RNA–Protein interactions for RNA: ENST00000333722.9

C12orf56-201, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 1 (best) BASIC

Gene C12orf56, Length 3,936 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-201ENST00000333722 NISCHQ9Y2I1 1504 aa25.82■■□□□ 1.72
C12orf56-201ENST00000333722 DCAF8L2P0C7V8 631 aa23.84■■□□□ 1.41
C12orf56-201ENST00000333722 SHROOM4Q9ULL8 1493 aa23.44■■□□□ 1.34
C12orf56-201ENST00000333722 SUPT5HO00267 1087 aaKnown RBP23.12■■□□□ 1.29
C12orf56-201ENST00000333722 EHMT2Q96KQ7 1210 aa21.94■■□□□ 1.1
C12orf56-201ENST00000333722 FAM9AQ8IZU1 332 aaPredicted RBP21.63■■□□□ 1.05
C12orf56-201ENST00000333722 ABCC9O60706 1549 aa21.58■■□□□ 1.05
C12orf56-201ENST00000333722 ZCCHC6Q5VYS8 1495 aaKnown RBP21.58■■□□□ 1.05
C12orf56-201ENST00000333722 CHIC1Q5VXU3 224 aa21.49■■□□□ 1.03
C12orf56-201ENST00000333722 CCDC180Q9P1Z9 1646 aa21.35■■□□□ 1.01
C12orf56-201ENST00000333722 LOC105371045A0A1W2PR82 267 aa21.35■■□□□ 1.01
C12orf56-201ENST00000333722 PCGF6Q9BYE7 350 aa21.3■■□□□ 1
C12orf56-201ENST00000333722 TRIM41Q8WV44 630 aa21.26■□□□□ 0.99
C12orf56-201ENST00000333722 PABPN1Q86U42 306 aaKnown RBP eCLIP21.11■□□□□ 0.97
C12orf56-201ENST00000333722 TTBK1Q5TCY1 1321 aaPredicted RBP21.07■□□□□ 0.96
C12orf56-201ENST00000333722 SCRIBQ14160 1630 aa21.03■□□□□ 0.96
C12orf56-201ENST00000333722 PPARGC1BQ86YN6 1023 aaKnown RBP20.98■□□□□ 0.95
C12orf56-201ENST00000333722 RANGAP1P46060 587 aaPredicted RBP20.85■□□□□ 0.93
C12orf56-201ENST00000333722 MYO15BQ96JP2 1530 aa20.8■□□□□ 0.92
C12orf56-201ENST00000333722 RSF1Q96T23 1441 aaPredicted RBP20.61■□□□□ 0.89
C12orf56-201ENST00000333722 UBTFP17480 764 aaKnown RBP20.6■□□□□ 0.89
C12orf56-201ENST00000333722 DCAF1Q9Y4B6 1507 aa20.55■□□□□ 0.88
C12orf56-201ENST00000333722 CECR2Q9BXF3 1484 aa20.54■□□□□ 0.88
C12orf56-201ENST00000333722 HRCP23327 699 aa20.46■□□□□ 0.87
C12orf56-201ENST00000333722 TRIM26Q12899 539 aaPredicted RBP20.43■□□□□ 0.86
C12orf56-201ENST00000333722 NACADO15069 1562 aa20.3■□□□□ 0.84
C12orf56-201ENST00000333722 APLP2Q06481 763 aa20.26■□□□□ 0.83
C12orf56-201ENST00000333722 MROH2BQ7Z745 1585 aa20.24■□□□□ 0.83
C12orf56-201ENST00000333722 RB1CC1Q8TDY2 1594 aa20.23■□□□□ 0.83
C12orf56-201ENST00000333722 CCER1Q8TC90 406 aaPredicted RBP20.22■□□□□ 0.83
C12orf56-201ENST00000333722 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.12■□□□□ 0.81
C12orf56-201ENST00000333722 ATP1B4Q9UN42 357 aaPredicted RBP20.11■□□□□ 0.81
C12orf56-201ENST00000333722 HNRNPUL2Q1KMD3 747 aaKnown RBP20.02■□□□□ 0.8
C12orf56-201ENST00000333722 CSRNP3Q8WYN3 585 aa20.01■□□□□ 0.79
C12orf56-201ENST00000333722 WIZO95785 1651 aa20■□□□□ 0.79
C12orf56-201ENST00000333722 ITGAEP38570 1179 aa19.91■□□□□ 0.78
C12orf56-201ENST00000333722 BAZ1AQ9NRL2 1556 aaPredicted RBP19.89■□□□□ 0.78
C12orf56-201ENST00000333722 ZEB1P37275 1124 aaPredicted RBP19.89■□□□□ 0.77
C12orf56-201ENST00000333722 ABCC8Q09428 1581 aa19.83■□□□□ 0.76
C12orf56-201ENST00000333722 CCDC88BA6NC98 1476 aa19.82■□□□□ 0.76
C12orf56-201ENST00000333722 SOGA1O94964 1423 aa19.78■□□□□ 0.76
C12orf56-201ENST00000333722 P3H3Q8IVL6 736 aa19.7■□□□□ 0.74
C12orf56-201ENST00000333722 BAZ1BQ9UIG0 1483 aaKnown RBP19.68■□□□□ 0.74
C12orf56-201ENST00000333722 WRNQ14191 1432 aaPredicted RBP eCLIP19.65■□□□□ 0.74
C12orf56-201ENST00000333722 SMARCA4P51532 1647 aa19.58■□□□□ 0.72
C12orf56-201ENST00000333722 RUSC2Q8N2Y8 1516 aa19.58■□□□□ 0.72
C12orf56-201ENST00000333722 YTHDC1Q96MU7 727 aaKnown RBP19.57■□□□□ 0.72
C12orf56-201ENST00000333722 CEP162Q5TB80 1403 aa19.56■□□□□ 0.72
C12orf56-201ENST00000333722 TOP2AP11388 1531 aaKnown RBP19.54■□□□□ 0.72
C12orf56-201ENST00000333722 ARID3CA6NKF2 412 aa19.46■□□□□ 0.71
C12orf56-201ENST00000333722 ATAD2BQ9ULI0 1458 aa19.46■□□□□ 0.71
C12orf56-201ENST00000333722 FAM50AQ14320 339 aaKnown RBP19.43■□□□□ 0.7
C12orf56-201ENST00000333722 CLIP1P30622 1438 aa19.41■□□□□ 0.7
C12orf56-201ENST00000333722 SMARCA2P51531 1590 aa19.4■□□□□ 0.7
C12orf56-201ENST00000333722 TNIKQ9UKE5 1360 aa19.38■□□□□ 0.69
C12orf56-201ENST00000333722 DIEXFQ68CQ4 756 aaKnown RBP19.36■□□□□ 0.69
C12orf56-201ENST00000333722 GOLGA3Q08378 1498 aa19.35■□□□□ 0.69
C12orf56-201ENST00000333722 BICRAQ9NZM4 1560 aa19.28■□□□□ 0.68
C12orf56-201ENST00000333722 FBLN2P98095 1184 aa19.27■□□□□ 0.68
C12orf56-201ENST00000333722 EEA1Q15075 1411 aa19.27■□□□□ 0.68
C12orf56-201ENST00000333722 NEUROD1Q13562 356 aa19.24■□□□□ 0.67
C12orf56-201ENST00000333722 CEP164Q9UPV0 1460 aa19.22■□□□□ 0.67
C12orf56-201ENST00000333722 RAPGEF2Q9Y4G8 1499 aa19.18■□□□□ 0.66
C12orf56-201ENST00000333722 KANK4Q5T7N3 995 aaPredicted RBP19.17■□□□□ 0.66
C12orf56-201ENST00000333722 CENPBP07199 599 aaPredicted RBP19.16■□□□□ 0.66
C12orf56-201ENST00000333722 UNC13AQ9UPW8 1703 aa19.16■□□□□ 0.66
C12orf56-201ENST00000333722 KIF27Q86VH2 1401 aa19.15■□□□□ 0.66
C12orf56-201ENST00000333722 CUX2O14529 1486 aa19.12■□□□□ 0.65
C12orf56-201ENST00000333722 DNAJC5BQ9UF47 199 aa19.1■□□□□ 0.65
C12orf56-201ENST00000333722 ZNF316A6NFI3 1004 aaPredicted RBP19.1■□□□□ 0.65
C12orf56-201ENST00000333722 SYNJ1O43426 1573 aa19.05■□□□□ 0.64
C12orf56-201ENST00000333722 EIF4G1Q04637 1599 aaKnown RBP19.04■□□□□ 0.64
C12orf56-201ENST00000333722 CNGB1Q14028 1251 aaPredicted RBP19.03■□□□□ 0.64
C12orf56-201ENST00000333722 CADPSQ9ULU8 1353 aa19.02■□□□□ 0.64
C12orf56-201ENST00000333722 CARMIL1Q5VZK9 1371 aa19.01■□□□□ 0.63
C12orf56-201ENST00000333722 TDRD9Q8NDG6 1382 aaKnown RBP18.99■□□□□ 0.63
C12orf56-201ENST00000333722 TRIM52Q96A61 297 aa18.98■□□□□ 0.63
C12orf56-201ENST00000333722 VPS8Q8N3P4 1428 aa18.98■□□□□ 0.63
C12orf56-201ENST00000333722 CHIC2Q9UKJ5 165 aa18.97■□□□□ 0.63
C12orf56-201ENST00000333722 NCAPD3P42695 1498 aa18.96■□□□□ 0.63
C12orf56-201ENST00000333722 HIRIP3Q9BW71 556 aaPredicted RBP18.94■□□□□ 0.62
C12orf56-201ENST00000333722 POLR3GLQ9BT43 218 aa18.88■□□□□ 0.61
C12orf56-201ENST00000333722 ZNF777Q9ULD5 760 aaPredicted RBP18.88■□□□□ 0.61
C12orf56-201ENST00000333722 GTF3C3Q9Y5Q9 886 aa18.87■□□□□ 0.61
C12orf56-201ENST00000333722 MIER1Q8N108 512 aa18.87■□□□□ 0.61
C12orf56-201ENST00000333722 NESP48681 1621 aa18.85■□□□□ 0.61
C12orf56-201ENST00000333722 RAD54L2Q9Y4B4 1467 aa18.84■□□□□ 0.61
C12orf56-201ENST00000333722 IGF1RP08069 1367 aa18.83■□□□□ 0.6
C12orf56-201ENST00000333722 SIN3AQ96ST3 1273 aa18.82■□□□□ 0.6
C12orf56-201ENST00000333722 MTUS2Q5JR59 1369 aa18.81■□□□□ 0.6
C12orf56-201ENST00000333722 FANCD2Q9BXW9 1451 aa18.81■□□□□ 0.6
C12orf56-201ENST00000333722 RRP7BPQ9NSQ0 103 aa18.8■□□□□ 0.6
C12orf56-201ENST00000333722 CFTRP13569 1480 aa18.77■□□□□ 0.6
C12orf56-201ENST00000333722 CUX1P39880 1505 aa18.77■□□□□ 0.6
C12orf56-201ENST00000333722 FGD5Q6ZNL6 1462 aa18.77■□□□□ 0.6
C12orf56-201ENST00000333722 SCAF1Q9H7N4 1312 aaKnown RBP18.77■□□□□ 0.6
C12orf56-201ENST00000333722 ACIN1Q9UKV3 1341 aaKnown RBP18.77■□□□□ 0.6
C12orf56-201ENST00000333722 CHMP7Q8WUX9 453 aaPredicted RBP18.76■□□□□ 0.59
C12orf56-201ENST00000333722 ZNF326Q5BKZ1 582 aaKnown RBP18.75■□□□□ 0.59
C12orf56-201ENST00000333722 FHOD3Q2V2M9 1422 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms