2.75
EIF3B-212ENST00000494658 ARHGEF11O15085 1522 aa32.24■■■□□ 2.75
EIF3B-212ENST00000494658 CUX1P39880 1505 aa32.16■■■□□ 2.74
EIF3B-212ENST00000494658 FGD5Q6ZNL6 1462 aa32.14■■■□□ 2.74
EIF3B-212ENST00000494658 SOGA1O94964 1423 aa32.1■■■□□ 2.73
EIF3B-212ENST00000494658 TDRD9Q8NDG6 1382 aaKnown RBP32.08■■■□□ 2.73
EIF3B-212ENST00000494658 WDR97A6NE52 1622 aa32.05■■■□□ 2.72
EIF3B-212ENST00000494658 FBLN2P98095 1184 aa32.01■■■□□ 2.71
EIF3B-212ENST00000494658 SNAPC4Q5SXM2 1469 aa32.01■■■□□ 2.71
EIF3B-212ENST00000494658 ARAP1Q96P48 1450 aa31.95■■■□□ 2.7
EIF3B-212ENST00000494658 PBRM1Q86U86 1689 aa31.94■■■□□ 2.7
EIF3B-212ENST00000494658 SUPT5HO00267 1087 aaKnown RBP31.89■■■□□ 2.7
EIF3B-212ENST00000494658 CYB5RLQ6IPT4 315 aa31.89■■■□□ 2.7
EIF3B-212ENST00000494658 CLASP1Q7Z460 1538 aa31.89■■■□□ 2.7
EIF3B-212ENST00000494658 MAGI1Q96QZ7 1491 aaPredicted RBP31.84■■■□□ 2.69
EIF3B-212ENST00000494658 GRIN2BQ13224 1484 aa31.84■■■□□ 2.69
EIF3B-212ENST00000494658 ABCA5Q8WWZ7 1642 aa31.79■■■□□ 2.68
EIF3B-212ENST00000494658 SYNJ1O43426 1573 aa31.79■■■□□ 2.68
EIF3B-212ENST00000494658 SYNJ2O15056 1496 aa31.75■■■□□ 2.67
EIF3B-212ENST00000494658 GAPVD1Q14C86 1478 aa31.75■■■□□ 2.67
EIF3B-212ENST00000494658 CHMP7Q8WUX9 453 aaPredicted RBP31.73■■■□□ 2.67
EIF3B-212ENST00000494658 ABCA10Q8WWZ4 1543 aa31.73■■■□□ 2.67
EIF3B-212ENST00000494658 BIVM-ERCC5R4GMW8 1640 aa31.67■■■□□ 2.66
EIF3B-212ENST00000494658 TOP2BQ02880 1626 aa31.6■■■□□ 2.65
EIF3B-212ENST00000494658 ADAMTS12P58397 1594 aa31.55■■■□□ 2.64
EIF3B-212ENST00000494658 TRHP20396 242 aaPredicted RBP31.52■■■□□ 2.64
EIF3B-212ENST00000494658 WRNQ14191 1432 aaPredicted RBP eCLIP31.51■■■□□ 2.64
EIF3B-212ENST00000494658 ERCC6L2Q5T890 1561 aa31.47■■■□□ 2.63
EIF3B-212ENST00000494658 GRIN2AQ12879 1464 aa31.47■■■□□ 2.63
EIF3B-212ENST00000494658 CEP170Q5SW79 1584 aa31.47■■■□□ 2.63
EIF3B-212ENST00000494658 NUP160Q12769 1436 aa31.35■■■□□ 2.61
EIF3B-212ENST00000494658 SHROOM2Q13796 1616 aa31.32■■■□□ 2.6
EIF3B-212ENST00000494658 ERICH3Q5RHP9 1530 aa31.32■■■□□ 2.6
EIF3B-212ENST00000494658 FHAD1B1AJZ9 1412 aa31.31■■■□□ 2.6
EIF3B-212ENST00000494658 RUSC2Q8N2Y8 1516 aa31.12■■■□□ 2.57
EIF3B-212ENST00000494658 PRG4Q92954 1404 aaPredicted RBP31.04■■■□□ 2.56
EIF3B-212ENST00000494658 KIF13AQ9H1H9 1805 aa31.03■■■□□ 2.56
EIF3B-212ENST00000494658 JPH4Q96JJ6 628 aa30.94■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms