Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC145098.2-201ENST00000623593 3026 ntBASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 SUOX-203ENST00000394109 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 TRIM32-203ENST00000450136 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 CACNA2D2-206ENST00000479441 3453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 LINC01471-201ENST00000461398 3079 ntTSL 5 BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 ANP32E-210ENST00000629042 3054 ntTSL 5 BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 PHLPP2-204ENST00000567016 4812 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 OR2K2-202ENST00000374428 1038 ntBASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 AC102953.1-201ENST00000445345 498 ntTSL 2 BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 PIGCP1-201ENST00000527583 895 ntBASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 MIR5572-201ENST00000583188 137 ntBASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 AC012073.1-201ENST00000606114 1108 ntBASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 ZNF221-205ENST00000622072 2102 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 DHX30-207ENST00000457607 3748 ntTSL 5 BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 FAM161A-203ENST00000405894 3684 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 PPARG-206ENST00000397012 2006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 PABPC1P2-201ENST00000471997 1805 ntBASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 TBC1D3P1-201ENST00000590047 1693 ntBASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 TTC16-201ENST00000373289 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AMBRA1Q9C0C7 AC004471.2-201ENST00000609936 1514 ntTSL 3 BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 LINC00662-206ENST00000590523 2053 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 ZFP69B-201ENST00000361584 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 EPB41L2-205ENST00000445890 3677 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 AP000229.1-201ENST00000608591 1979 ntTSL 4 BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 NAB1-203ENST00000409641 2472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 AC008806.1-201ENST00000624962 2443 ntBASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 AC019109.1-201ENST00000401725 1874 ntBASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 TEKT4P2-202ENST00000559466 1312 ntBASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 DLGAP2-AS1-201ENST00000518009 1810 ntTSL 2 BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 HNRNPA1P33-201ENST00000421426 561 ntBASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 MIR3907-201ENST00000579424 151 ntBASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 AC009560.1-201ENST00000620208 434 ntBASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 AC009145.4-201ENST00000625119 1294 ntBASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 TNIP1-201ENST00000315050 2785 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 GRIK1-203ENST00000389125 3140 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 C12orf56-201ENST00000333722 3936 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 PTPRVP-205ENST00000641549 5067 ntBASIC12.47□□□□□ -0.41
AMBRA1Q9C0C7 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms