RNA–Protein interactions for RNA: ENST00000471997.1

PABPC1P2-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 2, humanhuman

BASIC

Gene PABPC1P2, Length 1,805 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P2-201ENST00000471997 NISCHQ9Y2I1 1504 aa30.26■■■□□ 2.43
PABPC1P2-201ENST00000471997 CCDC180Q9P1Z9 1646 aa26.78■■□□□ 1.88
PABPC1P2-201ENST00000471997 ABCC9O60706 1549 aa25.85■■□□□ 1.73
PABPC1P2-201ENST00000471997 ZCCHC6Q5VYS8 1495 aaKnown RBP25.26■■□□□ 1.63
PABPC1P2-201ENST00000471997 DCAF8L2P0C7V8 631 aa25.18■■□□□ 1.62
PABPC1P2-201ENST00000471997 NACADO15069 1562 aa25.11■■□□□ 1.61
PABPC1P2-201ENST00000471997 DCAF1Q9Y4B6 1507 aa25.08■■□□□ 1.6
PABPC1P2-201ENST00000471997 MYO15BQ96JP2 1530 aa25.07■■□□□ 1.6
PABPC1P2-201ENST00000471997 RB1CC1Q8TDY2 1594 aa25.05■■□□□ 1.6
PABPC1P2-201ENST00000471997 UNC13AQ9UPW8 1703 aa24.44■■□□□ 1.5
PABPC1P2-201ENST00000471997 SCRIBQ14160 1630 aa24.41■■□□□ 1.5
PABPC1P2-201ENST00000471997 BICRAQ9NZM4 1560 aa24.22■■□□□ 1.47
PABPC1P2-201ENST00000471997 PABPN1Q86U42 306 aaKnown RBP eCLIP24.21■■□□□ 1.47
PABPC1P2-201ENST00000471997 SHROOM4Q9ULL8 1493 aa24.2■■□□□ 1.47
PABPC1P2-201ENST00000471997 EIF4G1Q04637 1599 aaKnown RBP23.58■■□□□ 1.37
PABPC1P2-201ENST00000471997 CECR2Q9BXF3 1484 aa23.5■■□□□ 1.35
PABPC1P2-201ENST00000471997 BAZ1AQ9NRL2 1556 aaPredicted RBP23.45■■□□□ 1.34
PABPC1P2-201ENST00000471997 DNAJC5BQ9UF47 199 aa23.4■■□□□ 1.34
PABPC1P2-201ENST00000471997 SMARCA4P51532 1647 aa23.4■■□□□ 1.34
PABPC1P2-201ENST00000471997 CC2D2AQ9P2K1 1620 aa23.4■■□□□ 1.34
PABPC1P2-201ENST00000471997 SUPT5HO00267 1087 aaKnown RBP23.4■■□□□ 1.34
PABPC1P2-201ENST00000471997 MROH2BQ7Z745 1585 aa23.3■■□□□ 1.32
PABPC1P2-201ENST00000471997 SMARCA2P51531 1590 aa23.22■■□□□ 1.31
PABPC1P2-201ENST00000471997 ATAD2BQ9ULI0 1458 aa23.2■■□□□ 1.3
PABPC1P2-201ENST00000471997 PEG3Q9GZU2 1588 aa23.18■■□□□ 1.3
PABPC1P2-201ENST00000471997 RSF1Q96T23 1441 aaPredicted RBP23.17■■□□□ 1.3
PABPC1P2-201ENST00000471997 NCAPD3P42695 1498 aa23.15■■□□□ 1.3
PABPC1P2-201ENST00000471997 WIZO95785 1651 aa23.06■■□□□ 1.28
PABPC1P2-201ENST00000471997 HMGXB3Q12766 1538 aa23.06■■□□□ 1.28
PABPC1P2-201ENST00000471997 BAZ1BQ9UIG0 1483 aaKnown RBP23.04■■□□□ 1.28
PABPC1P2-201ENST00000471997 TOP2AP11388 1531 aaKnown RBP22.87■■□□□ 1.25
PABPC1P2-201ENST00000471997 CCDC88BA6NC98 1476 aa22.59■■□□□ 1.21
PABPC1P2-201ENST00000471997 CHIC1Q5VXU3 224 aa22.57■■□□□ 1.2
PABPC1P2-201ENST00000471997 CADPSQ9ULU8 1353 aa22.5■■□□□ 1.19
PABPC1P2-201ENST00000471997 LAMC3Q9Y6N6 1575 aa22.49■■□□□ 1.19
PABPC1P2-201ENST00000471997 NESP48681 1621 aa22.44■■□□□ 1.18
PABPC1P2-201ENST00000471997 CFTRP13569 1480 aa22.42■■□□□ 1.18
PABPC1P2-201ENST00000471997 PDS5BQ9NTI5 1447 aa22.35■■□□□ 1.17
PABPC1P2-201ENST00000471997 PRDM2Q13029 1718 aa22.29■■□□□ 1.16
PABPC1P2-201ENST00000471997 ERCC6Q03468 1493 aa22.29■■□□□ 1.16
PABPC1P2-201ENST00000471997 FANCD2Q9BXW9 1451 aa22.22■■□□□ 1.15
PABPC1P2-201ENST00000471997 KIF21AQ7Z4S6 1674 aa22.21■■□□□ 1.15
PABPC1P2-201ENST00000471997 CEP164Q9UPV0 1460 aa22.18■■□□□ 1.14
PABPC1P2-201ENST00000471997 MRC2Q9UBG0 1479 aa22.08■■□□□ 1.12
PABPC1P2-201ENST00000471997 THOC2Q8NI27 1593 aaKnown RBP22.04■■□□□ 1.12
PABPC1P2-201ENST00000471997 TRIM41Q8WV44 630 aa22.01■■□□□ 1.11
PABPC1P2-201ENST00000471997 ABCC8Q09428 1581 aa21.98■■□□□ 1.11
PABPC1P2-201ENST00000471997 WDR62O43379 1518 aa21.97■■□□□ 1.11
PABPC1P2-201ENST00000471997 URB2Q14146 1524 aaKnown RBP21.96■■□□□ 1.11
PABPC1P2-201ENST00000471997 CUX2O14529 1486 aa21.94■■□□□ 1.1
PABPC1P2-201ENST00000471997 DNMBPQ6XZF7 1577 aa21.92■■□□□ 1.1
PABPC1P2-201ENST00000471997 TOPBP1Q92547 1522 aa21.9■■□□□ 1.1
PABPC1P2-201ENST00000471997 WRNQ14191 1432 aaPredicted RBP eCLIP21.85■■□□□ 1.09
PABPC1P2-201ENST00000471997 CUX1P39880 1505 aa21.84■■□□□ 1.09
PABPC1P2-201ENST00000471997 TOP2BQ02880 1626 aa21.76■■□□□ 1.07
PABPC1P2-201ENST00000471997 BIVM-ERCC5R4GMW8 1640 aa21.75■■□□□ 1.07
PABPC1P2-201ENST00000471997 SYNJ1O43426 1573 aa21.74■■□□□ 1.07
PABPC1P2-201ENST00000471997 POLA1P09884 1462 aaPredicted RBP21.73■■□□□ 1.07
PABPC1P2-201ENST00000471997 FGD5Q6ZNL6 1462 aa21.73■■□□□ 1.07
PABPC1P2-201ENST00000471997 IFT140Q96RY7 1462 aa21.71■■□□□ 1.07
PABPC1P2-201ENST00000471997 SOGA1O94964 1423 aa21.68■■□□□ 1.06
PABPC1P2-201ENST00000471997 LOC105371045A0A1W2PR82 267 aa21.66■■□□□ 1.06
PABPC1P2-201ENST00000471997 TARBP1Q13395 1621 aaKnown RBP21.62■■□□□ 1.05
PABPC1P2-201ENST00000471997 RAD54L2Q9Y4B4 1467 aa21.62■■□□□ 1.05
PABPC1P2-201ENST00000471997 FAM9AQ8IZU1 332 aaPredicted RBP21.56■■□□□ 1.04
PABPC1P2-201ENST00000471997 ABCA10Q8WWZ4 1543 aa21.55■■□□□ 1.04
PABPC1P2-201ENST00000471997 EEA1Q15075 1411 aa21.55■■□□□ 1.04
PABPC1P2-201ENST00000471997 WDR97A6NE52 1622 aa21.53■■□□□ 1.04
PABPC1P2-201ENST00000471997 ZNF608Q9ULD9 1512 aaPredicted RBP21.53■■□□□ 1.04
PABPC1P2-201ENST00000471997 TDRD9Q8NDG6 1382 aaKnown RBP21.49■■□□□ 1.03
PABPC1P2-201ENST00000471997 EIF4G3O43432 1585 aaKnown RBP21.47■■□□□ 1.03
PABPC1P2-201ENST00000471997 AQRO60306 1485 aaKnown RBP eCLIP21.47■■□□□ 1.03
PABPC1P2-201ENST00000471997 GAPVD1Q14C86 1478 aa21.43■■□□□ 1.02
PABPC1P2-201ENST00000471997 ABCA5Q8WWZ7 1642 aa21.41■■□□□ 1.02
PABPC1P2-201ENST00000471997 KIF27Q86VH2 1401 aa21.4■■□□□ 1.02
PABPC1P2-201ENST00000471997 GRIN2BQ13224 1484 aa21.39■■□□□ 1.01
PABPC1P2-201ENST00000471997 RUSC2Q8N2Y8 1516 aa21.38■■□□□ 1.01
PABPC1P2-201ENST00000471997 PBRM1Q86U86 1689 aa21.34■■□□□ 1.01
PABPC1P2-201ENST00000471997 CSRNP3Q8WYN3 585 aa21.34■■□□□ 1.01
PABPC1P2-201ENST00000471997 ERICH3Q5RHP9 1530 aa21.31■■□□□ 1
PABPC1P2-201ENST00000471997 MAGI1Q96QZ7 1491 aaPredicted RBP21.3■■□□□ 1
PABPC1P2-201ENST00000471997 SNAPC4Q5SXM2 1469 aa21.28■■□□□ 1
PABPC1P2-201ENST00000471997 KIF21BO75037 1637 aa21.27■■□□□ 1
PABPC1P2-201ENST00000471997 IGF1RP08069 1367 aa21.24■□□□□ 0.99
PABPC1P2-201ENST00000471997 GOLGA3Q08378 1498 aa21.22■□□□□ 0.99
PABPC1P2-201ENST00000471997 CHMP7Q8WUX9 453 aaPredicted RBP21.2■□□□□ 0.98
PABPC1P2-201ENST00000471997 TNIKQ9UKE5 1360 aa21.2■□□□□ 0.98
PABPC1P2-201ENST00000471997 FHAD1B1AJZ9 1412 aa21.2■□□□□ 0.98
PABPC1P2-201ENST00000471997 SYNJ2O15056 1496 aa21.2■□□□□ 0.98
PABPC1P2-201ENST00000471997 FBLN2P98095 1184 aa21.19■□□□□ 0.98
PABPC1P2-201ENST00000471997 EHMT2Q96KQ7 1210 aa21.19■□□□□ 0.98
PABPC1P2-201ENST00000471997 CUL7Q14999 1698 aa21.19■□□□□ 0.98
PABPC1P2-201ENST00000471997 ADAMTS12P58397 1594 aa21.19■□□□□ 0.98
PABPC1P2-201ENST00000471997 CHD1O14646 1710 aa21.15■□□□□ 0.98
PABPC1P2-201ENST00000471997 CARMIL1Q5VZK9 1371 aa21.14■□□□□ 0.98
PABPC1P2-201ENST00000471997 OSCARQ8IYS5 282 aa21.13■□□□□ 0.97
PABPC1P2-201ENST00000471997 GRIN2AQ12879 1464 aa21.09■□□□□ 0.97
PABPC1P2-201ENST00000471997 CEP162Q5TB80 1403 aa21.08■□□□□ 0.96
PABPC1P2-201ENST00000471997 PRXQ9BXM0 1461 aa21.07■□□□□ 0.96
PABPC1P2-201ENST00000471997 RAPGEF2Q9Y4G8 1499 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms