RNA–Protein interactions for RNA: ENST00000479441.1

CACNA2D2-206, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA2D2, Length 3,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D2-206ENST00000479441 NISCHQ9Y2I1 1504 aa24.77■■□□□ 1.56
CACNA2D2-206ENST00000479441 SHROOM4Q9ULL8 1493 aa22.83■■□□□ 1.25
CACNA2D2-206ENST00000479441 DCAF8L2P0C7V8 631 aa22.62■■□□□ 1.21
CACNA2D2-206ENST00000479441 SUPT5HO00267 1087 aaKnown RBP22.57■■□□□ 1.2
CACNA2D2-206ENST00000479441 EHMT2Q96KQ7 1210 aa21.5■■□□□ 1.03
CACNA2D2-206ENST00000479441 PCGF6Q9BYE7 350 aa21.38■■□□□ 1.01
CACNA2D2-206ENST00000479441 CHIC1Q5VXU3 224 aa21.24■□□□□ 0.99
CACNA2D2-206ENST00000479441 LOC105371045A0A1W2PR82 267 aa21.22■□□□□ 0.99
CACNA2D2-206ENST00000479441 FAM9AQ8IZU1 332 aaPredicted RBP21.11■□□□□ 0.97
CACNA2D2-206ENST00000479441 PPARGC1BQ86YN6 1023 aaKnown RBP21.09■□□□□ 0.97
CACNA2D2-206ENST00000479441 MYO15BQ96JP2 1530 aa20.97■□□□□ 0.95
CACNA2D2-206ENST00000479441 HRCP23327 699 aa20.8■□□□□ 0.92
CACNA2D2-206ENST00000479441 ZCCHC6Q5VYS8 1495 aaKnown RBP20.79■□□□□ 0.92
CACNA2D2-206ENST00000479441 TTBK1Q5TCY1 1321 aaPredicted RBP20.71■□□□□ 0.91
CACNA2D2-206ENST00000479441 TRIM41Q8WV44 630 aa20.59■□□□□ 0.89
CACNA2D2-206ENST00000479441 TRIM26Q12899 539 aaPredicted RBP20.3■□□□□ 0.84
CACNA2D2-206ENST00000479441 CCDC180Q9P1Z9 1646 aa20.26■□□□□ 0.83
CACNA2D2-206ENST00000479441 ABCC9O60706 1549 aa20.23■□□□□ 0.83
CACNA2D2-206ENST00000479441 RANGAP1P46060 587 aaPredicted RBP20.16■□□□□ 0.82
CACNA2D2-206ENST00000479441 SCRIBQ14160 1630 aa20.15■□□□□ 0.82
CACNA2D2-206ENST00000479441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.07■□□□□ 0.8
CACNA2D2-206ENST00000479441 CCER1Q8TC90 406 aaPredicted RBP19.96■□□□□ 0.79
CACNA2D2-206ENST00000479441 RSF1Q96T23 1441 aaPredicted RBP19.95■□□□□ 0.78
CACNA2D2-206ENST00000479441 PABPN1Q86U42 306 aaKnown RBP eCLIP19.9■□□□□ 0.78
CACNA2D2-206ENST00000479441 UBTFP17480 764 aaKnown RBP19.85■□□□□ 0.77
CACNA2D2-206ENST00000479441 DCAF1Q9Y4B6 1507 aa19.85■□□□□ 0.77
CACNA2D2-206ENST00000479441 CECR2Q9BXF3 1484 aa19.84■□□□□ 0.77
CACNA2D2-206ENST00000479441 RB1CC1Q8TDY2 1594 aa19.75■□□□□ 0.75
CACNA2D2-206ENST00000479441 ZEB1P37275 1124 aaPredicted RBP19.68■□□□□ 0.74
CACNA2D2-206ENST00000479441 YTHDC1Q96MU7 727 aaKnown RBP19.67■□□□□ 0.74
CACNA2D2-206ENST00000479441 HNRNPUL2Q1KMD3 747 aaKnown RBP19.64■□□□□ 0.73
CACNA2D2-206ENST00000479441 MROH2BQ7Z745 1585 aa19.55■□□□□ 0.72
CACNA2D2-206ENST00000479441 SCAF1Q9H7N4 1312 aaKnown RBP19.52■□□□□ 0.71
CACNA2D2-206ENST00000479441 DIEXFQ68CQ4 756 aaKnown RBP19.42■□□□□ 0.7
CACNA2D2-206ENST00000479441 WIZO95785 1651 aa19.42■□□□□ 0.7
CACNA2D2-206ENST00000479441 APLP2Q06481 763 aa19.37■□□□□ 0.69
CACNA2D2-206ENST00000479441 ABCC8Q09428 1581 aa19.36■□□□□ 0.69
CACNA2D2-206ENST00000479441 ITGAEP38570 1179 aa19.35■□□□□ 0.69
CACNA2D2-206ENST00000479441 NEUROD1Q13562 356 aa19.34■□□□□ 0.69
CACNA2D2-206ENST00000479441 CSRNP3Q8WYN3 585 aa19.33■□□□□ 0.68
CACNA2D2-206ENST00000479441 SOGA1O94964 1423 aa19.32■□□□□ 0.68
CACNA2D2-206ENST00000479441 CCDC88BA6NC98 1476 aa19.28■□□□□ 0.68
CACNA2D2-206ENST00000479441 GTF3C3Q9Y5Q9 886 aa19.28■□□□□ 0.68
CACNA2D2-206ENST00000479441 RUSC2Q8N2Y8 1516 aa19.22■□□□□ 0.67
CACNA2D2-206ENST00000479441 ATP1B4Q9UN42 357 aaPredicted RBP19.21■□□□□ 0.67
CACNA2D2-206ENST00000479441 CEP162Q5TB80 1403 aa19.14■□□□□ 0.65
CACNA2D2-206ENST00000479441 ACIN1Q9UKV3 1341 aaKnown RBP19.14■□□□□ 0.65
CACNA2D2-206ENST00000479441 CENPBP07199 599 aaPredicted RBP19.13■□□□□ 0.65
CACNA2D2-206ENST00000479441 NACADO15069 1562 aa19.09■□□□□ 0.65
CACNA2D2-206ENST00000479441 MIER1Q8N108 512 aa19.03■□□□□ 0.64
CACNA2D2-206ENST00000479441 ZNF316A6NFI3 1004 aaPredicted RBP19.02■□□□□ 0.63
CACNA2D2-206ENST00000479441 P3H3Q8IVL6 736 aa18.97■□□□□ 0.63
CACNA2D2-206ENST00000479441 PELP1Q8IZL8 1130 aaKnown RBP18.95■□□□□ 0.62
CACNA2D2-206ENST00000479441 BAZ1AQ9NRL2 1556 aaPredicted RBP18.95■□□□□ 0.62
CACNA2D2-206ENST00000479441 WRNQ14191 1432 aaPredicted RBP eCLIP18.87■□□□□ 0.61
CACNA2D2-206ENST00000479441 TNIKQ9UKE5 1360 aa18.86■□□□□ 0.61
CACNA2D2-206ENST00000479441 CLIP1P30622 1438 aa18.83■□□□□ 0.6
CACNA2D2-206ENST00000479441 HIRIP3Q9BW71 556 aaPredicted RBP18.82■□□□□ 0.6
CACNA2D2-206ENST00000479441 KANK4Q5T7N3 995 aaPredicted RBP18.81■□□□□ 0.6
CACNA2D2-206ENST00000479441 FAM50AQ14320 339 aaKnown RBP18.76■□□□□ 0.59
CACNA2D2-206ENST00000479441 SMARCA2P51531 1590 aa18.75■□□□□ 0.59
CACNA2D2-206ENST00000479441 SMARCA4P51532 1647 aa18.75■□□□□ 0.59
CACNA2D2-206ENST00000479441 TOP2AP11388 1531 aaKnown RBP18.74■□□□□ 0.59
CACNA2D2-206ENST00000479441 GOLGA3Q08378 1498 aa18.73■□□□□ 0.59
CACNA2D2-206ENST00000479441 BCANQ96GW7 911 aa18.71■□□□□ 0.59
CACNA2D2-206ENST00000479441 RAPGEF2Q9Y4G8 1499 aa18.68■□□□□ 0.58
CACNA2D2-206ENST00000479441 ARID3CA6NKF2 412 aa18.67■□□□□ 0.58
CACNA2D2-206ENST00000479441 CNGB1Q14028 1251 aaPredicted RBP18.66■□□□□ 0.58
CACNA2D2-206ENST00000479441 BAZ1BQ9UIG0 1483 aaKnown RBP18.61■□□□□ 0.57
CACNA2D2-206ENST00000479441 KCNH8Q96L42 1107 aa18.6■□□□□ 0.57
CACNA2D2-206ENST00000479441 SIN3AQ96ST3 1273 aa18.56■□□□□ 0.56
CACNA2D2-206ENST00000479441 CEP164Q9UPV0 1460 aa18.55■□□□□ 0.56
CACNA2D2-206ENST00000479441 DDX10Q13206 875 aaKnown RBP18.54■□□□□ 0.56
CACNA2D2-206ENST00000479441 SYNJ1O43426 1573 aa18.52■□□□□ 0.56
CACNA2D2-206ENST00000479441 EEA1Q15075 1411 aa18.51■□□□□ 0.55
CACNA2D2-206ENST00000479441 VPS8Q8N3P4 1428 aa18.49■□□□□ 0.55
CACNA2D2-206ENST00000479441 ATAD2BQ9ULI0 1458 aa18.48■□□□□ 0.55
CACNA2D2-206ENST00000479441 EIF4G1Q04637 1599 aaKnown RBP18.45■□□□□ 0.54
CACNA2D2-206ENST00000479441 UNC13AQ9UPW8 1703 aa18.42■□□□□ 0.54
CACNA2D2-206ENST00000479441 TRIM52Q96A61 297 aa18.42■□□□□ 0.54
CACNA2D2-206ENST00000479441 SENP3-EIF4A1A0A087X0R7 540 aa18.37■□□□□ 0.53
CACNA2D2-206ENST00000479441 BICRAQ9NZM4 1560 aa18.36■□□□□ 0.53
CACNA2D2-206ENST00000479441 CHIC2Q9UKJ5 165 aa18.36■□□□□ 0.53
CACNA2D2-206ENST00000479441 DHX57Q6P158 1386 aaKnown RBP18.33■□□□□ 0.52
CACNA2D2-206ENST00000479441 POLR3GLQ9BT43 218 aa18.32■□□□□ 0.52
CACNA2D2-206ENST00000479441 KIF21BO75037 1637 aa18.31■□□□□ 0.52
CACNA2D2-206ENST00000479441 FKBP8Q14318 412 aa18.27■□□□□ 0.52
CACNA2D2-206ENST00000479441 IRX6P78412 446 aaPredicted RBP18.26■□□□□ 0.51
CACNA2D2-206ENST00000479441 ARAP1Q96P48 1450 aa18.26■□□□□ 0.51
CACNA2D2-206ENST00000479441 KIF27Q86VH2 1401 aa18.26■□□□□ 0.51
CACNA2D2-206ENST00000479441 CUX2O14529 1486 aa18.25■□□□□ 0.51
CACNA2D2-206ENST00000479441 SUPT16HQ9Y5B9 1047 aaKnown RBP18.25■□□□□ 0.51
CACNA2D2-206ENST00000479441 CCNB3Q8WWL7 1395 aa18.25■□□□□ 0.51
CACNA2D2-206ENST00000479441 RAB3GAP2Q9H2M9 1393 aa18.22■□□□□ 0.51
CACNA2D2-206ENST00000479441 RRP7BPQ9NSQ0 103 aa18.21■□□□□ 0.51
CACNA2D2-206ENST00000479441 CARMIL1Q5VZK9 1371 aa18.16■□□□□ 0.5
CACNA2D2-206ENST00000479441 DNAJC5BQ9UF47 199 aa18.16■□□□□ 0.5
CACNA2D2-206ENST00000479441 FOXD1Q16676 465 aa18.14■□□□□ 0.5
CACNA2D2-206ENST00000479441 ZNF326Q5BKZ1 582 aaKnown RBP18.14■□□□□ 0.49
CACNA2D2-206ENST00000479441 NEFLP07196 543 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms