Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
PDE6BP35913 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
PDE6BP35913 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDE6BP35913 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDE6BP35913 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDE6BP35913 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PDE6BP35913 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
PDE6BP35913 PITPNB-201ENST00000320996 2826 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDE6BP35913 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDE6BP35913 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDE6BP35913 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC16.14■□□□□ 0.17
PDE6BP35913 PCTP-202ENST00000325214 1856 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PDE6BP35913 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PDE6BP35913 TCAF1P1-201ENST00000414990 2232 ntBASIC16.14■□□□□ 0.17
PDE6BP35913 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDE6BP35913 AL022323.5-201ENST00000624101 2059 ntBASIC16.14■□□□□ 0.17
PDE6BP35913 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PDE6BP35913 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDE6BP35913 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDE6BP35913 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PDE6BP35913 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDE6BP35913 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PDE6BP35913 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDE6BP35913 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDE6BP35913 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC16.14■□□□□ 0.17
PDE6BP35913 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PDE6BP35913 USP3-204ENST00000540797 5474 ntTSL 2 BASIC16.14■□□□□ 0.17
PDE6BP35913 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PDE6BP35913 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC16.14■□□□□ 0.17
PDE6BP35913 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDE6BP35913 RBP1-201ENST00000232219 898 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PDE6BP35913 EEF1GP3-201ENST00000421044 1288 ntBASIC16.14■□□□□ 0.17
PDE6BP35913 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PDE6BP35913 RN7SL487P-201ENST00000468140 344 ntBASIC16.14■□□□□ 0.17
PDE6BP35913 RANBP6-202ENST00000485372 1000 ntTSL 2 BASIC16.14■□□□□ 0.17
PDE6BP35913 AC110753.1-201ENST00000505711 1022 ntBASIC16.14■□□□□ 0.17
PDE6BP35913 NDUFB1-202ENST00000553514 454 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PDE6BP35913 SALL1-204ENST00000566102 565 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PDE6BP35913 EIF5A-207ENST00000572815 811 ntTSL 5 BASIC16.14■□□□□ 0.17
PDE6BP35913 PAX6-247ENST00000638965 979 ntTSL 5 BASIC16.14■□□□□ 0.17
PDE6BP35913 PEX11B-203ENST00000537888 1632 ntTSL 2 BASIC16.14■□□□□ 0.17
PDE6BP35913 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.14■□□□□ 0.17
PDE6BP35913 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PDE6BP35913 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
PDE6BP35913 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC16.14■□□□□ 0.17
PDE6BP35913 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PDE6BP35913 AC124944.3-201ENST00000607976 1304 ntBASIC16.14■□□□□ 0.17
PDE6BP35913 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDE6BP35913 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PDE6BP35913 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PDE6BP35913 PKMP1-201ENST00000455804 1523 ntBASIC16.14■□□□□ 0.17
PDE6BP35913 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDE6BP35913 AC005154.3-201ENST00000419639 1393 ntBASIC16.13■□□□□ 0.17
PDE6BP35913 FAM156A-223ENST00000623782 1931 ntAPPRIS P2 TSL 3 BASIC16.13■□□□□ 0.17
PDE6BP35913 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDE6BP35913 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
PDE6BP35913 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDE6BP35913 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC16.13■□□□□ 0.17
PDE6BP35913 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDE6BP35913 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDE6BP35913 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDE6BP35913 PMP22-203ENST00000395938 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDE6BP35913 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDE6BP35913 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDE6BP35913 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC16.13■□□□□ 0.17
PDE6BP35913 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDE6BP35913 OR2T34-201ENST00000328782 957 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PDE6BP35913 IGHV1OR15-9-201ENST00000338912 353 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PDE6BP35913 OR2T3-201ENST00000359594 957 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PDE6BP35913 TIMM23B-201ENST00000374098 1142 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PDE6BP35913 AL021407.3-201ENST00000407522 486 ntBASIC16.13■□□□□ 0.17
PDE6BP35913 KRT18P39-201ENST00000415349 1299 ntBASIC16.13■□□□□ 0.17
PDE6BP35913 MRPS16P3-201ENST00000415961 374 ntBASIC16.13■□□□□ 0.17
PDE6BP35913 PHBP11-201ENST00000420550 809 ntBASIC16.13■□□□□ 0.17
PDE6BP35913 IQCJ-202ENST00000451172 885 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDE6BP35913 AL359915.1-201ENST00000457719 898 ntTSL 2 BASIC16.13■□□□□ 0.17
PDE6BP35913 AC007622.1-201ENST00000488371 535 ntBASIC16.13■□□□□ 0.17
PDE6BP35913 VEGFA-225ENST00000523950 954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDE6BP35913 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC16.13■□□□□ 0.17
PDE6BP35913 TIMM23-201ENST00000580018 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDE6BP35913 AC090616.6-202ENST00000583601 1088 ntBASIC16.13■□□□□ 0.17
PDE6BP35913 SOX2-OT-228ENST00000597828 864 ntTSL 5 BASIC16.13■□□□□ 0.17
PDE6BP35913 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDE6BP35913 SLC6A6P1-201ENST00000413933 1850 ntBASIC16.13■□□□□ 0.17
PDE6BP35913 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDE6BP35913 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDE6BP35913 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
PDE6BP35913 CXorf40A-203ENST00000422892 1536 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
PDE6BP35913 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PDE6BP35913 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDE6BP35913 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDE6BP35913 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDE6BP35913 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDE6BP35913 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDE6BP35913 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC16.13■□□□□ 0.17
PDE6BP35913 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PDE6BP35913 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDE6BP35913 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC16.13■□□□□ 0.17
PDE6BP35913 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDE6BP35913 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms