RNA–Protein interactions for RNA: ENST00000590047.1

TBC1D3P1-201, Transcript of TBC1 domain family member 3 pseudogene 1, humanhuman

BASIC

Gene TBC1D3P1, Length 1,693 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3P1-201ENST00000590047 NISCHQ9Y2I1 1504 aa31.21■■■□□ 2.59
TBC1D3P1-201ENST00000590047 CCDC180Q9P1Z9 1646 aa27.7■■■□□ 2.02
TBC1D3P1-201ENST00000590047 ABCC9O60706 1549 aa27.2■■□□□ 1.94
TBC1D3P1-201ENST00000590047 ZCCHC6Q5VYS8 1495 aaKnown RBP26.17■■□□□ 1.78
TBC1D3P1-201ENST00000590047 RB1CC1Q8TDY2 1594 aa26.16■■□□□ 1.78
TBC1D3P1-201ENST00000590047 NACADO15069 1562 aa26.15■■□□□ 1.78
TBC1D3P1-201ENST00000590047 DCAF8L2P0C7V8 631 aa26.09■■□□□ 1.77
TBC1D3P1-201ENST00000590047 MYO15BQ96JP2 1530 aa26.03■■□□□ 1.76
TBC1D3P1-201ENST00000590047 DCAF1Q9Y4B6 1507 aa25.84■■□□□ 1.73
TBC1D3P1-201ENST00000590047 PABPN1Q86U42 306 aaKnown RBP eCLIP25.45■■□□□ 1.67
TBC1D3P1-201ENST00000590047 UNC13AQ9UPW8 1703 aa25.42■■□□□ 1.66
TBC1D3P1-201ENST00000590047 SHROOM4Q9ULL8 1493 aa25.37■■□□□ 1.65
TBC1D3P1-201ENST00000590047 BICRAQ9NZM4 1560 aa25.34■■□□□ 1.65
TBC1D3P1-201ENST00000590047 SCRIBQ14160 1630 aa25.19■■□□□ 1.62
TBC1D3P1-201ENST00000590047 DNAJC5BQ9UF47 199 aa25.15■■□□□ 1.62
TBC1D3P1-201ENST00000590047 EIF4G1Q04637 1599 aaKnown RBP24.7■■□□□ 1.54
TBC1D3P1-201ENST00000590047 CC2D2AQ9P2K1 1620 aa24.6■■□□□ 1.53
TBC1D3P1-201ENST00000590047 CECR2Q9BXF3 1484 aa24.5■■□□□ 1.51
TBC1D3P1-201ENST00000590047 SUPT5HO00267 1087 aaKnown RBP24.24■■□□□ 1.47
TBC1D3P1-201ENST00000590047 NCAPD3P42695 1498 aa24.18■■□□□ 1.46
TBC1D3P1-201ENST00000590047 BAZ1AQ9NRL2 1556 aaPredicted RBP24.16■■□□□ 1.46
TBC1D3P1-201ENST00000590047 SMARCA4P51532 1647 aa24.15■■□□□ 1.46
TBC1D3P1-201ENST00000590047 MROH2BQ7Z745 1585 aa24.14■■□□□ 1.45
TBC1D3P1-201ENST00000590047 RSF1Q96T23 1441 aaPredicted RBP24.13■■□□□ 1.45
TBC1D3P1-201ENST00000590047 ATAD2BQ9ULI0 1458 aa24.12■■□□□ 1.45
TBC1D3P1-201ENST00000590047 SMARCA2P51531 1590 aa24.08■■□□□ 1.44
TBC1D3P1-201ENST00000590047 PEG3Q9GZU2 1588 aa23.98■■□□□ 1.43
TBC1D3P1-201ENST00000590047 HMGXB3Q12766 1538 aa23.97■■□□□ 1.43
TBC1D3P1-201ENST00000590047 WIZO95785 1651 aa23.91■■□□□ 1.42
TBC1D3P1-201ENST00000590047 BAZ1BQ9UIG0 1483 aaKnown RBP23.88■■□□□ 1.41
TBC1D3P1-201ENST00000590047 TOP2AP11388 1531 aaKnown RBP23.64■■□□□ 1.37
TBC1D3P1-201ENST00000590047 NESP48681 1621 aa23.5■■□□□ 1.35
TBC1D3P1-201ENST00000590047 LAMC3Q9Y6N6 1575 aa23.48■■□□□ 1.35
TBC1D3P1-201ENST00000590047 ERCC6Q03468 1493 aa23.48■■□□□ 1.35
TBC1D3P1-201ENST00000590047 CADPSQ9ULU8 1353 aa23.46■■□□□ 1.35
TBC1D3P1-201ENST00000590047 CCDC88BA6NC98 1476 aa23.42■■□□□ 1.34
TBC1D3P1-201ENST00000590047 PDS5BQ9NTI5 1447 aa23.39■■□□□ 1.34
TBC1D3P1-201ENST00000590047 CUX2O14529 1486 aa23.34■■□□□ 1.33
TBC1D3P1-201ENST00000590047 CFTRP13569 1480 aa23.27■■□□□ 1.32
TBC1D3P1-201ENST00000590047 THOC2Q8NI27 1593 aaKnown RBP23.14■■□□□ 1.3
TBC1D3P1-201ENST00000590047 KIF21AQ7Z4S6 1674 aa23.14■■□□□ 1.3
TBC1D3P1-201ENST00000590047 FANCD2Q9BXW9 1451 aa23.12■■□□□ 1.29
TBC1D3P1-201ENST00000590047 MRC2Q9UBG0 1479 aa23.09■■□□□ 1.29
TBC1D3P1-201ENST00000590047 CEP164Q9UPV0 1460 aa23.09■■□□□ 1.29
TBC1D3P1-201ENST00000590047 CHIC1Q5VXU3 224 aa23.05■■□□□ 1.28
TBC1D3P1-201ENST00000590047 WDR62O43379 1518 aa23.01■■□□□ 1.27
TBC1D3P1-201ENST00000590047 PRDM2Q13029 1718 aa22.92■■□□□ 1.26
TBC1D3P1-201ENST00000590047 URB2Q14146 1524 aaKnown RBP22.87■■□□□ 1.25
TBC1D3P1-201ENST00000590047 ABCC8Q09428 1581 aa22.86■■□□□ 1.25
TBC1D3P1-201ENST00000590047 DNAJC5Q9H3Z4 198 aa22.83■■□□□ 1.24
TBC1D3P1-201ENST00000590047 TRIM41Q8WV44 630 aa22.77■■□□□ 1.24
TBC1D3P1-201ENST00000590047 TOPBP1Q92547 1522 aa22.73■■□□□ 1.23
TBC1D3P1-201ENST00000590047 WRNQ14191 1432 aaPredicted RBP eCLIP22.71■■□□□ 1.23
TBC1D3P1-201ENST00000590047 DNMBPQ6XZF7 1577 aa22.68■■□□□ 1.22
TBC1D3P1-201ENST00000590047 IFT140Q96RY7 1462 aa22.66■■□□□ 1.22
TBC1D3P1-201ENST00000590047 SYNJ1O43426 1573 aa22.65■■□□□ 1.22
TBC1D3P1-201ENST00000590047 CUX1P39880 1505 aa22.58■■□□□ 1.21
TBC1D3P1-201ENST00000590047 TOP2BQ02880 1626 aa22.53■■□□□ 1.2
TBC1D3P1-201ENST00000590047 POLA1P09884 1462 aaPredicted RBP22.52■■□□□ 1.2
TBC1D3P1-201ENST00000590047 BIVM-ERCC5R4GMW8 1640 aa22.5■■□□□ 1.19
TBC1D3P1-201ENST00000590047 ZNF608Q9ULD9 1512 aaPredicted RBP22.49■■□□□ 1.19
TBC1D3P1-201ENST00000590047 SOGA1O94964 1423 aa22.49■■□□□ 1.19
TBC1D3P1-201ENST00000590047 TARBP1Q13395 1621 aaKnown RBP22.46■■□□□ 1.19
TBC1D3P1-201ENST00000590047 FGD5Q6ZNL6 1462 aa22.44■■□□□ 1.18
TBC1D3P1-201ENST00000590047 OSCARQ8IYS5 282 aa22.42■■□□□ 1.18
TBC1D3P1-201ENST00000590047 FAM9AQ8IZU1 332 aaPredicted RBP22.42■■□□□ 1.18
TBC1D3P1-201ENST00000590047 RAD54L2Q9Y4B4 1467 aa22.41■■□□□ 1.18
TBC1D3P1-201ENST00000590047 AQRO60306 1485 aaKnown RBP eCLIP22.38■■□□□ 1.17
TBC1D3P1-201ENST00000590047 EIF4G3O43432 1585 aaKnown RBP22.35■■□□□ 1.17
TBC1D3P1-201ENST00000590047 WDR97A6NE52 1622 aa22.35■■□□□ 1.17
TBC1D3P1-201ENST00000590047 TDRD9Q8NDG6 1382 aaKnown RBP22.34■■□□□ 1.17
TBC1D3P1-201ENST00000590047 RUSC2Q8N2Y8 1516 aa22.33■■□□□ 1.17
TBC1D3P1-201ENST00000590047 ABCA10Q8WWZ4 1543 aa22.26■■□□□ 1.15
TBC1D3P1-201ENST00000590047 GRIN2BQ13224 1484 aa22.22■■□□□ 1.15
TBC1D3P1-201ENST00000590047 GAPVD1Q14C86 1478 aa22.2■■□□□ 1.14
TBC1D3P1-201ENST00000590047 LOC105371045A0A1W2PR82 267 aa22.2■■□□□ 1.14
TBC1D3P1-201ENST00000590047 EEA1Q15075 1411 aa22.19■■□□□ 1.14
TBC1D3P1-201ENST00000590047 MAGI1Q96QZ7 1491 aaPredicted RBP22.17■■□□□ 1.14
TBC1D3P1-201ENST00000590047 FBLN2P98095 1184 aa22.16■■□□□ 1.14
TBC1D3P1-201ENST00000590047 EHMT2Q96KQ7 1210 aa22.15■■□□□ 1.14
TBC1D3P1-201ENST00000590047 CSRNP3Q8WYN3 585 aa22.14■■□□□ 1.14
TBC1D3P1-201ENST00000590047 KIF27Q86VH2 1401 aa22.14■■□□□ 1.14
TBC1D3P1-201ENST00000590047 SNAPC4Q5SXM2 1469 aa22.14■■□□□ 1.13
TBC1D3P1-201ENST00000590047 CHMP7Q8WUX9 453 aaPredicted RBP22.14■■□□□ 1.13
TBC1D3P1-201ENST00000590047 ABCA5Q8WWZ7 1642 aa22.11■■□□□ 1.13
TBC1D3P1-201ENST00000590047 SYNJ2O15056 1496 aa22.09■■□□□ 1.13
TBC1D3P1-201ENST00000590047 CHD1O14646 1710 aa22.05■■□□□ 1.12
TBC1D3P1-201ENST00000590047 PBRM1Q86U86 1689 aa22.02■■□□□ 1.12
TBC1D3P1-201ENST00000590047 IGF1RP08069 1367 aa22■■□□□ 1.11
TBC1D3P1-201ENST00000590047 ERICH3Q5RHP9 1530 aa21.99■■□□□ 1.11
TBC1D3P1-201ENST00000590047 FHAD1B1AJZ9 1412 aa21.96■■□□□ 1.11
TBC1D3P1-201ENST00000590047 PRXQ9BXM0 1461 aa21.94■■□□□ 1.1
TBC1D3P1-201ENST00000590047 KIF21BO75037 1637 aa21.94■■□□□ 1.1
TBC1D3P1-201ENST00000590047 RAPGEF2Q9Y4G8 1499 aa21.93■■□□□ 1.1
TBC1D3P1-201ENST00000590047 ARHGEF11O15085 1522 aa21.92■■□□□ 1.1
TBC1D3P1-201ENST00000590047 GOLGA3Q08378 1498 aa21.92■■□□□ 1.1
TBC1D3P1-201ENST00000590047 CLASP1Q7Z460 1538 aa21.91■■□□□ 1.1
TBC1D3P1-201ENST00000590047 GRIN2AQ12879 1464 aa21.9■■□□□ 1.1
TBC1D3P1-201ENST00000590047 RIMBP3CA6NJZ7 1639 aa21.9■■□□□ 1.1
TBC1D3P1-201ENST00000590047 RIMBP3BA6NNM3 1639 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms