RNA–Protein interactions for RNA: ENST00000397012.6

PPARG-206, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPARG, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-206ENST00000397012 NISCHQ9Y2I1 1504 aa30.41■■■□□ 2.46
PPARG-206ENST00000397012 CCDC180Q9P1Z9 1646 aa26.55■■□□□ 1.84
PPARG-206ENST00000397012 ZCCHC6Q5VYS8 1495 aaKnown RBP25.55■■□□□ 1.68
PPARG-206ENST00000397012 DCAF1Q9Y4B6 1507 aa25.19■■□□□ 1.62
PPARG-206ENST00000397012 ABCC9O60706 1549 aa24.99■■□□□ 1.59
PPARG-206ENST00000397012 DCAF8L2P0C7V8 631 aa24.96■■□□□ 1.59
PPARG-206ENST00000397012 MYO15BQ96JP2 1530 aa24.9■■□□□ 1.58
PPARG-206ENST00000397012 NACADO15069 1562 aa24.7■■□□□ 1.54
PPARG-206ENST00000397012 SHROOM4Q9ULL8 1493 aa24.68■■□□□ 1.54
PPARG-206ENST00000397012 RB1CC1Q8TDY2 1594 aa24.47■■□□□ 1.51
PPARG-206ENST00000397012 SCRIBQ14160 1630 aa24.33■■□□□ 1.48
PPARG-206ENST00000397012 UNC13AQ9UPW8 1703 aa24.02■■□□□ 1.44
PPARG-206ENST00000397012 BICRAQ9NZM4 1560 aa23.76■■□□□ 1.39
PPARG-206ENST00000397012 SUPT5HO00267 1087 aaKnown RBP23.76■■□□□ 1.39
PPARG-206ENST00000397012 CECR2Q9BXF3 1484 aa23.6■■□□□ 1.37
PPARG-206ENST00000397012 RSF1Q96T23 1441 aaPredicted RBP23.58■■□□□ 1.36
PPARG-206ENST00000397012 PABPN1Q86U42 306 aaKnown RBP eCLIP23.54■■□□□ 1.36
PPARG-206ENST00000397012 MROH2BQ7Z745 1585 aa23.48■■□□□ 1.35
PPARG-206ENST00000397012 BAZ1AQ9NRL2 1556 aaPredicted RBP23.48■■□□□ 1.35
PPARG-206ENST00000397012 SMARCA4P51532 1647 aa23.37■■□□□ 1.33
PPARG-206ENST00000397012 WIZO95785 1651 aa23.28■■□□□ 1.32
PPARG-206ENST00000397012 PEG3Q9GZU2 1588 aa23.14■■□□□ 1.29
PPARG-206ENST00000397012 TOP2AP11388 1531 aaKnown RBP23.05■■□□□ 1.28
PPARG-206ENST00000397012 EIF4G1Q04637 1599 aaKnown RBP23.01■■□□□ 1.27
PPARG-206ENST00000397012 ATAD2BQ9ULI0 1458 aa22.97■■□□□ 1.27
PPARG-206ENST00000397012 SMARCA2P51531 1590 aa22.97■■□□□ 1.27
PPARG-206ENST00000397012 CHIC1Q5VXU3 224 aa22.82■■□□□ 1.24
PPARG-206ENST00000397012 BAZ1BQ9UIG0 1483 aaKnown RBP22.82■■□□□ 1.24
PPARG-206ENST00000397012 CCDC88BA6NC98 1476 aa22.8■■□□□ 1.24
PPARG-206ENST00000397012 NCAPD3P42695 1498 aa22.8■■□□□ 1.24
PPARG-206ENST00000397012 HMGXB3Q12766 1538 aa22.77■■□□□ 1.24
PPARG-206ENST00000397012 CC2D2AQ9P2K1 1620 aa22.67■■□□□ 1.22
PPARG-206ENST00000397012 TRIM41Q8WV44 630 aa22.37■■□□□ 1.17
PPARG-206ENST00000397012 ABCC8Q09428 1581 aa22.3■■□□□ 1.16
PPARG-206ENST00000397012 CFTRP13569 1480 aa22.29■■□□□ 1.16
PPARG-206ENST00000397012 PRDM2Q13029 1718 aa22.22■■□□□ 1.15
PPARG-206ENST00000397012 CADPSQ9ULU8 1353 aa22.19■■□□□ 1.14
PPARG-206ENST00000397012 WRNQ14191 1432 aaPredicted RBP eCLIP22.17■■□□□ 1.14
PPARG-206ENST00000397012 SYNJ1O43426 1573 aa22.1■■□□□ 1.13
PPARG-206ENST00000397012 DNAJC5BQ9UF47 199 aa22.05■■□□□ 1.12
PPARG-206ENST00000397012 TOP2BQ02880 1626 aa22.03■■□□□ 1.12
PPARG-206ENST00000397012 BIVM-ERCC5R4GMW8 1640 aa22.02■■□□□ 1.12
PPARG-206ENST00000397012 LAMC3Q9Y6N6 1575 aa22.02■■□□□ 1.12
PPARG-206ENST00000397012 NESP48681 1621 aa21.96■■□□□ 1.11
PPARG-206ENST00000397012 CUX1P39880 1505 aa21.95■■□□□ 1.1
PPARG-206ENST00000397012 FANCD2Q9BXW9 1451 aa21.93■■□□□ 1.1
PPARG-206ENST00000397012 FAM9AQ8IZU1 332 aaPredicted RBP21.9■■□□□ 1.1
PPARG-206ENST00000397012 LOC105371045A0A1W2PR82 267 aa21.9■■□□□ 1.1
PPARG-206ENST00000397012 SOGA1O94964 1423 aa21.89■■□□□ 1.09
PPARG-206ENST00000397012 EEA1Q15075 1411 aa21.89■■□□□ 1.09
PPARG-206ENST00000397012 RUSC2Q8N2Y8 1516 aa21.81■■□□□ 1.08
PPARG-206ENST00000397012 PDS5BQ9NTI5 1447 aa21.81■■□□□ 1.08
PPARG-206ENST00000397012 CEP164Q9UPV0 1460 aa21.79■■□□□ 1.08
PPARG-206ENST00000397012 DNMBPQ6XZF7 1577 aa21.76■■□□□ 1.07
PPARG-206ENST00000397012 KIF21AQ7Z4S6 1674 aa21.73■■□□□ 1.07
PPARG-206ENST00000397012 CSRNP3Q8WYN3 585 aa21.73■■□□□ 1.07
PPARG-206ENST00000397012 TOPBP1Q92547 1522 aa21.7■■□□□ 1.07
PPARG-206ENST00000397012 FGD5Q6ZNL6 1462 aa21.69■■□□□ 1.06
PPARG-206ENST00000397012 URB2Q14146 1524 aaKnown RBP21.67■■□□□ 1.06
PPARG-206ENST00000397012 KIF21BO75037 1637 aa21.61■■□□□ 1.05
PPARG-206ENST00000397012 KIF27Q86VH2 1401 aa21.61■■□□□ 1.05
PPARG-206ENST00000397012 POLA1P09884 1462 aaPredicted RBP21.6■■□□□ 1.05
PPARG-206ENST00000397012 GOLGA3Q08378 1498 aa21.55■■□□□ 1.04
PPARG-206ENST00000397012 EHMT2Q96KQ7 1210 aa21.54■■□□□ 1.04
PPARG-206ENST00000397012 MRC2Q9UBG0 1479 aa21.54■■□□□ 1.04
PPARG-206ENST00000397012 CUX2O14529 1486 aa21.53■■□□□ 1.04
PPARG-206ENST00000397012 ABCA10Q8WWZ4 1543 aa21.53■■□□□ 1.04
PPARG-206ENST00000397012 TNIKQ9UKE5 1360 aa21.51■■□□□ 1.03
PPARG-206ENST00000397012 PRXQ9BXM0 1461 aa21.5■■□□□ 1.03
PPARG-206ENST00000397012 RAD54L2Q9Y4B4 1467 aa21.5■■□□□ 1.03
PPARG-206ENST00000397012 WDR97A6NE52 1622 aa21.48■■□□□ 1.03
PPARG-206ENST00000397012 ERICH3Q5RHP9 1530 aa21.47■■□□□ 1.03
PPARG-206ENST00000397012 RAPGEF2Q9Y4G8 1499 aa21.45■■□□□ 1.02
PPARG-206ENST00000397012 WDR62O43379 1518 aa21.45■■□□□ 1.02
PPARG-206ENST00000397012 IGF1RP08069 1367 aa21.43■■□□□ 1.02
PPARG-206ENST00000397012 TARBP1Q13395 1621 aaKnown RBP21.42■■□□□ 1.02
PPARG-206ENST00000397012 ERCC6Q03468 1493 aa21.41■■□□□ 1.02
PPARG-206ENST00000397012 UBTFP17480 764 aaKnown RBP21.4■■□□□ 1.02
PPARG-206ENST00000397012 THOC2Q8NI27 1593 aaKnown RBP21.38■■□□□ 1.01
PPARG-206ENST00000397012 CEP162Q5TB80 1403 aa21.36■■□□□ 1.01
PPARG-206ENST00000397012 ABCA5Q8WWZ7 1642 aa21.36■■□□□ 1.01
PPARG-206ENST00000397012 CARMIL1Q5VZK9 1371 aa21.3■■□□□ 1
PPARG-206ENST00000397012 CUL7Q14999 1698 aa21.29■■□□□ 1
PPARG-206ENST00000397012 TDRD9Q8NDG6 1382 aaKnown RBP21.28■■□□□ 1
PPARG-206ENST00000397012 GAPVD1Q14C86 1478 aa21.28■■□□□ 1
PPARG-206ENST00000397012 IFT140Q96RY7 1462 aa21.28■■□□□ 1
PPARG-206ENST00000397012 CLIP1P30622 1438 aa21.19■□□□□ 0.98
PPARG-206ENST00000397012 PBRM1Q86U86 1689 aa21.19■□□□□ 0.98
PPARG-206ENST00000397012 AQRO60306 1485 aaKnown RBP eCLIP21.16■□□□□ 0.983e-6■■□□□ 13.8
PPARG-206ENST00000397012 ZNF608Q9ULD9 1512 aaPredicted RBP21.14■□□□□ 0.97
PPARG-206ENST00000397012 GRIN2BQ13224 1484 aa21.12■□□□□ 0.97
PPARG-206ENST00000397012 EIF4G3O43432 1585 aaKnown RBP21.09■□□□□ 0.97
PPARG-206ENST00000397012 ADAMTS12P58397 1594 aa21.07■□□□□ 0.96
PPARG-206ENST00000397012 FHAD1B1AJZ9 1412 aa21.06■□□□□ 0.96
PPARG-206ENST00000397012 CTTNBP2Q8WZ74 1663 aa21.06■□□□□ 0.96
PPARG-206ENST00000397012 VPS8Q8N3P4 1428 aa21.03■□□□□ 0.96
PPARG-206ENST00000397012 ARHGAP35Q9NRY4 1499 aa21.01■□□□□ 0.95
PPARG-206ENST00000397012 ARAP1Q96P48 1450 aa21.01■□□□□ 0.95
PPARG-206ENST00000397012 RANGAP1P46060 587 aaPredicted RBP20.98■□□□□ 0.95
PPARG-206ENST00000397012 SNAPC4Q5SXM2 1469 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms