RNA–Protein interactions for RNA: ENST00000389125.7

GRIK1-203, Transcript of glutamate ionotropic receptor kainate type subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GRIK1, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1-203ENST00000389125 NISCHQ9Y2I1 1504 aa26.44■■□□□ 1.82
GRIK1-203ENST00000389125 SHROOM4Q9ULL8 1493 aa22.63■■□□□ 1.21
GRIK1-203ENST00000389125 CCDC180Q9P1Z9 1646 aa22.42■■□□□ 1.18
GRIK1-203ENST00000389125 ZCCHC6Q5VYS8 1495 aaKnown RBP22.37■■□□□ 1.17
GRIK1-203ENST00000389125 SUPT5HO00267 1087 aaKnown RBP22.19■■□□□ 1.14
GRIK1-203ENST00000389125 DCAF8L2P0C7V8 631 aa22.01■■□□□ 1.11
GRIK1-203ENST00000389125 DCAF1Q9Y4B6 1507 aa21.65■■□□□ 1.06
GRIK1-203ENST00000389125 CHIC1Q5VXU3 224 aa21.54■■□□□ 1.04
GRIK1-203ENST00000389125 MYO15BQ96JP2 1530 aa21.47■■□□□ 1.03
GRIK1-203ENST00000389125 ABCC9O60706 1549 aa21.1■□□□□ 0.97
GRIK1-203ENST00000389125 SCRIBQ14160 1630 aa21.1■□□□□ 0.97
GRIK1-203ENST00000389125 RSF1Q96T23 1441 aaPredicted RBP20.95■□□□□ 0.94
GRIK1-203ENST00000389125 LOC105371045A0A1W2PR82 267 aa20.93■□□□□ 0.94
GRIK1-203ENST00000389125 PCGF6Q9BYE7 350 aa20.9■□□□□ 0.94
GRIK1-203ENST00000389125 HRCP23327 699 aa20.88■□□□□ 0.93
GRIK1-203ENST00000389125 NACADO15069 1562 aa20.76■□□□□ 0.91
GRIK1-203ENST00000389125 RB1CC1Q8TDY2 1594 aa20.73■□□□□ 0.91
GRIK1-203ENST00000389125 CECR2Q9BXF3 1484 aa20.66■□□□□ 0.9
GRIK1-203ENST00000389125 TRIM41Q8WV44 630 aa20.64■□□□□ 0.89
GRIK1-203ENST00000389125 MROH2BQ7Z745 1585 aa20.58■□□□□ 0.88
GRIK1-203ENST00000389125 FAM9AQ8IZU1 332 aaPredicted RBP20.51■□□□□ 0.87
GRIK1-203ENST00000389125 PPARGC1BQ86YN6 1023 aaKnown RBP20.49■□□□□ 0.87
GRIK1-203ENST00000389125 TRIM26Q12899 539 aaPredicted RBP20.47■□□□□ 0.87
GRIK1-203ENST00000389125 WIZO95785 1651 aa20.46■□□□□ 0.87
GRIK1-203ENST00000389125 EHMT2Q96KQ7 1210 aa20.37■□□□□ 0.85
GRIK1-203ENST00000389125 BAZ1AQ9NRL2 1556 aaPredicted RBP20.31■□□□□ 0.84
GRIK1-203ENST00000389125 EIF4G1Q04637 1599 aaKnown RBP20.16■□□□□ 0.82
GRIK1-203ENST00000389125 SMARCA4P51532 1647 aa20.13■□□□□ 0.81
GRIK1-203ENST00000389125 TOP2AP11388 1531 aaKnown RBP20.12■□□□□ 0.81
GRIK1-203ENST00000389125 UNC13AQ9UPW8 1703 aa20.1■□□□□ 0.81
GRIK1-203ENST00000389125 CCDC88BA6NC98 1476 aa20.06■□□□□ 0.8
GRIK1-203ENST00000389125 ABCC8Q09428 1581 aa20.03■□□□□ 0.8
GRIK1-203ENST00000389125 SMARCA2P51531 1590 aa20.02■□□□□ 0.8
GRIK1-203ENST00000389125 ZEB1P37275 1124 aaPredicted RBP20■□□□□ 0.79
GRIK1-203ENST00000389125 PABPN1Q86U42 306 aaKnown RBP eCLIP19.98■□□□□ 0.79
GRIK1-203ENST00000389125 BICRAQ9NZM4 1560 aa19.89■□□□□ 0.77
GRIK1-203ENST00000389125 SOGA1O94964 1423 aa19.85■□□□□ 0.77
GRIK1-203ENST00000389125 RUSC2Q8N2Y8 1516 aa19.75■□□□□ 0.75
GRIK1-203ENST00000389125 CEP162Q5TB80 1403 aa19.75■□□□□ 0.75
GRIK1-203ENST00000389125 CSRNP3Q8WYN3 585 aa19.73■□□□□ 0.75
GRIK1-203ENST00000389125 PEG3Q9GZU2 1588 aa19.71■□□□□ 0.75
GRIK1-203ENST00000389125 TTBK1Q5TCY1 1321 aaPredicted RBP19.71■□□□□ 0.75
GRIK1-203ENST00000389125 TNIKQ9UKE5 1360 aa19.7■□□□□ 0.74
GRIK1-203ENST00000389125 WRNQ14191 1432 aaPredicted RBP eCLIP19.69■□□□□ 0.74
GRIK1-203ENST00000389125 EEA1Q15075 1411 aa19.69■□□□□ 0.74
GRIK1-203ENST00000389125 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.69■□□□□ 0.74
GRIK1-203ENST00000389125 UBTFP17480 764 aaKnown RBP19.67■□□□□ 0.74
GRIK1-203ENST00000389125 ATAD2BQ9ULI0 1458 aa19.63■□□□□ 0.73
GRIK1-203ENST00000389125 CCER1Q8TC90 406 aaPredicted RBP19.63■□□□□ 0.73
GRIK1-203ENST00000389125 GOLGA3Q08378 1498 aa19.59■□□□□ 0.73
GRIK1-203ENST00000389125 BAZ1BQ9UIG0 1483 aaKnown RBP19.58■□□□□ 0.73
GRIK1-203ENST00000389125 SYNJ1O43426 1573 aa19.58■□□□□ 0.72
GRIK1-203ENST00000389125 CEP164Q9UPV0 1460 aa19.47■□□□□ 0.71
GRIK1-203ENST00000389125 KIF21BO75037 1637 aa19.43■□□□□ 0.7
GRIK1-203ENST00000389125 CLIP1P30622 1438 aa19.38■□□□□ 0.69
GRIK1-203ENST00000389125 RAPGEF2Q9Y4G8 1499 aa19.36■□□□□ 0.69
GRIK1-203ENST00000389125 RANGAP1P46060 587 aaPredicted RBP19.33■□□□□ 0.68
GRIK1-203ENST00000389125 TOP2BQ02880 1626 aa19.31■□□□□ 0.68
GRIK1-203ENST00000389125 VPS8Q8N3P4 1428 aa19.29■□□□□ 0.68
GRIK1-203ENST00000389125 HNRNPUL2Q1KMD3 747 aaKnown RBP19.25■□□□□ 0.67
GRIK1-203ENST00000389125 SCAF1Q9H7N4 1312 aaKnown RBP19.25■□□□□ 0.67
GRIK1-203ENST00000389125 DIEXFQ68CQ4 756 aaKnown RBP19.23■□□□□ 0.67
GRIK1-203ENST00000389125 NCAPD3P42695 1498 aa19.23■□□□□ 0.67
GRIK1-203ENST00000389125 BIVM-ERCC5R4GMW8 1640 aa19.23■□□□□ 0.67
GRIK1-203ENST00000389125 APLP2Q06481 763 aa19.22■□□□□ 0.67
GRIK1-203ENST00000389125 HMGXB3Q12766 1538 aa19.21■□□□□ 0.67
GRIK1-203ENST00000389125 CUX1P39880 1505 aa19.15■□□□□ 0.66
GRIK1-203ENST00000389125 PRXQ9BXM0 1461 aa19.14■□□□□ 0.66
GRIK1-203ENST00000389125 ERICH3Q5RHP9 1530 aa19.12■□□□□ 0.65
GRIK1-203ENST00000389125 CFTRP13569 1480 aa19.09■□□□□ 0.65
GRIK1-203ENST00000389125 ZNF316A6NFI3 1004 aaPredicted RBP19.08■□□□□ 0.65
GRIK1-203ENST00000389125 KIF27Q86VH2 1401 aa19.06■□□□□ 0.64
GRIK1-203ENST00000389125 ARAP1Q96P48 1450 aa19.06■□□□□ 0.64
GRIK1-203ENST00000389125 ACIN1Q9UKV3 1341 aaKnown RBP19.06■□□□□ 0.64
GRIK1-203ENST00000389125 NEUROD1Q13562 356 aa19.05■□□□□ 0.64
GRIK1-203ENST00000389125 KANK4Q5T7N3 995 aaPredicted RBP18.99■□□□□ 0.63
GRIK1-203ENST00000389125 CENPBP07199 599 aaPredicted RBP18.94■□□□□ 0.62
GRIK1-203ENST00000389125 CUX2O14529 1486 aa18.9■□□□□ 0.62
GRIK1-203ENST00000389125 ARHGAP35Q9NRY4 1499 aa18.9■□□□□ 0.62
GRIK1-203ENST00000389125 CADPSQ9ULU8 1353 aa18.88■□□□□ 0.61
GRIK1-203ENST00000389125 IGF1RP08069 1367 aa18.87■□□□□ 0.61
GRIK1-203ENST00000389125 PRDM2Q13029 1718 aa18.86■□□□□ 0.61
GRIK1-203ENST00000389125 GTF3C3Q9Y5Q9 886 aa18.85■□□□□ 0.61
GRIK1-203ENST00000389125 DHX57Q6P158 1386 aaKnown RBP18.84■□□□□ 0.61
GRIK1-203ENST00000389125 MIER1Q8N108 512 aa18.83■□□□□ 0.6
GRIK1-203ENST00000389125 RRBP1Q9P2E9 1410 aaKnown RBP18.83■□□□□ 0.6
GRIK1-203ENST00000389125 YTHDC1Q96MU7 727 aaKnown RBP18.82■□□□□ 0.6
GRIK1-203ENST00000389125 FGD5Q6ZNL6 1462 aa18.82■□□□□ 0.6
GRIK1-203ENST00000389125 CARMIL1Q5VZK9 1371 aa18.79■□□□□ 0.6
GRIK1-203ENST00000389125 CLSPNQ9HAW4 1339 aa18.78■□□□□ 0.6
GRIK1-203ENST00000389125 CCNB3Q8WWL7 1395 aa18.77■□□□□ 0.6
GRIK1-203ENST00000389125 ITGAEP38570 1179 aa18.76■□□□□ 0.59
GRIK1-203ENST00000389125 CC2D2AQ9P2K1 1620 aa18.75■□□□□ 0.59
GRIK1-203ENST00000389125 PELP1Q8IZL8 1130 aaKnown RBP18.75■□□□□ 0.59
GRIK1-203ENST00000389125 FANCD2Q9BXW9 1451 aa18.71■□□□□ 0.59
GRIK1-203ENST00000389125 TIAM1Q13009 1591 aa18.68■□□□□ 0.58
GRIK1-203ENST00000389125 P3H3Q8IVL6 736 aa18.66■□□□□ 0.58
GRIK1-203ENST00000389125 RAD54L2Q9Y4B4 1467 aa18.65■□□□□ 0.58
GRIK1-203ENST00000389125 MAP3K1Q13233 1512 aa18.62■□□□□ 0.57
GRIK1-203ENST00000389125 LRRC9Q6ZRR7 1453 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms