RNA–Protein interactions for RNA: ENST00000461398.3

LINC01471-201, Transcript of long intergenic non-protein coding RNA 1471, humanhuman

TSL 5 BASIC

Gene LINC01471, Length 3,079 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01471-201ENST00000461398 NISCHQ9Y2I1 1504 aa26.72■■□□□ 1.87
LINC01471-201ENST00000461398 SHROOM4Q9ULL8 1493 aa23.33■■□□□ 1.33
LINC01471-201ENST00000461398 DCAF8L2P0C7V8 631 aa22.99■■□□□ 1.27
LINC01471-201ENST00000461398 SUPT5HO00267 1087 aaKnown RBP22.8■■□□□ 1.24
LINC01471-201ENST00000461398 ZCCHC6Q5VYS8 1495 aaKnown RBP22.5■■□□□ 1.19
LINC01471-201ENST00000461398 CCDC180Q9P1Z9 1646 aa22.49■■□□□ 1.19
LINC01471-201ENST00000461398 CHIC1Q5VXU3 224 aa21.8■■□□□ 1.08
LINC01471-201ENST00000461398 MYO15BQ96JP2 1530 aa21.69■■□□□ 1.06
LINC01471-201ENST00000461398 ABCC9O60706 1549 aa21.62■■□□□ 1.05
LINC01471-201ENST00000461398 DCAF1Q9Y4B6 1507 aa21.6■■□□□ 1.05
LINC01471-201ENST00000461398 SCRIBQ14160 1630 aa21.55■■□□□ 1.04
LINC01471-201ENST00000461398 LOC105371045A0A1W2PR82 267 aa21.43■■□□□ 1.02
LINC01471-201ENST00000461398 EHMT2Q96KQ7 1210 aa21.28■■□□□ 1
LINC01471-201ENST00000461398 PCGF6Q9BYE7 350 aa21.21■□□□□ 0.99
LINC01471-201ENST00000461398 RSF1Q96T23 1441 aaPredicted RBP21.21■□□□□ 0.99
LINC01471-201ENST00000461398 FAM9AQ8IZU1 332 aaPredicted RBP21.19■□□□□ 0.98
LINC01471-201ENST00000461398 CECR2Q9BXF3 1484 aa21.11■□□□□ 0.97
LINC01471-201ENST00000461398 TRIM41Q8WV44 630 aa21.04■□□□□ 0.96
LINC01471-201ENST00000461398 RB1CC1Q8TDY2 1594 aa21.02■□□□□ 0.95
LINC01471-201ENST00000461398 NACADO15069 1562 aa20.95■□□□□ 0.94
LINC01471-201ENST00000461398 MROH2BQ7Z745 1585 aa20.92■□□□□ 0.94
LINC01471-201ENST00000461398 PABPN1Q86U42 306 aaKnown RBP eCLIP20.85■□□□□ 0.93
LINC01471-201ENST00000461398 WIZO95785 1651 aa20.81■□□□□ 0.92
LINC01471-201ENST00000461398 HRCP23327 699 aa20.8■□□□□ 0.92
LINC01471-201ENST00000461398 PPARGC1BQ86YN6 1023 aaKnown RBP20.8■□□□□ 0.92
LINC01471-201ENST00000461398 TRIM26Q12899 539 aaPredicted RBP20.52■□□□□ 0.88
LINC01471-201ENST00000461398 TTBK1Q5TCY1 1321 aaPredicted RBP20.48■□□□□ 0.87
LINC01471-201ENST00000461398 UNC13AQ9UPW8 1703 aa20.48■□□□□ 0.87
LINC01471-201ENST00000461398 BAZ1AQ9NRL2 1556 aaPredicted RBP20.48■□□□□ 0.87
LINC01471-201ENST00000461398 ABCC8Q09428 1581 aa20.41■□□□□ 0.86
LINC01471-201ENST00000461398 CCDC88BA6NC98 1476 aa20.37■□□□□ 0.85
LINC01471-201ENST00000461398 SMARCA4P51532 1647 aa20.37■□□□□ 0.85
LINC01471-201ENST00000461398 TOP2AP11388 1531 aaKnown RBP20.26■□□□□ 0.83
LINC01471-201ENST00000461398 BICRAQ9NZM4 1560 aa20.25■□□□□ 0.83
LINC01471-201ENST00000461398 SMARCA2P51531 1590 aa20.23■□□□□ 0.83
LINC01471-201ENST00000461398 SOGA1O94964 1423 aa20.2■□□□□ 0.82
LINC01471-201ENST00000461398 EIF4G1Q04637 1599 aaKnown RBP20.16■□□□□ 0.82
LINC01471-201ENST00000461398 RANGAP1P46060 587 aaPredicted RBP20.16■□□□□ 0.82
LINC01471-201ENST00000461398 RUSC2Q8N2Y8 1516 aa20.16■□□□□ 0.82
LINC01471-201ENST00000461398 UBTFP17480 764 aaKnown RBP20.16■□□□□ 0.82
LINC01471-201ENST00000461398 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.07■□□□□ 0.8
LINC01471-201ENST00000461398 CSRNP3Q8WYN3 585 aa20.03■□□□□ 0.8
LINC01471-201ENST00000461398 ATAD2BQ9ULI0 1458 aa19.96■□□□□ 0.79
LINC01471-201ENST00000461398 WRNQ14191 1432 aaPredicted RBP eCLIP19.94■□□□□ 0.78
LINC01471-201ENST00000461398 BAZ1BQ9UIG0 1483 aaKnown RBP19.93■□□□□ 0.78
LINC01471-201ENST00000461398 CEP162Q5TB80 1403 aa19.93■□□□□ 0.78
LINC01471-201ENST00000461398 CCER1Q8TC90 406 aaPredicted RBP19.89■□□□□ 0.77
LINC01471-201ENST00000461398 SYNJ1O43426 1573 aa19.83■□□□□ 0.77
LINC01471-201ENST00000461398 ZEB1P37275 1124 aaPredicted RBP19.8■□□□□ 0.76
LINC01471-201ENST00000461398 TNIKQ9UKE5 1360 aa19.77■□□□□ 0.76
LINC01471-201ENST00000461398 PEG3Q9GZU2 1588 aa19.77■□□□□ 0.75
LINC01471-201ENST00000461398 HNRNPUL2Q1KMD3 747 aaKnown RBP19.71■□□□□ 0.75
LINC01471-201ENST00000461398 GOLGA3Q08378 1498 aa19.69■□□□□ 0.74
LINC01471-201ENST00000461398 RAPGEF2Q9Y4G8 1499 aa19.65■□□□□ 0.74
LINC01471-201ENST00000461398 EEA1Q15075 1411 aa19.65■□□□□ 0.74
LINC01471-201ENST00000461398 CLIP1P30622 1438 aa19.6■□□□□ 0.73
LINC01471-201ENST00000461398 CEP164Q9UPV0 1460 aa19.57■□□□□ 0.72
LINC01471-201ENST00000461398 APLP2Q06481 763 aa19.55■□□□□ 0.72
LINC01471-201ENST00000461398 NCAPD3P42695 1498 aa19.48■□□□□ 0.71
LINC01471-201ENST00000461398 TOP2BQ02880 1626 aa19.44■□□□□ 0.7
LINC01471-201ENST00000461398 CUX1P39880 1505 aa19.43■□□□□ 0.7
LINC01471-201ENST00000461398 KIF21BO75037 1637 aa19.41■□□□□ 0.7
LINC01471-201ENST00000461398 KANK4Q5T7N3 995 aaPredicted RBP19.39■□□□□ 0.69
LINC01471-201ENST00000461398 VPS8Q8N3P4 1428 aa19.38■□□□□ 0.69
LINC01471-201ENST00000461398 ITGAEP38570 1179 aa19.37■□□□□ 0.69
LINC01471-201ENST00000461398 HMGXB3Q12766 1538 aa19.35■□□□□ 0.69
LINC01471-201ENST00000461398 P3H3Q8IVL6 736 aa19.34■□□□□ 0.69
LINC01471-201ENST00000461398 CFTRP13569 1480 aa19.33■□□□□ 0.69
LINC01471-201ENST00000461398 DIEXFQ68CQ4 756 aaKnown RBP19.33■□□□□ 0.69
LINC01471-201ENST00000461398 DNAJC5BQ9UF47 199 aa19.32■□□□□ 0.68
LINC01471-201ENST00000461398 ATP1B4Q9UN42 357 aaPredicted RBP19.31■□□□□ 0.68
LINC01471-201ENST00000461398 KIF27Q86VH2 1401 aa19.3■□□□□ 0.68
LINC01471-201ENST00000461398 BIVM-ERCC5R4GMW8 1640 aa19.29■□□□□ 0.68
LINC01471-201ENST00000461398 PRXQ9BXM0 1461 aa19.27■□□□□ 0.68
LINC01471-201ENST00000461398 CUX2O14529 1486 aa19.27■□□□□ 0.68
LINC01471-201ENST00000461398 ARAP1Q96P48 1450 aa19.25■□□□□ 0.67
LINC01471-201ENST00000461398 CADPSQ9ULU8 1353 aa19.24■□□□□ 0.67
LINC01471-201ENST00000461398 CC2D2AQ9P2K1 1620 aa19.23■□□□□ 0.67
LINC01471-201ENST00000461398 SCAF1Q9H7N4 1312 aaKnown RBP19.21■□□□□ 0.67
LINC01471-201ENST00000461398 NESP48681 1621 aa19.2■□□□□ 0.66
LINC01471-201ENST00000461398 IGF1RP08069 1367 aa19.18■□□□□ 0.66
LINC01471-201ENST00000461398 YTHDC1Q96MU7 727 aaKnown RBP19.17■□□□□ 0.66
LINC01471-201ENST00000461398 FGD5Q6ZNL6 1462 aa19.16■□□□□ 0.66
LINC01471-201ENST00000461398 PELP1Q8IZL8 1130 aaKnown RBP19.15■□□□□ 0.66
LINC01471-201ENST00000461398 ZNF316A6NFI3 1004 aaPredicted RBP19.13■□□□□ 0.65
LINC01471-201ENST00000461398 RAD54L2Q9Y4B4 1467 aa19.13■□□□□ 0.65
LINC01471-201ENST00000461398 NEUROD1Q13562 356 aa19.12■□□□□ 0.65
LINC01471-201ENST00000461398 CARMIL1Q5VZK9 1371 aa19.12■□□□□ 0.65
LINC01471-201ENST00000461398 ERICH3Q5RHP9 1530 aa19.11■□□□□ 0.65
LINC01471-201ENST00000461398 ARHGAP35Q9NRY4 1499 aa19.11■□□□□ 0.65
LINC01471-201ENST00000461398 FANCD2Q9BXW9 1451 aa19.09■□□□□ 0.65
LINC01471-201ENST00000461398 FAM50AQ14320 339 aaKnown RBP19.02■□□□□ 0.63
LINC01471-201ENST00000461398 MIER1Q8N108 512 aa19.01■□□□□ 0.63
LINC01471-201ENST00000461398 TDRD9Q8NDG6 1382 aaKnown RBP18.99■□□□□ 0.63
LINC01471-201ENST00000461398 ACIN1Q9UKV3 1341 aaKnown RBP18.96■□□□□ 0.63
LINC01471-201ENST00000461398 DHX57Q6P158 1386 aaKnown RBP18.94■□□□□ 0.62
LINC01471-201ENST00000461398 FHOD3Q2V2M9 1422 aa18.94■□□□□ 0.62
LINC01471-201ENST00000461398 CCNB3Q8WWL7 1395 aa18.93■□□□□ 0.62
LINC01471-201ENST00000461398 POLA1P09884 1462 aaPredicted RBP18.93■□□□□ 0.62
LINC01471-201ENST00000461398 ARID3CA6NKF2 412 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms