RNA–Protein interactions for RNA: ENST00000374617.8

WDR46-231, Transcript of WD repeat domain 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene WDR46, Length 2,358 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR46-231ENST00000374617 NISCHQ9Y2I1 1504 aa33.03■■■□□ 2.88
WDR46-231ENST00000374617 CCDC180Q9P1Z9 1646 aa29.29■■■□□ 2.28
WDR46-231ENST00000374617 ABCC9O60706 1549 aa28.4■■■□□ 2.14
WDR46-231ENST00000374617 ZCCHC6Q5VYS8 1495 aaKnown RBP27.55■■■□□ 2
WDR46-231ENST00000374617 NACADO15069 1562 aa27.51■■■□□ 2
WDR46-231ENST00000374617 DCAF8L2P0C7V8 631 aa27.49■■□□□ 1.99
WDR46-231ENST00000374617 RB1CC1Q8TDY2 1594 aa27.47■■□□□ 1.99
WDR46-231ENST00000374617 MYO15BQ96JP2 1530 aa27.46■■□□□ 1.99
WDR46-231ENST00000374617 DCAF1Q9Y4B6 1507 aa27.39■■□□□ 1.98
WDR46-231ENST00000374617 UNC13AQ9UPW8 1703 aa26.78■■□□□ 1.88
WDR46-231ENST00000374617 SCRIBQ14160 1630 aa26.66■■□□□ 1.86
WDR46-231ENST00000374617 BICRAQ9NZM4 1560 aa26.6■■□□□ 1.85
WDR46-231ENST00000374617 PABPN1Q86U42 306 aaKnown RBP eCLIP26.58■■□□□ 1.857e-7■■■■■ 27.2
WDR46-231ENST00000374617 SHROOM4Q9ULL8 1493 aa26.43■■□□□ 1.82
WDR46-231ENST00000374617 DNAJC5BQ9UF47 199 aa25.91■■□□□ 1.74
WDR46-231ENST00000374617 EIF4G1Q04637 1599 aaKnown RBP25.89■■□□□ 1.73
WDR46-231ENST00000374617 CC2D2AQ9P2K1 1620 aa25.72■■□□□ 1.71
WDR46-231ENST00000374617 CECR2Q9BXF3 1484 aa25.67■■□□□ 1.7
WDR46-231ENST00000374617 BAZ1AQ9NRL2 1556 aaPredicted RBP25.6■■□□□ 1.69
WDR46-231ENST00000374617 SMARCA4P51532 1647 aa25.57■■□□□ 1.68
WDR46-231ENST00000374617 MROH2BQ7Z745 1585 aa25.42■■□□□ 1.66
WDR46-231ENST00000374617 ATAD2BQ9ULI0 1458 aa25.4■■□□□ 1.66
WDR46-231ENST00000374617 SMARCA2P51531 1590 aa25.4■■□□□ 1.66
WDR46-231ENST00000374617 NCAPD3P42695 1498 aa25.39■■□□□ 1.66
WDR46-231ENST00000374617 PEG3Q9GZU2 1588 aa25.36■■□□□ 1.65
WDR46-231ENST00000374617 HMGXB3Q12766 1538 aa25.26■■□□□ 1.63
WDR46-231ENST00000374617 RSF1Q96T23 1441 aaPredicted RBP25.24■■□□□ 1.63
WDR46-231ENST00000374617 BAZ1BQ9UIG0 1483 aaKnown RBP25.19■■□□□ 1.62
WDR46-231ENST00000374617 WIZO95785 1651 aa25.15■■□□□ 1.62
WDR46-231ENST00000374617 TOP2AP11388 1531 aaKnown RBP24.93■■□□□ 1.58
WDR46-231ENST00000374617 SUPT5HO00267 1087 aaKnown RBP24.71■■□□□ 1.55
WDR46-231ENST00000374617 LAMC3Q9Y6N6 1575 aa24.67■■□□□ 1.54
WDR46-231ENST00000374617 CADPSQ9ULU8 1353 aa24.66■■□□□ 1.54
WDR46-231ENST00000374617 CCDC88BA6NC98 1476 aa24.64■■□□□ 1.54
WDR46-231ENST00000374617 NESP48681 1621 aa24.63■■□□□ 1.53
WDR46-231ENST00000374617 CFTRP13569 1480 aa24.54■■□□□ 1.52
WDR46-231ENST00000374617 PDS5BQ9NTI5 1447 aa24.53■■□□□ 1.52
WDR46-231ENST00000374617 ERCC6Q03468 1493 aa24.5■■□□□ 1.51
WDR46-231ENST00000374617 KIF21AQ7Z4S6 1674 aa24.34■■□□□ 1.49
WDR46-231ENST00000374617 FANCD2Q9BXW9 1451 aa24.33■■□□□ 1.49
WDR46-231ENST00000374617 PRDM2Q13029 1718 aa24.33■■□□□ 1.49
WDR46-231ENST00000374617 CEP164Q9UPV0 1460 aa24.29■■□□□ 1.48
WDR46-231ENST00000374617 THOC2Q8NI27 1593 aaKnown RBP24.23■■□□□ 1.47
WDR46-231ENST00000374617 MRC2Q9UBG0 1479 aa24.22■■□□□ 1.47
WDR46-231ENST00000374617 CUX2O14529 1486 aa24.21■■□□□ 1.47
WDR46-231ENST00000374617 WDR62O43379 1518 aa24.13■■□□□ 1.45
WDR46-231ENST00000374617 URB2Q14146 1524 aaKnown RBP24.06■■□□□ 1.44
WDR46-231ENST00000374617 ABCC8Q09428 1581 aa24.05■■□□□ 1.44
WDR46-231ENST00000374617 TOPBP1Q92547 1522 aa23.96■■□□□ 1.43
WDR46-231ENST00000374617 DNMBPQ6XZF7 1577 aa23.96■■□□□ 1.43
WDR46-231ENST00000374617 CUX1P39880 1505 aa23.84■■□□□ 1.41
WDR46-231ENST00000374617 IFT140Q96RY7 1462 aa23.8■■□□□ 1.4
WDR46-231ENST00000374617 WRNQ14191 1432 aaPredicted RBP eCLIP23.79■■□□□ 1.4
WDR46-231ENST00000374617 POLA1P09884 1462 aaPredicted RBP23.77■■□□□ 1.4
WDR46-231ENST00000374617 FGD5Q6ZNL6 1462 aa23.73■■□□□ 1.39
WDR46-231ENST00000374617 TOP2BQ02880 1626 aa23.71■■□□□ 1.39
WDR46-231ENST00000374617 SOGA1O94964 1423 aa23.71■■□□□ 1.39
WDR46-231ENST00000374617 BIVM-ERCC5R4GMW8 1640 aa23.7■■□□□ 1.38
WDR46-231ENST00000374617 TARBP1Q13395 1621 aaKnown RBP23.68■■□□□ 1.38
WDR46-231ENST00000374617 SYNJ1O43426 1573 aa23.67■■□□□ 1.38
WDR46-231ENST00000374617 RAD54L2Q9Y4B4 1467 aa23.64■■□□□ 1.38
WDR46-231ENST00000374617 ZNF608Q9ULD9 1512 aaPredicted RBP23.61■■□□□ 1.37
WDR46-231ENST00000374617 WDR97A6NE52 1622 aa23.58■■□□□ 1.36
WDR46-231ENST00000374617 ABCA10Q8WWZ4 1543 aa23.55■■□□□ 1.36
WDR46-231ENST00000374617 EIF4G3O43432 1585 aaKnown RBP23.52■■□□□ 1.36
WDR46-231ENST00000374617 AQRO60306 1485 aaKnown RBP eCLIP23.52■■□□□ 1.363e-7■■■■□ 26
WDR46-231ENST00000374617 TDRD9Q8NDG6 1382 aaKnown RBP23.52■■□□□ 1.36
WDR46-231ENST00000374617 GAPVD1Q14C86 1478 aa23.43■■□□□ 1.34
WDR46-231ENST00000374617 GRIN2BQ13224 1484 aa23.41■■□□□ 1.34
WDR46-231ENST00000374617 ABCA5Q8WWZ7 1642 aa23.41■■□□□ 1.34
WDR46-231ENST00000374617 TRIM41Q8WV44 630 aa23.39■■□□□ 1.33
WDR46-231ENST00000374617 MAGI1Q96QZ7 1491 aaPredicted RBP23.33■■□□□ 1.33
WDR46-231ENST00000374617 PBRM1Q86U86 1689 aa23.32■■□□□ 1.32
WDR46-231ENST00000374617 KIF27Q86VH2 1401 aa23.31■■□□□ 1.32
WDR46-231ENST00000374617 SNAPC4Q5SXM2 1469 aa23.3■■□□□ 1.32
WDR46-231ENST00000374617 ERICH3Q5RHP9 1530 aa23.29■■□□□ 1.32
WDR46-231ENST00000374617 OSCARQ8IYS5 282 aa23.27■■□□□ 1.32
WDR46-231ENST00000374617 DNAJC5Q9H3Z4 198 aa23.25■■□□□ 1.31
WDR46-231ENST00000374617 CHIC1Q5VXU3 224 aa23.24■■□□□ 1.31
WDR46-231ENST00000374617 SYNJ2O15056 1496 aa23.23■■□□□ 1.31
WDR46-231ENST00000374617 CHMP7Q8WUX9 453 aaPredicted RBP23.22■■□□□ 1.31
WDR46-231ENST00000374617 FBLN2P98095 1184 aa23.21■■□□□ 1.31
WDR46-231ENST00000374617 IGF1RP08069 1367 aa23.19■■□□□ 1.3
WDR46-231ENST00000374617 FHAD1B1AJZ9 1412 aa23.18■■□□□ 1.3
WDR46-231ENST00000374617 CHD1O14646 1710 aa23.18■■□□□ 1.3
WDR46-231ENST00000374617 ADAMTS12P58397 1594 aa23.16■■□□□ 1.3
WDR46-231ENST00000374617 CUL7Q14999 1698 aa23.09■■□□□ 1.29
WDR46-231ENST00000374617 GRIN2AQ12879 1464 aa23.09■■□□□ 1.29
WDR46-231ENST00000374617 RUSC2Q8N2Y8 1516 aa23.07■■□□□ 1.28
WDR46-231ENST00000374617 CARMIL1Q5VZK9 1371 aa23.05■■□□□ 1.28
WDR46-231ENST00000374617 EEA1Q15075 1411 aa23.02■■□□□ 1.28
WDR46-231ENST00000374617 NUP160Q12769 1436 aa22.99■■□□□ 1.27
WDR46-231ENST00000374617 CLASP1Q7Z460 1538 aa22.97■■□□□ 1.27
WDR46-231ENST00000374617 CSRNP3Q8WYN3 585 aa22.94■■□□□ 1.26
WDR46-231ENST00000374617 CEP170Q5SW79 1584 aa22.93■■□□□ 1.26
WDR46-231ENST00000374617 RAPGEF2Q9Y4G8 1499 aa22.93■■□□□ 1.26
WDR46-231ENST00000374617 PRXQ9BXM0 1461 aa22.89■■□□□ 1.26
WDR46-231ENST00000374617 KIAA0586Q9BVV6 1533 aa22.84■■□□□ 1.25
WDR46-231ENST00000374617 ARHGEF11O15085 1522 aa22.82■■□□□ 1.24
WDR46-231ENST00000374617 FAM9AQ8IZU1 332 aaPredicted RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms