RNA–Protein interactions for RNA: ENST00000572841.1

SGSM2-204, Transcript of small G protein signaling modulator 2, humanhuman

TSL 2

Gene SGSM2, Length 2,450 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM2-204ENST00000572841 NISCHQ9Y2I1 1504 aa33.94■■■■□ 3.02
SGSM2-204ENST00000572841 CCDC180Q9P1Z9 1646 aa29■■■□□ 2.23
SGSM2-204ENST00000572841 SHROOM4Q9ULL8 1493 aa28.69■■■□□ 2.18
SGSM2-204ENST00000572841 ZCCHC6Q5VYS8 1495 aaKnown RBP28.68■■■□□ 2.18
SGSM2-204ENST00000572841 SUPT5HO00267 1087 aaKnown RBP28.1■■■□□ 2.09
SGSM2-204ENST00000572841 DCAF8L2P0C7V8 631 aa28.08■■■□□ 2.09
SGSM2-204ENST00000572841 DCAF1Q9Y4B6 1507 aa27.91■■■□□ 2.06
SGSM2-204ENST00000572841 CHIC1Q5VXU3 224 aa27.29■■□□□ 1.96
SGSM2-204ENST00000572841 MYO15BQ96JP2 1530 aa27.19■■□□□ 1.94
SGSM2-204ENST00000572841 SCRIBQ14160 1630 aa27.06■■□□□ 1.92
SGSM2-204ENST00000572841 ABCC9O60706 1549 aa27.01■■□□□ 1.91
SGSM2-204ENST00000572841 NACADO15069 1562 aa26.85■■□□□ 1.89
SGSM2-204ENST00000572841 RSF1Q96T23 1441 aaPredicted RBP26.77■■□□□ 1.88
SGSM2-204ENST00000572841 LOC105371045A0A1W2PR82 267 aa26.47■■□□□ 1.83
SGSM2-204ENST00000572841 RB1CC1Q8TDY2 1594 aa26.46■■□□□ 1.83
SGSM2-204ENST00000572841 CECR2Q9BXF3 1484 aa26.45■■□□□ 1.82
SGSM2-204ENST00000572841 PCGF6Q9BYE7 350 aa26.39■■□□□ 1.81
SGSM2-204ENST00000572841 HRCP23327 699 aa26.36■■□□□ 1.81
SGSM2-204ENST00000572841 MROH2BQ7Z745 1585 aa26.35■■□□□ 1.81
SGSM2-204ENST00000572841 WIZO95785 1651 aa26.2■■□□□ 1.78
SGSM2-204ENST00000572841 TRIM41Q8WV44 630 aa26.17■■□□□ 1.78
SGSM2-204ENST00000572841 BAZ1AQ9NRL2 1556 aaPredicted RBP26.09■■□□□ 1.77
SGSM2-204ENST00000572841 UNC13AQ9UPW8 1703 aa26.02■■□□□ 1.76
SGSM2-204ENST00000572841 FAM9AQ8IZU1 332 aaPredicted RBP25.97■■□□□ 1.75
SGSM2-204ENST00000572841 TRIM26Q12899 539 aaPredicted RBP25.9■■□□□ 1.74
SGSM2-204ENST00000572841 SMARCA4P51532 1647 aa25.89■■□□□ 1.74
SGSM2-204ENST00000572841 TOP2AP11388 1531 aaKnown RBP25.82■■□□□ 1.72
SGSM2-204ENST00000572841 PPARGC1BQ86YN6 1023 aaKnown RBP25.82■■□□□ 1.72
SGSM2-204ENST00000572841 EIF4G1Q04637 1599 aaKnown RBP25.79■■□□□ 1.72
SGSM2-204ENST00000572841 EHMT2Q96KQ7 1210 aa25.75■■□□□ 1.71
SGSM2-204ENST00000572841 BICRAQ9NZM4 1560 aa25.72■■□□□ 1.71
SGSM2-204ENST00000572841 PABPN1Q86U42 306 aaKnown RBP eCLIP25.7■■□□□ 1.73e-6■■■□□ 15.7
SGSM2-204ENST00000572841 CCDC88BA6NC98 1476 aa25.68■■□□□ 1.7
SGSM2-204ENST00000572841 SMARCA2P51531 1590 aa25.66■■□□□ 1.7
SGSM2-204ENST00000572841 ABCC8Q09428 1581 aa25.51■■□□□ 1.67
SGSM2-204ENST00000572841 PEG3Q9GZU2 1588 aa25.44■■□□□ 1.66
SGSM2-204ENST00000572841 ZEB1P37275 1124 aaPredicted RBP25.31■■□□□ 1.64
SGSM2-204ENST00000572841 ATAD2BQ9ULI0 1458 aa25.27■■□□□ 1.64
SGSM2-204ENST00000572841 SOGA1O94964 1423 aa25.24■■□□□ 1.63
SGSM2-204ENST00000572841 BAZ1BQ9UIG0 1483 aaKnown RBP25.19■■□□□ 1.62
SGSM2-204ENST00000572841 EEA1Q15075 1411 aa25.15■■□□□ 1.62
SGSM2-204ENST00000572841 WRNQ14191 1432 aaPredicted RBP eCLIP25.14■■□□□ 1.62
SGSM2-204ENST00000572841 RUSC2Q8N2Y8 1516 aa25.12■■□□□ 1.61
SGSM2-204ENST00000572841 CSRNP3Q8WYN3 585 aa25.1■■□□□ 1.61
SGSM2-204ENST00000572841 CEP162Q5TB80 1403 aa25.06■■□□□ 1.6
SGSM2-204ENST00000572841 TNIKQ9UKE5 1360 aa25.05■■□□□ 1.6
SGSM2-204ENST00000572841 SYNJ1O43426 1573 aa25.03■■□□□ 1.6
SGSM2-204ENST00000572841 UBTFP17480 764 aaKnown RBP24.95■■□□□ 1.59
SGSM2-204ENST00000572841 GOLGA3Q08378 1498 aa24.94■■□□□ 1.58
SGSM2-204ENST00000572841 TTBK1Q5TCY1 1321 aaPredicted RBP24.91■■□□□ 1.58
SGSM2-204ENST00000572841 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.89■■□□□ 1.57
SGSM2-204ENST00000572841 NCAPD3P42695 1498 aa24.84■■□□□ 1.57
SGSM2-204ENST00000572841 HMGXB3Q12766 1538 aa24.83■■□□□ 1.56
SGSM2-204ENST00000572841 CCER1Q8TC90 406 aaPredicted RBP24.83■■□□□ 1.56
SGSM2-204ENST00000572841 CEP164Q9UPV0 1460 aa24.82■■□□□ 1.56
SGSM2-204ENST00000572841 KIF21BO75037 1637 aa24.81■■□□□ 1.56
SGSM2-204ENST00000572841 TOP2BQ02880 1626 aa24.77■■□□□ 1.56
SGSM2-204ENST00000572841 BIVM-ERCC5R4GMW8 1640 aa24.69■■□□□ 1.54
SGSM2-204ENST00000572841 RAPGEF2Q9Y4G8 1499 aa24.64■■□□□ 1.54
SGSM2-204ENST00000572841 CLIP1P30622 1438 aa24.63■■□□□ 1.53
SGSM2-204ENST00000572841 CFTRP13569 1480 aa24.58■■□□□ 1.52
SGSM2-204ENST00000572841 CUX1P39880 1505 aa24.55■■□□□ 1.52
SGSM2-204ENST00000572841 VPS8Q8N3P4 1428 aa24.51■■□□□ 1.51
SGSM2-204ENST00000572841 RANGAP1P46060 587 aaPredicted RBP24.47■■□□□ 1.51
SGSM2-204ENST00000572841 PRXQ9BXM0 1461 aa24.46■■□□□ 1.51
SGSM2-204ENST00000572841 ERICH3Q5RHP9 1530 aa24.45■■□□□ 1.5
SGSM2-204ENST00000572841 KIF27Q86VH2 1401 aa24.4■■□□□ 1.5
SGSM2-204ENST00000572841 APLP2Q06481 763 aa24.39■■□□□ 1.5
SGSM2-204ENST00000572841 PRDM2Q13029 1718 aa24.38■■□□□ 1.49
SGSM2-204ENST00000572841 HNRNPUL2Q1KMD3 747 aaKnown RBP24.37■■□□□ 1.49
SGSM2-204ENST00000572841 CADPSQ9ULU8 1353 aa24.33■■□□□ 1.49
SGSM2-204ENST00000572841 DIEXFQ68CQ4 756 aaKnown RBP24.29■■□□□ 1.48
SGSM2-204ENST00000572841 CC2D2AQ9P2K1 1620 aa24.29■■□□□ 1.48
SGSM2-204ENST00000572841 ARAP1Q96P48 1450 aa24.26■■□□□ 1.47
SGSM2-204ENST00000572841 SCAF1Q9H7N4 1312 aaKnown RBP24.24■■□□□ 1.47
SGSM2-204ENST00000572841 CUX2O14529 1486 aa24.19■■□□□ 1.46
SGSM2-204ENST00000572841 IGF1RP08069 1367 aa24.15■■□□□ 1.46
SGSM2-204ENST00000572841 FGD5Q6ZNL6 1462 aa24.14■■□□□ 1.46
SGSM2-204ENST00000572841 ZNF316A6NFI3 1004 aaPredicted RBP24.14■■□□□ 1.45
SGSM2-204ENST00000572841 ARHGAP35Q9NRY4 1499 aa24.09■■□□□ 1.45
SGSM2-204ENST00000572841 FANCD2Q9BXW9 1451 aa24.09■■□□□ 1.45
SGSM2-204ENST00000572841 KANK4Q5T7N3 995 aaPredicted RBP24.07■■□□□ 1.44
SGSM2-204ENST00000572841 ACIN1Q9UKV3 1341 aaKnown RBP24.05■■□□□ 1.44
SGSM2-204ENST00000572841 CARMIL1Q5VZK9 1371 aa24.04■■□□□ 1.44
SGSM2-204ENST00000572841 NEUROD1Q13562 356 aa24.02■■□□□ 1.44
SGSM2-204ENST00000572841 DNMBPQ6XZF7 1577 aa23.96■■□□□ 1.43
SGSM2-204ENST00000572841 NESP48681 1621 aa23.95■■□□□ 1.42
SGSM2-204ENST00000572841 CENPBP07199 599 aaPredicted RBP23.93■■□□□ 1.42
SGSM2-204ENST00000572841 RRBP1Q9P2E9 1410 aaKnown RBP23.91■■□□□ 1.42
SGSM2-204ENST00000572841 TOPBP1Q92547 1522 aa23.91■■□□□ 1.42
SGSM2-204ENST00000572841 RAD54L2Q9Y4B4 1467 aa23.91■■□□□ 1.42
SGSM2-204ENST00000572841 POLA1P09884 1462 aaPredicted RBP23.89■■□□□ 1.41
SGSM2-204ENST00000572841 DHX57Q6P158 1386 aaKnown RBP23.88■■□□□ 1.41
SGSM2-204ENST00000572841 ABCA10Q8WWZ4 1543 aa23.88■■□□□ 1.41
SGSM2-204ENST00000572841 CLSPNQ9HAW4 1339 aa23.83■■□□□ 1.41
SGSM2-204ENST00000572841 CCNB3Q8WWL7 1395 aa23.82■■□□□ 1.4
SGSM2-204ENST00000572841 LAMC3Q9Y6N6 1575 aa23.81■■□□□ 1.4
SGSM2-204ENST00000572841 MAP3K1Q13233 1512 aa23.8■■□□□ 1.4
SGSM2-204ENST00000572841 TIAM1Q13009 1591 aa23.8■■□□□ 1.4
SGSM2-204ENST00000572841 MIER1Q8N108 512 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms