RNA–Protein interactions for RNA: ENST00000456737.1

LINC00442-202, long intergenic non-protein coding RNA 442, humanhuman

TSL 1 (best) BASIC

Gene LINC00442, Length 2,063 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00442-202ENST00000456737 NISCHQ9Y2I1 1504 aa27.77■■■□□ 2.04
LINC00442-202ENST00000456737 CCDC180Q9P1Z9 1646 aa24.23■■□□□ 1.47
LINC00442-202ENST00000456737 ZCCHC6Q5VYS8 1495 aaKnown RBP23.33■■□□□ 1.33
LINC00442-202ENST00000456737 DCAF8L2P0C7V8 631 aa22.97■■□□□ 1.27
LINC00442-202ENST00000456737 DCAF1Q9Y4B6 1507 aa22.95■■□□□ 1.26
LINC00442-202ENST00000456737 ABCC9O60706 1549 aa22.86■■□□□ 1.25
LINC00442-202ENST00000456737 SHROOM4Q9ULL8 1493 aa22.71■■□□□ 1.23
LINC00442-202ENST00000456737 MYO15BQ96JP2 1530 aa22.66■■□□□ 1.22
LINC00442-202ENST00000456737 NACADO15069 1562 aa22.53■■□□□ 1.2
LINC00442-202ENST00000456737 RB1CC1Q8TDY2 1594 aa22.34■■□□□ 1.17
LINC00442-202ENST00000456737 SCRIBQ14160 1630 aa22.29■■□□□ 1.16
LINC00442-202ENST00000456737 UNC13AQ9UPW8 1703 aa21.98■■□□□ 1.11
LINC00442-202ENST00000456737 SUPT5HO00267 1087 aaKnown RBP21.89■■□□□ 1.09
LINC00442-202ENST00000456737 BICRAQ9NZM4 1560 aa21.66■■□□□ 1.06
LINC00442-202ENST00000456737 CECR2Q9BXF3 1484 aa21.59■■□□□ 1.05
LINC00442-202ENST00000456737 PABPN1Q86U42 306 aaKnown RBP eCLIP21.56■■□□□ 1.04
LINC00442-202ENST00000456737 RSF1Q96T23 1441 aaPredicted RBP21.56■■□□□ 1.04
LINC00442-202ENST00000456737 MROH2BQ7Z745 1585 aa21.47■■□□□ 1.03
LINC00442-202ENST00000456737 BAZ1AQ9NRL2 1556 aaPredicted RBP21.46■■□□□ 1.03
LINC00442-202ENST00000456737 SMARCA4P51532 1647 aa21.36■■□□□ 1.01
LINC00442-202ENST00000456737 WIZO95785 1651 aa21.33■■□□□ 1
LINC00442-202ENST00000456737 HRCP23327 699 aa21.24■□□□□ 0.99
LINC00442-202ENST00000456737 PELP1Q8IZL8 1130 aaKnown RBP21.1■□□□□ 0.97
LINC00442-202ENST00000456737 PEG3Q9GZU2 1588 aa21.08■□□□□ 0.97
LINC00442-202ENST00000456737 TOP2AP11388 1531 aaKnown RBP21.07■□□□□ 0.96
LINC00442-202ENST00000456737 EIF4G1Q04637 1599 aaKnown RBP21.01■□□□□ 0.95
LINC00442-202ENST00000456737 SMARCA2P51531 1590 aa20.98■□□□□ 0.95
LINC00442-202ENST00000456737 ATAD2BQ9ULI0 1458 aa20.97■□□□□ 0.95
LINC00442-202ENST00000456737 CHIC1Q5VXU3 224 aa20.95■□□□□ 0.94
LINC00442-202ENST00000456737 BAZ1BQ9UIG0 1483 aaKnown RBP20.87■□□□□ 0.93
LINC00442-202ENST00000456737 CCDC88BA6NC98 1476 aa20.86■□□□□ 0.93
LINC00442-202ENST00000456737 NCAPD3P42695 1498 aa20.78■□□□□ 0.92
LINC00442-202ENST00000456737 HMGXB3Q12766 1538 aa20.76■□□□□ 0.91
LINC00442-202ENST00000456737 CC2D2AQ9P2K1 1620 aa20.7■□□□□ 0.9
LINC00442-202ENST00000456737 TRIM41Q8WV44 630 aa20.57■□□□□ 0.88
LINC00442-202ENST00000456737 PCGF6Q9BYE7 350 aa20.5■□□□□ 0.87
LINC00442-202ENST00000456737 MYT1Q01538 1121 aa20.49■□□□□ 0.87
LINC00442-202ENST00000456737 ABCC8Q09428 1581 aa20.46■□□□□ 0.87
LINC00442-202ENST00000456737 PPARGC1BQ86YN6 1023 aaKnown RBP20.39■□□□□ 0.86
LINC00442-202ENST00000456737 CFTRP13569 1480 aa20.34■□□□□ 0.85
LINC00442-202ENST00000456737 PRDM2Q13029 1718 aa20.32■□□□□ 0.84
LINC00442-202ENST00000456737 WRNQ14191 1432 aaPredicted RBP eCLIP20.3■□□□□ 0.84
LINC00442-202ENST00000456737 CADPSQ9ULU8 1353 aa20.26■□□□□ 0.83
LINC00442-202ENST00000456737 SYNJ1O43426 1573 aa20.23■□□□□ 0.83
LINC00442-202ENST00000456737 ZEB1P37275 1124 aaPredicted RBP20.2■□□□□ 0.82
LINC00442-202ENST00000456737 FAM9AQ8IZU1 332 aaPredicted RBP20.2■□□□□ 0.82
LINC00442-202ENST00000456737 LOC105371045A0A1W2PR82 267 aa20.17■□□□□ 0.82
LINC00442-202ENST00000456737 TOP2BQ02880 1626 aa20.15■□□□□ 0.82
LINC00442-202ENST00000456737 DNAJC5BQ9UF47 199 aa20.14■□□□□ 0.81
LINC00442-202ENST00000456737 BIVM-ERCC5R4GMW8 1640 aa20.13■□□□□ 0.81
LINC00442-202ENST00000456737 LAMC3Q9Y6N6 1575 aa20.1■□□□□ 0.81
LINC00442-202ENST00000456737 NESP48681 1621 aa20.09■□□□□ 0.81
LINC00442-202ENST00000456737 TRIM26Q12899 539 aaPredicted RBP20.09■□□□□ 0.81
LINC00442-202ENST00000456737 CUX1P39880 1505 aa20.07■□□□□ 0.8
LINC00442-202ENST00000456737 SOGA1O94964 1423 aa20.06■□□□□ 0.8
LINC00442-202ENST00000456737 FANCD2Q9BXW9 1451 aa20.05■□□□□ 0.8
LINC00442-202ENST00000456737 EEA1Q15075 1411 aa20.02■□□□□ 0.8
LINC00442-202ENST00000456737 SCAF1Q9H7N4 1312 aaKnown RBP20.01■□□□□ 0.79
LINC00442-202ENST00000456737 RUSC2Q8N2Y8 1516 aa19.99■□□□□ 0.79
LINC00442-202ENST00000456737 EHMT2Q96KQ7 1210 aa19.93■□□□□ 0.78
LINC00442-202ENST00000456737 PDS5BQ9NTI5 1447 aa19.92■□□□□ 0.78
LINC00442-202ENST00000456737 CSRNP3Q8WYN3 585 aa19.92■□□□□ 0.78
LINC00442-202ENST00000456737 CEP164Q9UPV0 1460 aa19.92■□□□□ 0.78
LINC00442-202ENST00000456737 KIF21AQ7Z4S6 1674 aa19.89■□□□□ 0.77
LINC00442-202ENST00000456737 DNMBPQ6XZF7 1577 aa19.88■□□□□ 0.77
LINC00442-202ENST00000456737 FGD5Q6ZNL6 1462 aa19.84■□□□□ 0.77
LINC00442-202ENST00000456737 TOPBP1Q92547 1522 aa19.84■□□□□ 0.77
LINC00442-202ENST00000456737 URB2Q14146 1524 aaKnown RBP19.79■□□□□ 0.76
LINC00442-202ENST00000456737 KIF27Q86VH2 1401 aa19.79■□□□□ 0.76
LINC00442-202ENST00000456737 KIF21BO75037 1637 aa19.78■□□□□ 0.76
LINC00442-202ENST00000456737 GOLGA3Q08378 1498 aa19.76■□□□□ 0.75
LINC00442-202ENST00000456737 POLA1P09884 1462 aaPredicted RBP19.75■□□□□ 0.75
LINC00442-202ENST00000456737 CUX2O14529 1486 aa19.73■□□□□ 0.75
LINC00442-202ENST00000456737 TNIKQ9UKE5 1360 aa19.7■□□□□ 0.74
LINC00442-202ENST00000456737 UBTFP17480 764 aaKnown RBP19.69■□□□□ 0.74
LINC00442-202ENST00000456737 RAD54L2Q9Y4B4 1467 aa19.68■□□□□ 0.74
LINC00442-202ENST00000456737 ABCA10Q8WWZ4 1543 aa19.67■□□□□ 0.74
LINC00442-202ENST00000456737 RAPGEF2Q9Y4G8 1499 aa19.66■□□□□ 0.74
LINC00442-202ENST00000456737 MRC2Q9UBG0 1479 aa19.66■□□□□ 0.74
LINC00442-202ENST00000456737 PRXQ9BXM0 1461 aa19.65■□□□□ 0.74
LINC00442-202ENST00000456737 ACIN1Q9UKV3 1341 aaKnown RBP19.64■□□□□ 0.73
LINC00442-202ENST00000456737 ERICH3Q5RHP9 1530 aa19.63■□□□□ 0.73
LINC00442-202ENST00000456737 WDR97A6NE52 1622 aa19.62■□□□□ 0.73
LINC00442-202ENST00000456737 CEP162Q5TB80 1403 aa19.61■□□□□ 0.73
LINC00442-202ENST00000456737 ERCC6Q03468 1493 aa19.6■□□□□ 0.73
LINC00442-202ENST00000456737 IGF1RP08069 1367 aa19.59■□□□□ 0.73
LINC00442-202ENST00000456737 WDR62O43379 1518 aa19.56■□□□□ 0.72
LINC00442-202ENST00000456737 TARBP1Q13395 1621 aaKnown RBP19.55■□□□□ 0.72
LINC00442-202ENST00000456737 CENPBP07199 599 aaPredicted RBP19.53■□□□□ 0.72
LINC00442-202ENST00000456737 ABCA5Q8WWZ7 1642 aa19.52■□□□□ 0.72
LINC00442-202ENST00000456737 THOC2Q8NI27 1593 aaKnown RBP19.5■□□□□ 0.71
LINC00442-202ENST00000456737 CARMIL1Q5VZK9 1371 aa19.5■□□□□ 0.71
LINC00442-202ENST00000456737 TDRD9Q8NDG6 1382 aaKnown RBP19.49■□□□□ 0.71
LINC00442-202ENST00000456737 CUL7Q14999 1698 aa19.48■□□□□ 0.71
LINC00442-202ENST00000456737 GAPVD1Q14C86 1478 aa19.47■□□□□ 0.71
LINC00442-202ENST00000456737 CLIP1P30622 1438 aa19.45■□□□□ 0.7
LINC00442-202ENST00000456737 IFT140Q96RY7 1462 aa19.43■□□□□ 0.7
LINC00442-202ENST00000456737 NEUROD1Q13562 356 aa19.41■□□□□ 0.7
LINC00442-202ENST00000456737 PBRM1Q86U86 1689 aa19.4■□□□□ 0.7
LINC00442-202ENST00000456737 RANGAP1P46060 587 aaPredicted RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms