RNA–Protein interactions for RNA: ENST00000373289.3

TTC16-201, Transcript of tetratricopeptide repeat domain 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC16, Length 2,897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16-201ENST00000373289 NISCHQ9Y2I1 1504 aa26.9■■□□□ 1.9
TTC16-201ENST00000373289 SHROOM4Q9ULL8 1493 aa22.99■■□□□ 1.27
TTC16-201ENST00000373289 CCDC180Q9P1Z9 1646 aa22.89■■□□□ 1.26
TTC16-201ENST00000373289 ZCCHC6Q5VYS8 1495 aaKnown RBP22.71■■□□□ 1.23
TTC16-201ENST00000373289 DCAF8L2P0C7V8 631 aa22.53■■□□□ 1.2
TTC16-201ENST00000373289 SUPT5HO00267 1087 aaKnown RBP22.44■■□□□ 1.18
TTC16-201ENST00000373289 DCAF1Q9Y4B6 1507 aa21.98■■□□□ 1.11
TTC16-201ENST00000373289 CHIC1Q5VXU3 224 aa21.66■■□□□ 1.06
TTC16-201ENST00000373289 MYO15BQ96JP2 1530 aa21.59■■□□□ 1.05
TTC16-201ENST00000373289 SCRIBQ14160 1630 aa21.57■■□□□ 1.04
TTC16-201ENST00000373289 ABCC9O60706 1549 aa21.49■■□□□ 1.03
TTC16-201ENST00000373289 RSF1Q96T23 1441 aaPredicted RBP21.25■□□□□ 0.99
TTC16-201ENST00000373289 NACADO15069 1562 aa21.21■□□□□ 0.99
TTC16-201ENST00000373289 LOC105371045A0A1W2PR82 267 aa21.1■□□□□ 0.97
TTC16-201ENST00000373289 CECR2Q9BXF3 1484 aa21.07■□□□□ 0.96
TTC16-201ENST00000373289 RB1CC1Q8TDY2 1594 aa21.06■□□□□ 0.96
TTC16-201ENST00000373289 MROH2BQ7Z745 1585 aa20.96■□□□□ 0.95
TTC16-201ENST00000373289 HRCP23327 699 aa20.95■□□□□ 0.94
TTC16-201ENST00000373289 PCGF6Q9BYE7 350 aa20.91■□□□□ 0.94
TTC16-201ENST00000373289 WIZO95785 1651 aa20.87■□□□□ 0.93
TTC16-201ENST00000373289 TRIM41Q8WV44 630 aa20.85■□□□□ 0.93
TTC16-201ENST00000373289 FAM9AQ8IZU1 332 aaPredicted RBP20.78■□□□□ 0.92
TTC16-201ENST00000373289 UNC13AQ9UPW8 1703 aa20.71■□□□□ 0.91
TTC16-201ENST00000373289 EHMT2Q96KQ7 1210 aa20.69■□□□□ 0.9
TTC16-201ENST00000373289 BAZ1AQ9NRL2 1556 aaPredicted RBP20.66■□□□□ 0.9
TTC16-201ENST00000373289 PPARGC1BQ86YN6 1023 aaKnown RBP20.6■□□□□ 0.89
TTC16-201ENST00000373289 PABPN1Q86U42 306 aaKnown RBP eCLIP20.56■□□□□ 0.88
TTC16-201ENST00000373289 SMARCA4P51532 1647 aa20.54■□□□□ 0.88
TTC16-201ENST00000373289 TOP2AP11388 1531 aaKnown RBP20.45■□□□□ 0.86
TTC16-201ENST00000373289 EIF4G1Q04637 1599 aaKnown RBP20.43■□□□□ 0.86
TTC16-201ENST00000373289 TRIM26Q12899 539 aaPredicted RBP20.43■□□□□ 0.86
TTC16-201ENST00000373289 BICRAQ9NZM4 1560 aa20.41■□□□□ 0.86
TTC16-201ENST00000373289 CCDC88BA6NC98 1476 aa20.4■□□□□ 0.86
TTC16-201ENST00000373289 ABCC8Q09428 1581 aa20.37■□□□□ 0.85
TTC16-201ENST00000373289 SMARCA2P51531 1590 aa20.36■□□□□ 0.85
TTC16-201ENST00000373289 SOGA1O94964 1423 aa20.12■□□□□ 0.81
TTC16-201ENST00000373289 PEG3Q9GZU2 1588 aa20.09■□□□□ 0.81
TTC16-201ENST00000373289 RUSC2Q8N2Y8 1516 aa20.05■□□□□ 0.8
TTC16-201ENST00000373289 ATAD2BQ9ULI0 1458 aa20.05■□□□□ 0.8
TTC16-201ENST00000373289 BAZ1BQ9UIG0 1483 aaKnown RBP20■□□□□ 0.79
TTC16-201ENST00000373289 ZEB1P37275 1124 aaPredicted RBP19.97■□□□□ 0.79
TTC16-201ENST00000373289 WRNQ14191 1432 aaPredicted RBP eCLIP19.97■□□□□ 0.79
TTC16-201ENST00000373289 TTBK1Q5TCY1 1321 aaPredicted RBP19.96■□□□□ 0.79
TTC16-201ENST00000373289 CSRNP3Q8WYN3 585 aa19.94■□□□□ 0.78
TTC16-201ENST00000373289 CEP162Q5TB80 1403 aa19.92■□□□□ 0.78
TTC16-201ENST00000373289 UBTFP17480 764 aaKnown RBP19.91■□□□□ 0.78
TTC16-201ENST00000373289 SYNJ1O43426 1573 aa19.91■□□□□ 0.78
TTC16-201ENST00000373289 EEA1Q15075 1411 aa19.84■□□□□ 0.77
TTC16-201ENST00000373289 TNIKQ9UKE5 1360 aa19.84■□□□□ 0.77
TTC16-201ENST00000373289 GOLGA3Q08378 1498 aa19.77■□□□□ 0.76
TTC16-201ENST00000373289 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.77■□□□□ 0.75
TTC16-201ENST00000373289 RANGAP1P46060 587 aaPredicted RBP19.68■□□□□ 0.74
TTC16-201ENST00000373289 CEP164Q9UPV0 1460 aa19.67■□□□□ 0.74
TTC16-201ENST00000373289 CCER1Q8TC90 406 aaPredicted RBP19.65■□□□□ 0.74
TTC16-201ENST00000373289 NCAPD3P42695 1498 aa19.64■□□□□ 0.73
TTC16-201ENST00000373289 KIF21BO75037 1637 aa19.63■□□□□ 0.73
TTC16-201ENST00000373289 RAPGEF2Q9Y4G8 1499 aa19.63■□□□□ 0.73
TTC16-201ENST00000373289 TOP2BQ02880 1626 aa19.62■□□□□ 0.73
TTC16-201ENST00000373289 HMGXB3Q12766 1538 aa19.62■□□□□ 0.73
TTC16-201ENST00000373289 CLIP1P30622 1438 aa19.57■□□□□ 0.72
TTC16-201ENST00000373289 BIVM-ERCC5R4GMW8 1640 aa19.54■□□□□ 0.72
TTC16-201ENST00000373289 CUX1P39880 1505 aa19.51■□□□□ 0.71
TTC16-201ENST00000373289 SCAF1Q9H7N4 1312 aaKnown RBP19.48■□□□□ 0.71
TTC16-201ENST00000373289 CFTRP13569 1480 aa19.47■□□□□ 0.71
TTC16-201ENST00000373289 VPS8Q8N3P4 1428 aa19.44■□□□□ 0.7
TTC16-201ENST00000373289 HNRNPUL2Q1KMD3 747 aaKnown RBP19.4■□□□□ 0.7
TTC16-201ENST00000373289 PRXQ9BXM0 1461 aa19.38■□□□□ 0.69
TTC16-201ENST00000373289 APLP2Q06481 763 aa19.38■□□□□ 0.69
TTC16-201ENST00000373289 KIF27Q86VH2 1401 aa19.34■□□□□ 0.69
TTC16-201ENST00000373289 ERICH3Q5RHP9 1530 aa19.33■□□□□ 0.69
TTC16-201ENST00000373289 CC2D2AQ9P2K1 1620 aa19.32■□□□□ 0.68
TTC16-201ENST00000373289 CADPSQ9ULU8 1353 aa19.29■□□□□ 0.68
TTC16-201ENST00000373289 PRDM2Q13029 1718 aa19.29■□□□□ 0.68
TTC16-201ENST00000373289 ARAP1Q96P48 1450 aa19.27■□□□□ 0.68
TTC16-201ENST00000373289 DIEXFQ68CQ4 756 aaKnown RBP19.25■□□□□ 0.67
TTC16-201ENST00000373289 CUX2O14529 1486 aa19.24■□□□□ 0.67
TTC16-201ENST00000373289 KANK4Q5T7N3 995 aaPredicted RBP19.22■□□□□ 0.67
TTC16-201ENST00000373289 PELP1Q8IZL8 1130 aaKnown RBP19.22■□□□□ 0.67
TTC16-201ENST00000373289 ACIN1Q9UKV3 1341 aaKnown RBP19.2■□□□□ 0.66
TTC16-201ENST00000373289 FGD5Q6ZNL6 1462 aa19.19■□□□□ 0.66
TTC16-201ENST00000373289 NEUROD1Q13562 356 aa19.19■□□□□ 0.66
TTC16-201ENST00000373289 IGF1RP08069 1367 aa19.17■□□□□ 0.66
TTC16-201ENST00000373289 ARHGAP35Q9NRY4 1499 aa19.14■□□□□ 0.66
TTC16-201ENST00000373289 FANCD2Q9BXW9 1451 aa19.13■□□□□ 0.65
TTC16-201ENST00000373289 NESP48681 1621 aa19.12■□□□□ 0.65
TTC16-201ENST00000373289 CARMIL1Q5VZK9 1371 aa19.09■□□□□ 0.65
TTC16-201ENST00000373289 CENPBP07199 599 aaPredicted RBP19.07■□□□□ 0.64
TTC16-201ENST00000373289 RAD54L2Q9Y4B4 1467 aa19.06■□□□□ 0.64
TTC16-201ENST00000373289 GTF3C3Q9Y5Q9 886 aa19.04■□□□□ 0.64
TTC16-201ENST00000373289 ZNF316A6NFI3 1004 aaPredicted RBP19.03■□□□□ 0.64
TTC16-201ENST00000373289 P3H3Q8IVL6 736 aa19.01■□□□□ 0.63
TTC16-201ENST00000373289 DNAJC5BQ9UF47 199 aa19■□□□□ 0.63
TTC16-201ENST00000373289 ITGAEP38570 1179 aa18.99■□□□□ 0.63
TTC16-201ENST00000373289 TOPBP1Q92547 1522 aa18.98■□□□□ 0.63
TTC16-201ENST00000373289 POLA1P09884 1462 aaPredicted RBP18.98■□□□□ 0.63
TTC16-201ENST00000373289 DNMBPQ6XZF7 1577 aa18.98■□□□□ 0.63
TTC16-201ENST00000373289 RRBP1Q9P2E9 1410 aaKnown RBP18.94■□□□□ 0.62
TTC16-201ENST00000373289 ATP1B4Q9UN42 357 aaPredicted RBP18.92■□□□□ 0.62
TTC16-201ENST00000373289 DHX57Q6P158 1386 aaKnown RBP18.92■□□□□ 0.62
TTC16-201ENST00000373289 YTHDC1Q96MU7 727 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms